RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 FOXN1O15353 648 aa23.11■■□□□ 1.29
YIPF3-208ENST00000490447 TMC4Q7Z404 712 aa23.11■■□□□ 1.29
YIPF3-208ENST00000490447 ZNF428Q96B54 188 aa23.11■■□□□ 1.29
YIPF3-208ENST00000490447 CFAP44Q96MT7 982 aa23.11■■□□□ 1.29
YIPF3-208ENST00000490447 ADARB2Q9NS39 739 aaKnown RBP23.11■■□□□ 1.29
YIPF3-208ENST00000490447 KIAA2012Q0VF49 1180 aa23.1■■□□□ 1.29
YIPF3-208ENST00000490447 HYPKQ9NX55 129 aa23.1■■□□□ 1.29
YIPF3-208ENST00000490447 GPRC5DQ9NZD1 345 aa23.1■■□□□ 1.29
YIPF3-208ENST00000490447 CXCL9Q07325 125 aa23.09■■□□□ 1.29
YIPF3-208ENST00000490447 CIAPIN1Q6FI81 312 aa23.09■■□□□ 1.29
YIPF3-208ENST00000490447 LAMB2P55268 1798 aa23.09■■□□□ 1.29
YIPF3-208ENST00000490447 CTCFP49711 727 aaPredicted RBP23.08■■□□□ 1.29
YIPF3-208ENST00000490447 DUSP27Q5VZP5 1158 aa23.08■■□□□ 1.29
YIPF3-208ENST00000490447 PAXIP1Q6ZW49 1069 aaPredicted RBP23.08■■□□□ 1.29
YIPF3-208ENST00000490447 BCL2L13Q9BXK5 485 aa23.08■■□□□ 1.29
YIPF3-208ENST00000490447 ATP5J2-PTCD1G3V325 749 aa23.08■■□□□ 1.28
YIPF3-208ENST00000490447 GMPSP49915 693 aaPredicted RBP23.08■■□□□ 1.28
YIPF3-208ENST00000490447 TNIP1Q15025 636 aa23.08■■□□□ 1.28
YIPF3-208ENST00000490447 FAM89AQ96GI7 184 aa23.08■■□□□ 1.28
YIPF3-208ENST00000490447 WDR33Q9C0J8 1336 aaKnown RBP23.07■■□□□ 1.28
YIPF3-208ENST00000490447 ISCA1Q9BUE6 129 aa23.07■■□□□ 1.28
YIPF3-208ENST00000490447 CDHR2Q9BYE9 1310 aa23.07■■□□□ 1.28
YIPF3-208ENST00000490447 PRDM10Q9NQV6 1147 aa23.07■■□□□ 1.28
YIPF3-208ENST00000490447 MBIPQ9NS73 344 aa23.07■■□□□ 1.28
YIPF3-208ENST00000490447 RAD17O75943 681 aa23.06■■□□□ 1.28
YIPF3-208ENST00000490447 MAP2K1Q02750 393 aaPredicted RBP23.06■■□□□ 1.28
YIPF3-208ENST00000490447 CALD1Q05682 793 aaKnown RBP23.06■■□□□ 1.28
YIPF3-208ENST00000490447 PRKRIP1Q9H875 184 aaPredicted RBP23.06■■□□□ 1.28
YIPF3-208ENST00000490447 WBP1LQ9NX94 342 aa23.06■■□□□ 1.28
YIPF3-208ENST00000490447 GOLGA2Q08379 1002 aa23.05■■□□□ 1.28
YIPF3-208ENST00000490447 RTL5Q5HYW3 569 aaPredicted RBP23.05■■□□□ 1.28
YIPF3-208ENST00000490447 RIC3Q7Z5B4 369 aa23.05■■□□□ 1.28
YIPF3-208ENST00000490447 TRAF5O00463 557 aa23.04■■□□□ 1.28
YIPF3-208ENST00000490447 ECE1P42892 770 aa23.04■■□□□ 1.28
YIPF3-208ENST00000490447 FMR1Q06787 632 aaKnown RBP eCLIP23.04■■□□□ 1.28
YIPF3-208ENST00000490447 SF3B3Q15393 1217 aaKnown RBP23.04■■□□□ 1.28
YIPF3-208ENST00000490447 GNAI1P63096 354 aa23.03■■□□□ 1.28
YIPF3-208ENST00000490447 GRM1Q13255 1194 aa23.03■■□□□ 1.28
YIPF3-208ENST00000490447 WASHC4Q2M389 1173 aa23.03■■□□□ 1.28
YIPF3-208ENST00000490447 CELF1Q92879 486 aaKnown RBP23.03■■□□□ 1.28
YIPF3-208ENST00000490447 IFT57Q9NWB7 429 aa23.03■■□□□ 1.28
YIPF3-208ENST00000490447 NSFL1CQ9UNZ2 370 aaKnown RBP23.03■■□□□ 1.28
YIPF3-208ENST00000490447 IRS4O14654 1257 aaPredicted RBP23.02■■□□□ 1.28
YIPF3-208ENST00000490447 APAF1O14727 1248 aa23.02■■□□□ 1.28
YIPF3-208ENST00000490447 DDX60Q8IY21 1712 aaKnown RBP23.01■■□□□ 1.27
YIPF3-208ENST00000490447 C6orf229H3BNL8 230 aa23.01■■□□□ 1.27
YIPF3-208ENST00000490447 H7C1D1 291 aa23.01■■□□□ 1.27
YIPF3-208ENST00000490447 HSP90B1P14625 803 aaKnown RBP23.01■■□□□ 1.27
YIPF3-208ENST00000490447 LBX1P52954 281 aa23.01■■□□□ 1.27
YIPF3-208ENST00000490447 TRIM28Q13263 835 aaKnown RBP23.01■■□□□ 1.27
YIPF3-208ENST00000490447 CAPNS2Q96L46 248 aa23.01■■□□□ 1.27
YIPF3-208ENST00000490447 BEGAINQ9BUH8 593 aa23.01■■□□□ 1.27
YIPF3-208ENST00000490447 ZNF853P0CG23 659 aa23■■□□□ 1.27
YIPF3-208ENST00000490447 CST9Q5W186 159 aa23■■□□□ 1.27
YIPF3-208ENST00000490447 ZC3H15Q8WU90 426 aaKnown RBP23■■□□□ 1.27
YIPF3-208ENST00000490447 EYA3Q99504 573 aa23■■□□□ 1.27
YIPF3-208ENST00000490447 CNOT7Q9UIV1 285 aaKnown RBP23■■□□□ 1.27
YIPF3-208ENST00000490447 TLL2Q9Y6L7 1015 aa23■■□□□ 1.27
YIPF3-208ENST00000490447 DUOX1Q9NRD9 1551 aa23■■□□□ 1.27
YIPF3-208ENST00000490447 LRRC37AA6NMS7 1700 aa22.99■■□□□ 1.27
YIPF3-208ENST00000490447 YDJCA8MPS7 323 aa22.99■■□□□ 1.27
YIPF3-208ENST00000490447 ELL2O00472 640 aaPredicted RBP22.99■■□□□ 1.27
YIPF3-208ENST00000490447 CELF2O95319 508 aaKnown RBP22.99■■□□□ 1.27
YIPF3-208ENST00000490447 CYP4F22Q6NT55 531 aa22.99■■□□□ 1.27
YIPF3-208ENST00000490447 ZBTB38Q8NAP3 1195 aaPredicted RBP22.99■■□□□ 1.27
YIPF3-208ENST00000490447 CHMP4AQ9BY43 222 aa22.99■■□□□ 1.27
YIPF3-208ENST00000490447 RIMBP2O15034 1052 aa22.98■■□□□ 1.27
YIPF3-208ENST00000490447 MICALL2Q8IY33 904 aa22.98■■□□□ 1.27
YIPF3-208ENST00000490447 GPR101Q96P66 508 aaPredicted RBP22.98■■□□□ 1.27
YIPF3-208ENST00000490447 MYD88Q99836 296 aa22.98■■□□□ 1.27
YIPF3-208ENST00000490447 GLIS2Q9BZE0 524 aaPredicted RBP22.98■■□□□ 1.27
YIPF3-208ENST00000490447 PHAXQ9H814 394 aaKnown RBP22.98■■□□□ 1.27
YIPF3-208ENST00000490447 DBNDD1Q9H9R9 158 aa22.98■■□□□ 1.27
YIPF3-208ENST00000490447 TAF1P21675 1872 aa22.97■■□□□ 1.27
YIPF3-208ENST00000490447 GPSM2P81274 684 aa22.97■■□□□ 1.27
YIPF3-208ENST00000490447 ZNF408Q9H9D4 720 aa22.97■■□□□ 1.27
YIPF3-208ENST00000490447 PGAP2Q9UHJ9 254 aa22.97■■□□□ 1.27
YIPF3-208ENST00000490447 DDX58O95786 925 aaKnown RBP22.96■■□□□ 1.27
YIPF3-208ENST00000490447 HSPA8P11142 646 aaKnown RBP22.96■■□□□ 1.27
YIPF3-208ENST00000490447 RPS8P62241 208 aaKnown RBP22.96■■□□□ 1.27
YIPF3-208ENST00000490447 CDC37L1Q7L3B6 337 aa22.96■■□□□ 1.27
YIPF3-208ENST00000490447 TRPM4Q8TD43 1214 aa22.96■■□□□ 1.27
YIPF3-208ENST00000490447 POLLQ9UGP5 575 aa22.96■■□□□ 1.27
YIPF3-208ENST00000490447 ZBTB12Q9Y330 459 aaPredicted RBP22.96■■□□□ 1.27
YIPF3-208ENST00000490447 TRPM7Q96QT4 1865 aa22.95■■□□□ 1.27
YIPF3-208ENST00000490447 PSMD14O00487 310 aa22.95■■□□□ 1.26
YIPF3-208ENST00000490447 HIRAP54198 1017 aaPredicted RBP22.95■■□□□ 1.26
YIPF3-208ENST00000490447 SAPCD2Q86UD0 394 aa22.95■■□□□ 1.26
YIPF3-208ENST00000490447 CCDC191Q8NCU4 936 aa22.95■■□□□ 1.26
YIPF3-208ENST00000490447 DPF2Q92785 391 aa22.95■■□□□ 1.26
YIPF3-208ENST00000490447 ECE2O60344 883 aa22.94■■□□□ 1.26
YIPF3-208ENST00000490447 CCDC152Q4G0S7 254 aa22.94■■□□□ 1.26
YIPF3-208ENST00000490447 CCDC30Q5VVM6 783 aa22.94■■□□□ 1.26
YIPF3-208ENST00000490447 SHTN1A0MZ66 631 aa22.93■■□□□ 1.26
YIPF3-208ENST00000490447 G3V3G9 751 aa22.93■■□□□ 1.26
YIPF3-208ENST00000490447 RPS12P25398 132 aaKnown RBP22.93■■□□□ 1.26
YIPF3-208ENST00000490447 DOK7Q18PE1 504 aa22.93■■□□□ 1.26
YIPF3-208ENST00000490447 DCAF8Q5TAQ9 597 aa22.93■■□□□ 1.26
YIPF3-208ENST00000490447 TBC1D16Q8TBP0 767 aa22.93■■□□□ 1.26
YIPF3-208ENST00000490447 ZC3H12CQ9C0D7 883 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms