RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 ELL2O00472 640 aaPredicted RBP17.39■□□□□ 0.37
LINC00173-204ENST00000489452 APAF1O14727 1248 aa17.39■□□□□ 0.37
LINC00173-204ENST00000489452 GRAPQ13588 217 aa17.39■□□□□ 0.37
LINC00173-204ENST00000489452 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
LINC00173-204ENST00000489452 RTFDC1Q9BY42 306 aaPredicted RBP17.39■□□□□ 0.37
LINC00173-204ENST00000489452 VPS33BQ9H267 617 aa17.39■□□□□ 0.37
LINC00173-204ENST00000489452 MBIPQ9NS73 344 aa17.39■□□□□ 0.37
LINC00173-204ENST00000489452 GMPSP49915 693 aaPredicted RBP17.38■□□□□ 0.37
LINC00173-204ENST00000489452 USP50Q70EL3 339 aaPredicted RBP17.38■□□□□ 0.37
LINC00173-204ENST00000489452 AIDAQ96BJ3 306 aa17.38■□□□□ 0.37
LINC00173-204ENST00000489452 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
LINC00173-204ENST00000489452 HYPKQ9NX55 129 aa17.38■□□□□ 0.37
LINC00173-204ENST00000489452 GPRC5DQ9NZD1 345 aa17.38■□□□□ 0.37
LINC00173-204ENST00000489452 HOXB7P09629 217 aa17.37■□□□□ 0.37
LINC00173-204ENST00000489452 GRM1Q13255 1194 aa17.37■□□□□ 0.37
LINC00173-204ENST00000489452 CIAPIN1Q6FI81 312 aa17.37■□□□□ 0.37
LINC00173-204ENST00000489452 PAXIP1Q6ZW49 1069 aaPredicted RBP17.37■□□□□ 0.37
LINC00173-204ENST00000489452 ISCA1Q9BUE6 129 aa17.37■□□□□ 0.37
LINC00173-204ENST00000489452 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
LINC00173-204ENST00000489452 ADARB2Q9NS39 739 aaKnown RBP17.37■□□□□ 0.37
LINC00173-204ENST00000489452 RASSF10A6NK89 507 aa17.36■□□□□ 0.37
LINC00173-204ENST00000489452 KIAA2012Q0VF49 1180 aa17.36■□□□□ 0.37
LINC00173-204ENST00000489452 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
LINC00173-204ENST00000489452 CELF1Q92879 486 aaKnown RBP17.36■□□□□ 0.37
LINC00173-204ENST00000489452 NSFL1CQ9UNZ2 370 aaKnown RBP17.36■□□□□ 0.37
LINC00173-204ENST00000489452 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
LINC00173-204ENST00000489452 RIMBP2O15034 1052 aa17.35■□□□□ 0.37
LINC00173-204ENST00000489452 TNIP1Q15025 636 aa17.35■□□□□ 0.37
LINC00173-204ENST00000489452 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
LINC00173-204ENST00000489452 WDR33Q9C0J8 1336 aaKnown RBP17.35■□□□□ 0.37
LINC00173-204ENST00000489452 ADAMTSL1Q8N6G6 1762 aa17.35■□□□□ 0.37
LINC00173-204ENST00000489452 C6orf229H3BNL8 230 aa17.34■□□□□ 0.37
LINC00173-204ENST00000489452 IRS4O14654 1257 aaPredicted RBP17.34■□□□□ 0.37
LINC00173-204ENST00000489452 TAF1P21675 1872 aa17.34■□□□□ 0.37
LINC00173-204ENST00000489452 CTCFP49711 727 aaPredicted RBP17.34■□□□□ 0.37
LINC00173-204ENST00000489452 CST9Q5W186 159 aa17.34■□□□□ 0.37
LINC00173-204ENST00000489452 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
LINC00173-204ENST00000489452 WBP1LQ9NX94 342 aa17.34■□□□□ 0.37
LINC00173-204ENST00000489452 SHTN1A0MZ66 631 aa17.33■□□□□ 0.36
LINC00173-204ENST00000489452 YDJCA8MPS7 323 aa17.33■□□□□ 0.36
LINC00173-204ENST00000489452 ZNF853P0CG23 659 aa17.33■□□□□ 0.36
LINC00173-204ENST00000489452 LBX1P52954 281 aa17.33■□□□□ 0.36
LINC00173-204ENST00000489452 GNAI1P63096 354 aa17.33■□□□□ 0.36
LINC00173-204ENST00000489452 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
LINC00173-204ENST00000489452 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
LINC00173-204ENST00000489452 WASHC4Q2M389 1173 aa17.33■□□□□ 0.36
LINC00173-204ENST00000489452 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
LINC00173-204ENST00000489452 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.36
LINC00173-204ENST00000489452 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
LINC00173-204ENST00000489452 GPSM2P81274 684 aa17.32■□□□□ 0.36
LINC00173-204ENST00000489452 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
LINC00173-204ENST00000489452 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
LINC00173-204ENST00000489452 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
LINC00173-204ENST00000489452 CAPNS2Q96L46 248 aa17.32■□□□□ 0.36
LINC00173-204ENST00000489452 MYD88Q99836 296 aa17.32■□□□□ 0.36
LINC00173-204ENST00000489452 DBNDD1Q9H9R9 158 aa17.32■□□□□ 0.36
LINC00173-204ENST00000489452 IFT57Q9NWB7 429 aa17.32■□□□□ 0.36
LINC00173-204ENST00000489452 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
LINC00173-204ENST00000489452 LAMB2P55268 1798 aa17.31■□□□□ 0.36
LINC00173-204ENST00000489452 ANKRD36CQ5JPF3 1778 aa17.31■□□□□ 0.36
LINC00173-204ENST00000489452 HIRAP54198 1017 aaPredicted RBP17.31■□□□□ 0.36
LINC00173-204ENST00000489452 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
LINC00173-204ENST00000489452 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
LINC00173-204ENST00000489452 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
LINC00173-204ENST00000489452 PRDM10Q9NQV6 1147 aa17.31■□□□□ 0.36
LINC00173-204ENST00000489452 POLLQ9UGP5 575 aa17.31■□□□□ 0.36
LINC00173-204ENST00000489452 H7C1D1 291 aa17.3■□□□□ 0.36
LINC00173-204ENST00000489452 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
LINC00173-204ENST00000489452 MAP2K1Q02750 393 aaPredicted RBP17.3■□□□□ 0.36
LINC00173-204ENST00000489452 CALD1Q05682 793 aaKnown RBP17.3■□□□□ 0.36
LINC00173-204ENST00000489452 TRPM4Q8TD43 1214 aa17.3■□□□□ 0.36
LINC00173-204ENST00000489452 CCDC85AQ96PX6 553 aaPredicted RBP17.3■□□□□ 0.36
LINC00173-204ENST00000489452 ZNF408Q9H9D4 720 aa17.3■□□□□ 0.36
LINC00173-204ENST00000489452 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
LINC00173-204ENST00000489452 KCNQ5Q9NR82 932 aa17.3■□□□□ 0.36
LINC00173-204ENST00000489452 PSMD14O00487 310 aa17.29■□□□□ 0.36
LINC00173-204ENST00000489452 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
LINC00173-204ENST00000489452 ZBTB38Q8NAP3 1195 aaPredicted RBP17.29■□□□□ 0.36
LINC00173-204ENST00000489452 AOC2O75106 756 aa17.28■□□□□ 0.36
LINC00173-204ENST00000489452 ECE1P42892 770 aa17.28■□□□□ 0.36
LINC00173-204ENST00000489452 RBM26Q5T8P6 1007 aaKnown RBP17.28■□□□□ 0.36
LINC00173-204ENST00000489452 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
LINC00173-204ENST00000489452 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
LINC00173-204ENST00000489452 USP48Q86UV5 1035 aa17.28■□□□□ 0.36
LINC00173-204ENST00000489452 HSPA8P11142 646 aaKnown RBP17.27■□□□□ 0.36
LINC00173-204ENST00000489452 TBC1D10BQ4KMP7 808 aaPredicted RBP17.27■□□□□ 0.36
LINC00173-204ENST00000489452 CCDC184Q52MB2 194 aa17.27■□□□□ 0.36
LINC00173-204ENST00000489452 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
LINC00173-204ENST00000489452 TBC1D16Q8TBP0 767 aa17.27■□□□□ 0.36
LINC00173-204ENST00000489452 EYA3Q99504 573 aa17.27■□□□□ 0.36
LINC00173-204ENST00000489452 ZC3H12CQ9C0D7 883 aaKnown RBP17.27■□□□□ 0.36
LINC00173-204ENST00000489452 ANKIB1Q9P2G1 1089 aa17.27■□□□□ 0.36
LINC00173-204ENST00000489452 PGAP2Q9UHJ9 254 aa17.27■□□□□ 0.36
LINC00173-204ENST00000489452 TLL2Q9Y6L7 1015 aa17.27■□□□□ 0.36
LINC00173-204ENST00000489452 G3V3G9 751 aa17.26■□□□□ 0.35
LINC00173-204ENST00000489452 ECE2O60344 883 aa17.26■□□□□ 0.35
LINC00173-204ENST00000489452 DCAF8Q5TAQ9 597 aa17.26■□□□□ 0.35
LINC00173-204ENST00000489452 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
LINC00173-204ENST00000489452 CDC37L1Q7L3B6 337 aa17.26■□□□□ 0.35
LINC00173-204ENST00000489452 ZC3H15Q8WU90 426 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms