RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 GPBP1L1Q9HC44 474 aaPredicted RBP20.02■□□□□ 0.8
LMX1A-204ENST00000489443 SMC4Q9NTJ3 1288 aa20.02■□□□□ 0.8
LMX1A-204ENST00000489443 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.79
LMX1A-204ENST00000489443 H7C1W4 665 aa20.01■□□□□ 0.79
LMX1A-204ENST00000489443 CT47B1P0C2W7 299 aaPredicted RBP20.01■□□□□ 0.79
LMX1A-204ENST00000489443 FKBP4Q02790 459 aaKnown RBP eCLIP20.01■□□□□ 0.79
LMX1A-204ENST00000489443 BEND3Q5T5X7 828 aa20.01■□□□□ 0.79
LMX1A-204ENST00000489443 CCDC85AQ96PX6 553 aaPredicted RBP20.01■□□□□ 0.79
LMX1A-204ENST00000489443 ATP6V0A2Q9Y487 856 aa20.01■□□□□ 0.79
LMX1A-204ENST00000489443 CCDC152Q4G0S7 254 aa20■□□□□ 0.79
LMX1A-204ENST00000489443 ZNF277Q9NRM2 450 aaPredicted RBP20■□□□□ 0.79
LMX1A-204ENST00000489443 CELF1Q92879 486 aaKnown RBP19.99■□□□□ 0.79
LMX1A-204ENST00000489443 SEC31BQ9NQW1 1179 aa19.99■□□□□ 0.79
LMX1A-204ENST00000489443 DICER1Q9UPY3 1922 aaKnown RBP19.99■□□□□ 0.79
LMX1A-204ENST00000489443 GRIPAP1Q4V328 841 aa19.98■□□□□ 0.79
LMX1A-204ENST00000489443 SP8Q8IXZ3 490 aa19.98■□□□□ 0.79
LMX1A-204ENST00000489443 PTPRCP08575 1304 aa19.98■□□□□ 0.79
LMX1A-204ENST00000489443 CTSWP56202 376 aa19.97■□□□□ 0.79
LMX1A-204ENST00000489443 PSMD1Q99460 953 aa19.97■□□□□ 0.79
LMX1A-204ENST00000489443 SRCIN1Q9C0H9 1055 aa19.97■□□□□ 0.79
LMX1A-204ENST00000489443 MYH3P11055 1940 aa19.97■□□□□ 0.79
LMX1A-204ENST00000489443 TIAM2Q8IVF5 1701 aa19.96■□□□□ 0.79
LMX1A-204ENST00000489443 RPS8P62241 208 aaKnown RBP19.96■□□□□ 0.79
LMX1A-204ENST00000489443 TMC4Q7Z404 712 aa19.96■□□□□ 0.79
LMX1A-204ENST00000489443 ZBED9Q6R2W3 1325 aa19.96■□□□□ 0.79
LMX1A-204ENST00000489443 ZC3H4Q9UPT8 1303 aaKnown RBP19.96■□□□□ 0.79
LMX1A-204ENST00000489443 SNED1Q8TER0 1413 aa19.95■□□□□ 0.78
LMX1A-204ENST00000489443 ALDH1L1O75891 902 aa19.95■□□□□ 0.78
LMX1A-204ENST00000489443 IARSP41252 1262 aaKnown RBP19.95■□□□□ 0.78
LMX1A-204ENST00000489443 RARSP54136 660 aaKnown RBP19.95■□□□□ 0.78
LMX1A-204ENST00000489443 CASP7P55210 303 aa19.95■□□□□ 0.78
LMX1A-204ENST00000489443 MPNDQ8N594 471 aa19.95■□□□□ 0.78
LMX1A-204ENST00000489443 TTLL11Q8NHH1 800 aa19.95■□□□□ 0.78
LMX1A-204ENST00000489443 C9orf78Q9NZ63 289 aaPredicted RBP19.95■□□□□ 0.78
LMX1A-204ENST00000489443 KDM2BQ8NHM5 1336 aa19.95■□□□□ 0.78
LMX1A-204ENST00000489443 COL4A1P02462 1669 aa19.94■□□□□ 0.78
LMX1A-204ENST00000489443 DPP8Q6V1X1 898 aaPredicted RBP19.94■□□□□ 0.78
LMX1A-204ENST00000489443 NOB1Q9ULX3 412 aaKnown RBP19.94■□□□□ 0.78
LMX1A-204ENST00000489443 GRM8O00222 908 aa19.93■□□□□ 0.78
LMX1A-204ENST00000489443 PLA2G12BQ9BX93 195 aa19.93■□□□□ 0.78
LMX1A-204ENST00000489443 GREM2Q9H772 168 aa19.93■□□□□ 0.78
LMX1A-204ENST00000489443 NMRK2Q9NPI5 230 aa19.93■□□□□ 0.78
LMX1A-204ENST00000489443 GLTPD2A6NH11 291 aa19.92■□□□□ 0.78
LMX1A-204ENST00000489443 DPY19L2Q6NUT2 758 aa19.92■□□□□ 0.78
LMX1A-204ENST00000489443 ANKRD18AQ8IVF6 992 aa19.92■□□□□ 0.78
LMX1A-204ENST00000489443 LARGE2Q8N3Y3 721 aa19.92■□□□□ 0.78
LMX1A-204ENST00000489443 SUPT20HQ8NEM7 779 aa19.91■□□□□ 0.78
LMX1A-204ENST00000489443 JDP2Q8WYK2 163 aa19.91■□□□□ 0.78
LMX1A-204ENST00000489443 CDC5LQ99459 802 aaKnown RBP19.91■□□□□ 0.78
LMX1A-204ENST00000489443 NSFL1CQ9UNZ2 370 aaKnown RBP19.91■□□□□ 0.78
LMX1A-204ENST00000489443 PPIP5K2O43314 1243 aa19.9■□□□□ 0.78
LMX1A-204ENST00000489443 BRPF1P55201 1214 aaPredicted RBP19.9■□□□□ 0.78
LMX1A-204ENST00000489443 RTFDC1Q9BY42 306 aaPredicted RBP19.9■□□□□ 0.78
LMX1A-204ENST00000489443 RRAGCQ9HB90 399 aa19.9■□□□□ 0.78
LMX1A-204ENST00000489443 LRRC37AA6NMS7 1700 aa19.89■□□□□ 0.77
LMX1A-204ENST00000489443 CSF1RP07333 972 aa19.89■□□□□ 0.77
LMX1A-204ENST00000489443 GPSM2P81274 684 aa19.89■□□□□ 0.77
LMX1A-204ENST00000489443 FOXO4P98177 505 aa19.89■□□□□ 0.77
LMX1A-204ENST00000489443 AOC3Q16853 763 aa19.89■□□□□ 0.77
LMX1A-204ENST00000489443 FAM161AQ3B820 660 aa19.89■□□□□ 0.77
LMX1A-204ENST00000489443 RTL9Q8NET4 1388 aa19.89■□□□□ 0.77
LMX1A-204ENST00000489443 API5Q9BZZ5 524 aaKnown RBP19.89■□□□□ 0.77
LMX1A-204ENST00000489443 CHMP3Q9Y3E7 222 aa19.89■□□□□ 0.77
LMX1A-204ENST00000489443 C6orf229H3BNL8 230 aa19.88■□□□□ 0.77
LMX1A-204ENST00000489443 KIF3CO14782 793 aa19.88■□□□□ 0.77
LMX1A-204ENST00000489443 BCAR3O75815 825 aa19.88■□□□□ 0.77
LMX1A-204ENST00000489443 NBPF7P0C2Y1 421 aaPredicted RBP19.88■□□□□ 0.77
LMX1A-204ENST00000489443 ITGA6P23229 1130 aa19.88■□□□□ 0.77
LMX1A-204ENST00000489443 EPHA10Q5JZY3 1008 aa19.88■□□□□ 0.77
LMX1A-204ENST00000489443 ANKIB1Q9P2G1 1089 aa19.88■□□□□ 0.77
LMX1A-204ENST00000489443 SPEF2Q9C093 1822 aa19.88■□□□□ 0.77
LMX1A-204ENST00000489443 KIF16BQ96L93 1317 aa19.87■□□□□ 0.77
LMX1A-204ENST00000489443 DDNO94850 711 aaPredicted RBP19.87■□□□□ 0.77
LMX1A-204ENST00000489443 LMBR1LQ6UX01 489 aa19.87■□□□□ 0.77
LMX1A-204ENST00000489443 NIM1KQ8IY84 436 aa19.87■□□□□ 0.77
LMX1A-204ENST00000489443 COL4A5P29400 1685 aa19.87■□□□□ 0.77
LMX1A-204ENST00000489443 ZNF541Q9H0D2 1346 aa19.86■□□□□ 0.77
LMX1A-204ENST00000489443 FZD9O00144 591 aa19.86■□□□□ 0.77
LMX1A-204ENST00000489443 IGHMBP2P38935 993 aaKnown RBP19.86■□□□□ 0.77
LMX1A-204ENST00000489443 FRAT1Q92837 279 aaPredicted RBP19.86■□□□□ 0.77
LMX1A-204ENST00000489443 SUCLG2Q96I99 432 aa19.86■□□□□ 0.77
LMX1A-204ENST00000489443 VPS33BQ9H267 617 aa19.86■□□□□ 0.77
LMX1A-204ENST00000489443 POLLQ9UGP5 575 aa19.86■□□□□ 0.77
LMX1A-204ENST00000489443 UTYO14607 1347 aa19.85■□□□□ 0.77
LMX1A-204ENST00000489443 ANKRD18BA2A2Z9 1011 aa19.85■□□□□ 0.77
LMX1A-204ENST00000489443 IPO8O15397 1037 aaKnown RBP19.85■□□□□ 0.77
LMX1A-204ENST00000489443 CCT4P50991 539 aaKnown RBP19.85■□□□□ 0.77
LMX1A-204ENST00000489443 WASHC4Q2M389 1173 aa19.85■□□□□ 0.77
LMX1A-204ENST00000489443 C16orf71Q8IYS4 520 aaPredicted RBP19.85■□□□□ 0.77
LMX1A-204ENST00000489443 ARHGAP45Q92619 1136 aa19.85■□□□□ 0.77
LMX1A-204ENST00000489443 USP44Q9H0E7 712 aa19.85■□□□□ 0.77
LMX1A-204ENST00000489443 BSDC1Q9NW68 430 aaPredicted RBP19.85■□□□□ 0.77
LMX1A-204ENST00000489443 DUOX1Q9NRD9 1551 aa19.84■□□□□ 0.77
LMX1A-204ENST00000489443 RIMBP2O15034 1052 aa19.84■□□□□ 0.77
LMX1A-204ENST00000489443 UFL1O94874 794 aa19.84■□□□□ 0.77
LMX1A-204ENST00000489443 VEGFAP15692 232 aaPredicted RBP19.84■□□□□ 0.77
LMX1A-204ENST00000489443 EIF6P56537 245 aaKnown RBP19.84■□□□□ 0.77
LMX1A-204ENST00000489443 C1QTNF8P60827 252 aa19.84■□□□□ 0.77
LMX1A-204ENST00000489443 KIAA2012Q0VF49 1180 aa19.84■□□□□ 0.77
LMX1A-204ENST00000489443 IFIT5Q13325 482 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms