RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 LRRC37AA6NMS7 1700 aa23.68■■□□□ 1.38
ATG9A-222ENST00000488833 ITGBL1O95965 494 aaPredicted RBP23.68■■□□□ 1.38
ATG9A-222ENST00000488833 SCNN1DP51172 638 aa23.68■■□□□ 1.38
ATG9A-222ENST00000488833 RTL5Q5HYW3 569 aaPredicted RBP23.68■■□□□ 1.38
ATG9A-222ENST00000488833 MAP1SQ66K74 1059 aaPredicted RBP23.68■■□□□ 1.38
ATG9A-222ENST00000488833 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
ATG9A-222ENST00000488833 CCDC184Q52MB2 194 aa23.67■■□□□ 1.38
ATG9A-222ENST00000488833 PHAXQ9H814 394 aaKnown RBP23.67■■□□□ 1.38
ATG9A-222ENST00000488833 HSPA1AP0DMV8 641 aaKnown RBP23.66■■□□□ 1.38
ATG9A-222ENST00000488833 HSPA1BP0DMV9 641 aaKnown RBP23.66■■□□□ 1.38
ATG9A-222ENST00000488833 EPS15P42566 896 aa23.66■■□□□ 1.38
ATG9A-222ENST00000488833 TMC4Q7Z404 712 aa23.66■■□□□ 1.38
ATG9A-222ENST00000488833 C8orf58Q8NAV2 365 aa23.66■■□□□ 1.38
ATG9A-222ENST00000488833 ZNRF3Q9ULT6 936 aa23.66■■□□□ 1.38
ATG9A-222ENST00000488833 DUOX1Q9NRD9 1551 aa23.65■■□□□ 1.38
ATG9A-222ENST00000488833 TMEM88BA6NKF7 163 aa23.65■■□□□ 1.38
ATG9A-222ENST00000488833 KIAA2012Q0VF49 1180 aa23.65■■□□□ 1.38
ATG9A-222ENST00000488833 TRIM28Q13263 835 aaKnown RBP23.65■■□□□ 1.38
ATG9A-222ENST00000488833 CNTROBQ8N137 903 aa23.65■■□□□ 1.38
ATG9A-222ENST00000488833 CNTNAP1P78357 1384 aa23.65■■□□□ 1.38
ATG9A-222ENST00000488833 IRS4O14654 1257 aaPredicted RBP23.64■■□□□ 1.37
ATG9A-222ENST00000488833 SF3B3Q15393 1217 aaKnown RBP23.64■■□□□ 1.37
ATG9A-222ENST00000488833 CXCL9Q07325 125 aa23.63■■□□□ 1.37
ATG9A-222ENST00000488833 CELF1Q92879 486 aaKnown RBP23.63■■□□□ 1.37
ATG9A-222ENST00000488833 MYD88Q99836 296 aa23.63■■□□□ 1.37
ATG9A-222ENST00000488833 COL13A1Q5TAT6 717 aaPredicted RBP23.62■■□□□ 1.37
ATG9A-222ENST00000488833 CCDC30Q5VVM6 783 aa23.62■■□□□ 1.37
ATG9A-222ENST00000488833 COL4A1P02462 1669 aa23.62■■□□□ 1.37
ATG9A-222ENST00000488833 ZEB1P37275 1124 aaPredicted RBP23.61■■□□□ 1.37
ATG9A-222ENST00000488833 USP50Q70EL3 339 aaPredicted RBP23.61■■□□□ 1.37
ATG9A-222ENST00000488833 ZBTB38Q8NAP3 1195 aaPredicted RBP23.61■■□□□ 1.37
ATG9A-222ENST00000488833 TSR2Q969E8 191 aaKnown RBP23.61■■□□□ 1.37
ATG9A-222ENST00000488833 CHMP4AQ9BY43 222 aa23.61■■□□□ 1.37
ATG9A-222ENST00000488833 GPRC5DQ9NZD1 345 aa23.61■■□□□ 1.37
ATG9A-222ENST00000488833 DDX58O95786 925 aaKnown RBP23.6■■□□□ 1.37
ATG9A-222ENST00000488833 GMPSP49915 693 aaPredicted RBP23.6■■□□□ 1.37
ATG9A-222ENST00000488833 CIAPIN1Q6FI81 312 aa23.6■■□□□ 1.37
ATG9A-222ENST00000488833 TSPYL6Q8N831 410 aa23.6■■□□□ 1.37
ATG9A-222ENST00000488833 RAD17O75943 681 aa23.59■■□□□ 1.37
ATG9A-222ENST00000488833 ADARB2Q9NS39 739 aaKnown RBP23.59■■□□□ 1.37
ATG9A-222ENST00000488833 HSP90B1P14625 803 aaKnown RBP23.58■■□□□ 1.37
ATG9A-222ENST00000488833 CCDC27Q2M243 656 aa23.58■■□□□ 1.37
ATG9A-222ENST00000488833 CCDC191Q8NCU4 936 aa23.58■■□□□ 1.37
ATG9A-222ENST00000488833 BCL2L13Q9BXK5 485 aa23.58■■□□□ 1.37
ATG9A-222ENST00000488833 CWC25Q9NXE8 425 aaPredicted RBP23.58■■□□□ 1.37
ATG9A-222ENST00000488833 NSFL1CQ9UNZ2 370 aaKnown RBP23.58■■□□□ 1.37
ATG9A-222ENST00000488833 PCCAP05165 728 aaPredicted RBP23.57■■□□□ 1.36
ATG9A-222ENST00000488833 TNIP1Q15025 636 aa23.57■■□□□ 1.36
ATG9A-222ENST00000488833 WWC1Q8IX03 1113 aa23.57■■□□□ 1.36
ATG9A-222ENST00000488833 METTL22Q9BUU2 404 aaPredicted RBP23.57■■□□□ 1.36
ATG9A-222ENST00000488833 MRS2Q9HD23 443 aa23.57■■□□□ 1.36
ATG9A-222ENST00000488833 CDHR2Q9BYE9 1310 aa23.57■■□□□ 1.36
ATG9A-222ENST00000488833 VEGFBP49765 207 aa23.56■■□□□ 1.36
ATG9A-222ENST00000488833 RPS8P62241 208 aaKnown RBP23.56■■□□□ 1.36
ATG9A-222ENST00000488833 GPSM2P81274 684 aa23.56■■□□□ 1.36
ATG9A-222ENST00000488833 WASHC4Q2M389 1173 aa23.56■■□□□ 1.36
ATG9A-222ENST00000488833 ABT1Q9ULW3 272 aaKnown RBP23.56■■□□□ 1.36
ATG9A-222ENST00000488833 MAP3K2Q9Y2U5 619 aa23.56■■□□□ 1.36
ATG9A-222ENST00000488833 YDJCA8MPS7 323 aa23.55■■□□□ 1.36
ATG9A-222ENST00000488833 C6orf229H3BNL8 230 aa23.55■■□□□ 1.36
ATG9A-222ENST00000488833 JARID2Q92833 1246 aaPredicted RBP23.55■■□□□ 1.36
ATG9A-222ENST00000488833 STK31Q9BXU1 1019 aa23.55■■□□□ 1.36
ATG9A-222ENST00000488833 SEC31BQ9NQW1 1179 aa23.55■■□□□ 1.36
ATG9A-222ENST00000488833 TRPM7Q96QT4 1865 aa23.55■■□□□ 1.36
ATG9A-222ENST00000488833 ANP32CO43423 234 aa23.54■■□□□ 1.36
ATG9A-222ENST00000488833 FMR1Q06787 632 aaKnown RBP eCLIP23.54■■□□□ 1.36
ATG9A-222ENST00000488833 CCDC152Q4G0S7 254 aa23.54■■□□□ 1.36
ATG9A-222ENST00000488833 DBNDD1Q9H9R9 158 aa23.54■■□□□ 1.36
ATG9A-222ENST00000488833 POLLQ9UGP5 575 aa23.54■■□□□ 1.36
ATG9A-222ENST00000488833 RASSF10A6NK89 507 aa23.53■■□□□ 1.36
ATG9A-222ENST00000488833 RIMBP2O15034 1052 aa23.53■■□□□ 1.36
ATG9A-222ENST00000488833 PDE8AO60658 829 aa23.53■■□□□ 1.36
ATG9A-222ENST00000488833 TWISTNBQ3B726 338 aaPredicted RBP23.53■■□□□ 1.36
ATG9A-222ENST00000488833 KSR2Q6VAB6 950 aa23.53■■□□□ 1.36
ATG9A-222ENST00000488833 TNS4Q8IZW8 715 aa23.53■■□□□ 1.36
ATG9A-222ENST00000488833 EYA3Q99504 573 aa23.53■■□□□ 1.36
ATG9A-222ENST00000488833 IL16Q14005 1332 aa23.53■■□□□ 1.36
ATG9A-222ENST00000488833 ZNF316A6NFI3 1004 aaPredicted RBP23.52■■□□□ 1.36
ATG9A-222ENST00000488833 TRAF5O00463 557 aa23.52■■□□□ 1.36
ATG9A-222ENST00000488833 DEFB115Q30KQ5 88 aa23.52■■□□□ 1.36
ATG9A-222ENST00000488833 GPR101Q96P66 508 aaPredicted RBP23.52■■□□□ 1.36
ATG9A-222ENST00000488833 CCDC85AQ96PX6 553 aaPredicted RBP23.52■■□□□ 1.36
ATG9A-222ENST00000488833 PI4KAP2A4QPH2 592 aa23.51■■□□□ 1.35
ATG9A-222ENST00000488833 PI4KAP1Q8N8J0 262 aa23.51■■□□□ 1.35
ATG9A-222ENST00000488833 PSMD14O00487 310 aa23.5■■□□□ 1.35
ATG9A-222ENST00000488833 ECE2O60344 883 aa23.5■■□□□ 1.35
ATG9A-222ENST00000488833 NEXNQ0ZGT2 675 aa23.5■■□□□ 1.35
ATG9A-222ENST00000488833 TBC1D16Q8TBP0 767 aa23.5■■□□□ 1.35
ATG9A-222ENST00000488833 TRPM4Q8TD43 1214 aa23.5■■□□□ 1.35
ATG9A-222ENST00000488833 CNOT7Q9UIV1 285 aaKnown RBP23.5■■□□□ 1.35
ATG9A-222ENST00000488833 MYH3P11055 1940 aa23.49■■□□□ 1.35
ATG9A-222ENST00000488833 SHTN1A0MZ66 631 aa23.49■■□□□ 1.35
ATG9A-222ENST00000488833 UFL1O94874 794 aa23.49■■□□□ 1.35
ATG9A-222ENST00000488833 IGKV5-2P06315 115 aa23.49■■□□□ 1.35
ATG9A-222ENST00000488833 DOK7Q18PE1 504 aa23.49■■□□□ 1.35
ATG9A-222ENST00000488833 MICALL2Q8IY33 904 aa23.49■■□□□ 1.35
ATG9A-222ENST00000488833 AIDAQ96BJ3 306 aa23.49■■□□□ 1.35
ATG9A-222ENST00000488833 ANKIB1Q9P2G1 1089 aa23.49■■□□□ 1.35
ATG9A-222ENST00000488833 ZBTB12Q9Y330 459 aaPredicted RBP23.49■■□□□ 1.35
ATG9A-222ENST00000488833 H7C1D1 291 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms