RNA–Protein interactions for RNA: ENST00000487902.5

PDE6B-210, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-210ENST00000487902 SP8Q8IXZ3 490 aa22.47■■□□□ 1.19
PDE6B-210ENST00000487902 SUPT20HQ8NEM7 779 aa22.47■■□□□ 1.19
PDE6B-210ENST00000487902 ZNF526Q8TF50 670 aaPredicted RBP22.47■■□□□ 1.19
PDE6B-210ENST00000487902 GCKRQ14397 625 aa22.46■■□□□ 1.19
PDE6B-210ENST00000487902 CWF19L2Q2TBE0 894 aaKnown RBP22.46■■□□□ 1.19
PDE6B-210ENST00000487902 VPS33BQ9H267 617 aa22.46■■□□□ 1.19
PDE6B-210ENST00000487902 TIAM2Q8IVF5 1701 aa22.45■■□□□ 1.19
PDE6B-210ENST00000487902 H7C1W4 665 aa22.44■■□□□ 1.18
PDE6B-210ENST00000487902 MYH3P11055 1940 aa22.44■■□□□ 1.18
PDE6B-210ENST00000487902 MRPL50Q8N5N7 158 aaKnown RBP22.44■■□□□ 1.18
PDE6B-210ENST00000487902 ALDH1L1O75891 902 aa22.43■■□□□ 1.18
PDE6B-210ENST00000487902 IARSP41252 1262 aaKnown RBP22.43■■□□□ 1.18
PDE6B-210ENST00000487902 UBE3BQ7Z3V4 1068 aa22.43■■□□□ 1.18
PDE6B-210ENST00000487902 JDP2Q8WYK2 163 aa22.43■■□□□ 1.18
PDE6B-210ENST00000487902 SSH1Q8WYL5 1049 aa22.43■■□□□ 1.18
PDE6B-210ENST00000487902 SMC4Q9NTJ3 1288 aa22.43■■□□□ 1.18
PDE6B-210ENST00000487902 GLTPD2A6NH11 291 aa22.42■■□□□ 1.18
PDE6B-210ENST00000487902 RPS8P62241 208 aaKnown RBP22.42■■□□□ 1.18
PDE6B-210ENST00000487902 BEND3Q5T5X7 828 aa22.42■■□□□ 1.18
PDE6B-210ENST00000487902 DPP8Q6V1X1 898 aaPredicted RBP22.42■■□□□ 1.18
PDE6B-210ENST00000487902 MPNDQ8N594 471 aa22.42■■□□□ 1.18
PDE6B-210ENST00000487902 SRCIN1Q9C0H9 1055 aa22.42■■□□□ 1.18
PDE6B-210ENST00000487902 F6X3S4 739 aa22.41■■□□□ 1.18
PDE6B-210ENST00000487902 PRELPP51888 382 aa22.41■■□□□ 1.18
PDE6B-210ENST00000487902 CTSWP56202 376 aa22.41■■□□□ 1.18
PDE6B-210ENST00000487902 SLC4A10Q6U841 1118 aa22.41■■□□□ 1.18
PDE6B-210ENST00000487902 OLFM4Q6UX06 510 aa22.41■■□□□ 1.18
PDE6B-210ENST00000487902 CDC5LQ99459 802 aaKnown RBP22.41■■□□□ 1.18
PDE6B-210ENST00000487902 PLA2G12BQ9BX93 195 aa22.41■■□□□ 1.18
PDE6B-210ENST00000487902 ZNF277Q9NRM2 450 aaPredicted RBP22.41■■□□□ 1.18
PDE6B-210ENST00000487902 SNED1Q8TER0 1413 aa22.4■■□□□ 1.18
PDE6B-210ENST00000487902 C16orf71Q8IYS4 520 aaPredicted RBP22.39■■□□□ 1.17
PDE6B-210ENST00000487902 C9orf78Q9NZ63 289 aaPredicted RBP22.39■■□□□ 1.17
PDE6B-210ENST00000487902 RTL9Q8NET4 1388 aa22.38■■□□□ 1.17
PDE6B-210ENST00000487902 ZBED9Q6R2W3 1325 aa22.38■■□□□ 1.17
PDE6B-210ENST00000487902 BRPF1P55201 1214 aaPredicted RBP22.38■■□□□ 1.17
PDE6B-210ENST00000487902 ANKRD18AQ8IVF6 992 aa22.38■■□□□ 1.17
PDE6B-210ENST00000487902 LARGE2Q8N3Y3 721 aa22.38■■□□□ 1.17
PDE6B-210ENST00000487902 JARID2Q92833 1246 aaPredicted RBP22.38■■□□□ 1.17
PDE6B-210ENST00000487902 CELF1Q92879 486 aaKnown RBP22.38■■□□□ 1.17
PDE6B-210ENST00000487902 RTFDC1Q9BY42 306 aaPredicted RBP22.38■■□□□ 1.17
PDE6B-210ENST00000487902 LRRC37AA6NMS7 1700 aa22.37■■□□□ 1.17
PDE6B-210ENST00000487902 TAF1P21675 1872 aa22.37■■□□□ 1.17
PDE6B-210ENST00000487902 GRM8O00222 908 aa22.37■■□□□ 1.17
PDE6B-210ENST00000487902 TTLL11Q8NHH1 800 aa22.37■■□□□ 1.17
PDE6B-210ENST00000487902 KIF16BQ96L93 1317 aa22.36■■□□□ 1.17
PDE6B-210ENST00000487902 BCL2L13Q9BXK5 485 aa22.36■■□□□ 1.17
PDE6B-210ENST00000487902 PPIP5K2O43314 1243 aa22.35■■□□□ 1.17
PDE6B-210ENST00000487902 VEGFAP15692 232 aaPredicted RBP22.35■■□□□ 1.17
PDE6B-210ENST00000487902 CASP7P55210 303 aa22.35■■□□□ 1.17
PDE6B-210ENST00000487902 EIF6P56537 245 aaKnown RBP22.35■■□□□ 1.17
PDE6B-210ENST00000487902 NIM1KQ8IY84 436 aa22.35■■□□□ 1.17
PDE6B-210ENST00000487902 API5Q9BZZ5 524 aaKnown RBP22.35■■□□□ 1.17
PDE6B-210ENST00000487902 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
PDE6B-210ENST00000487902 C1QTNF8P60827 252 aa22.34■■□□□ 1.17
PDE6B-210ENST00000487902 EYA3Q99504 573 aa22.34■■□□□ 1.17
PDE6B-210ENST00000487902 NMRK2Q9NPI5 230 aa22.34■■□□□ 1.17
PDE6B-210ENST00000487902 SEC31BQ9NQW1 1179 aa22.34■■□□□ 1.17
PDE6B-210ENST00000487902 FZD9O00144 591 aa22.33■■□□□ 1.17
PDE6B-210ENST00000487902 KIF3CO14782 793 aa22.33■■□□□ 1.17
PDE6B-210ENST00000487902 IPO8O15397 1037 aaKnown RBP22.33■■□□□ 1.17
PDE6B-210ENST00000487902 TOMM70O94826 608 aa22.33■■□□□ 1.17
PDE6B-210ENST00000487902 CSF1RP07333 972 aa22.33■■□□□ 1.17
PDE6B-210ENST00000487902 IGHMBP2P38935 993 aaKnown RBP22.33■■□□□ 1.17
PDE6B-210ENST00000487902 RARSP54136 660 aaKnown RBP22.33■■□□□ 1.17
PDE6B-210ENST00000487902 CCDC85AQ96PX6 553 aaPredicted RBP22.33■■□□□ 1.17
PDE6B-210ENST00000487902 RRAGCQ9HB90 399 aa22.33■■□□□ 1.17
PDE6B-210ENST00000487902 IQCA1LA6NCM1 817 aa22.32■■□□□ 1.16
PDE6B-210ENST00000487902 KIAA2012Q0VF49 1180 aa22.32■■□□□ 1.16
PDE6B-210ENST00000487902 ARHGAP45Q92619 1136 aa22.32■■□□□ 1.16
PDE6B-210ENST00000487902 GREM2Q9H772 168 aa22.32■■□□□ 1.16
PDE6B-210ENST00000487902 BSDC1Q9NW68 430 aaPredicted RBP22.32■■□□□ 1.16
PDE6B-210ENST00000487902 PODXL2Q9NZ53 605 aa22.32■■□□□ 1.16
PDE6B-210ENST00000487902 ANKIB1Q9P2G1 1089 aa22.32■■□□□ 1.16
PDE6B-210ENST00000487902 WDR90Q96KV7 1748 aa22.31■■□□□ 1.16
PDE6B-210ENST00000487902 CCT4P50991 539 aaKnown RBP22.31■■□□□ 1.16
PDE6B-210ENST00000487902 GPC2Q8N158 579 aa22.31■■□□□ 1.16
PDE6B-210ENST00000487902 HDAC5Q9UQL6 1122 aa22.31■■□□□ 1.16
PDE6B-210ENST00000487902 ANKRD18BA2A2Z9 1011 aa22.3■■□□□ 1.16
PDE6B-210ENST00000487902 C6orf229H3BNL8 230 aa22.3■■□□□ 1.16
PDE6B-210ENST00000487902 ITGA6P23229 1130 aa22.3■■□□□ 1.16
PDE6B-210ENST00000487902 IFIT5Q13325 482 aaKnown RBP22.3■■□□□ 1.16
PDE6B-210ENST00000487902 AOC3Q16853 763 aa22.3■■□□□ 1.16
PDE6B-210ENST00000487902 WASHC4Q2M389 1173 aa22.3■■□□□ 1.16
PDE6B-210ENST00000487902 MPHOSPH8Q99549 860 aa22.3■■□□□ 1.16
PDE6B-210ENST00000487902 NOB1Q9ULX3 412 aaKnown RBP22.3■■□□□ 1.16
PDE6B-210ENST00000487902 XDHP47989 1333 aa22.3■■□□□ 1.16
PDE6B-210ENST00000487902 L3MBTL3Q96JM7 780 aaPredicted RBP22.29■■□□□ 1.16
PDE6B-210ENST00000487902 GGA1Q9UJY5 639 aa22.29■■□□□ 1.16
PDE6B-210ENST00000487902 ZNRF3Q9ULT6 936 aa22.29■■□□□ 1.16
PDE6B-210ENST00000487902 UTYO14607 1347 aa22.29■■□□□ 1.16
PDE6B-210ENST00000487902 DDNO94850 711 aaPredicted RBP22.28■■□□□ 1.16
PDE6B-210ENST00000487902 GPSM2P81274 684 aa22.28■■□□□ 1.16
PDE6B-210ENST00000487902 CCDC57Q2TAC2 916 aa22.28■■□□□ 1.16
PDE6B-210ENST00000487902 RBM46Q8TBY0 533 aaKnown RBP22.28■■□□□ 1.16
PDE6B-210ENST00000487902 CHMP3Q9Y3E7 222 aa22.28■■□□□ 1.16
PDE6B-210ENST00000487902 SCN4AP35499 1836 aa22.28■■□□□ 1.16
PDE6B-210ENST00000487902 ATP2B4P23634 1241 aa22.27■■□□□ 1.16
PDE6B-210ENST00000487902 FOXO4P98177 505 aa22.27■■□□□ 1.16
PDE6B-210ENST00000487902 FAM161AQ3B820 660 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms