RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 DUOX1Q9NRD9 1551 aa20.41■□□□□ 0.86
HDAC8-218ENST00000486704 COL4A5P29400 1685 aa20.4■□□□□ 0.86
HDAC8-218ENST00000486704 RTL5Q5HYW3 569 aaPredicted RBP20.4■□□□□ 0.86
HDAC8-218ENST00000486704 ZNF277Q9NRM2 450 aaPredicted RBP20.4■□□□□ 0.86
HDAC8-218ENST00000486704 SPEF2Q9C093 1822 aa20.39■□□□□ 0.86
HDAC8-218ENST00000486704 NEURL1BA8MQ27 555 aa20.39■□□□□ 0.85
HDAC8-218ENST00000486704 IARSP41252 1262 aaKnown RBP20.39■□□□□ 0.85
HDAC8-218ENST00000486704 SLFN5Q08AF3 891 aa20.39■□□□□ 0.85
HDAC8-218ENST00000486704 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
HDAC8-218ENST00000486704 TMX4Q9H1E5 349 aaPredicted RBP20.39■□□□□ 0.85
HDAC8-218ENST00000486704 PDE8AO60658 829 aa20.38■□□□□ 0.85
HDAC8-218ENST00000486704 DPY19L2Q6NUT2 758 aa20.38■□□□□ 0.85
HDAC8-218ENST00000486704 SLC51AQ86UW1 340 aa20.38■□□□□ 0.85
HDAC8-218ENST00000486704 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
HDAC8-218ENST00000486704 TOMM70O94826 608 aa20.37■□□□□ 0.85
HDAC8-218ENST00000486704 CWF19L2Q2TBE0 894 aaKnown RBP20.37■□□□□ 0.85
HDAC8-218ENST00000486704 LINS1Q8NG48 757 aa20.37■□□□□ 0.85
HDAC8-218ENST00000486704 RTFDC1Q9BY42 306 aaPredicted RBP20.36■□□□□ 0.85
HDAC8-218ENST00000486704 VPS33BQ9H267 617 aa20.36■□□□□ 0.85
HDAC8-218ENST00000486704 CCDC152Q4G0S7 254 aa20.35■□□□□ 0.85
HDAC8-218ENST00000486704 TRMT2AQ8IZ69 625 aaKnown RBP20.35■□□□□ 0.85
HDAC8-218ENST00000486704 MIER1Q8N108 512 aa20.35■□□□□ 0.85
HDAC8-218ENST00000486704 RRAGCQ9HB90 399 aa20.35■□□□□ 0.85
HDAC8-218ENST00000486704 RTL9Q8NET4 1388 aa20.34■□□□□ 0.85
HDAC8-218ENST00000486704 FZD9O00144 591 aa20.34■□□□□ 0.85
HDAC8-218ENST00000486704 VEGFAP15692 232 aaPredicted RBP20.34■□□□□ 0.85
HDAC8-218ENST00000486704 GCKRQ14397 625 aa20.34■□□□□ 0.85
HDAC8-218ENST00000486704 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
HDAC8-218ENST00000486704 RBM46Q8TBY0 533 aaKnown RBP20.34■□□□□ 0.85
HDAC8-218ENST00000486704 CELF1Q92879 486 aaKnown RBP20.34■□□□□ 0.85
HDAC8-218ENST00000486704 H7C1W4 665 aa20.33■□□□□ 0.85
HDAC8-218ENST00000486704 CTSWP56202 376 aa20.33■□□□□ 0.85
HDAC8-218ENST00000486704 DPP8Q6V1X1 898 aaPredicted RBP20.33■□□□□ 0.85
HDAC8-218ENST00000486704 C16orf71Q8IYS4 520 aaPredicted RBP20.33■□□□□ 0.85
HDAC8-218ENST00000486704 JDP2Q8WYK2 163 aa20.33■□□□□ 0.85
HDAC8-218ENST00000486704 L3MBTL3Q96JM7 780 aaPredicted RBP20.33■□□□□ 0.85
HDAC8-218ENST00000486704 ZNF541Q9H0D2 1346 aa20.32■□□□□ 0.84
HDAC8-218ENST00000486704 POTECB2RU33 542 aa20.32■□□□□ 0.84
HDAC8-218ENST00000486704 MPNDQ8N594 471 aa20.32■□□□□ 0.84
HDAC8-218ENST00000486704 JARID2Q92833 1246 aaPredicted RBP20.32■□□□□ 0.84
HDAC8-218ENST00000486704 CDCA7LQ96GN5 454 aa20.32■□□□□ 0.84
HDAC8-218ENST00000486704 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
HDAC8-218ENST00000486704 CASP7P55210 303 aa20.31■□□□□ 0.84
HDAC8-218ENST00000486704 RPS8P62241 208 aaKnown RBP20.31■□□□□ 0.84
HDAC8-218ENST00000486704 BEND3Q5T5X7 828 aa20.31■□□□□ 0.84
HDAC8-218ENST00000486704 UBE3BQ7Z3V4 1068 aa20.31■□□□□ 0.84
HDAC8-218ENST00000486704 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
HDAC8-218ENST00000486704 PLA2G12BQ9BX93 195 aa20.31■□□□□ 0.84
HDAC8-218ENST00000486704 F6X3S4 739 aa20.3■□□□□ 0.84
HDAC8-218ENST00000486704 CT47B1P0C2W7 299 aaPredicted RBP20.3■□□□□ 0.84
HDAC8-218ENST00000486704 SEC31BQ9NQW1 1179 aa20.3■□□□□ 0.84
HDAC8-218ENST00000486704 A0A1B0GUL6 1792 aa20.3■□□□□ 0.84
HDAC8-218ENST00000486704 ADAMTSL1Q8N6G6 1762 aa20.3■□□□□ 0.84
HDAC8-218ENST00000486704 PPIP5K2O43314 1243 aa20.29■□□□□ 0.84
HDAC8-218ENST00000486704 KIAA2012Q0VF49 1180 aa20.29■□□□□ 0.84
HDAC8-218ENST00000486704 FSTL1Q12841 308 aa20.29■□□□□ 0.84
HDAC8-218ENST00000486704 AOC3Q16853 763 aa20.29■□□□□ 0.84
HDAC8-218ENST00000486704 ALDH1L2Q3SY69 923 aa20.29■□□□□ 0.84
HDAC8-218ENST00000486704 MRPL50Q8N5N7 158 aaKnown RBP20.29■□□□□ 0.84
HDAC8-218ENST00000486704 TTLL11Q8NHH1 800 aa20.29■□□□□ 0.84
HDAC8-218ENST00000486704 PTPRCP08575 1304 aa20.28■□□□□ 0.84
HDAC8-218ENST00000486704 PSME4Q14997 1843 aa20.28■□□□□ 0.84
HDAC8-218ENST00000486704 IQCA1LA6NCM1 817 aa20.28■□□□□ 0.84
HDAC8-218ENST00000486704 NIM1KQ8IY84 436 aa20.28■□□□□ 0.84
HDAC8-218ENST00000486704 GPC2Q8N158 579 aa20.28■□□□□ 0.84
HDAC8-218ENST00000486704 HSPA6P17066 643 aa20.27■□□□□ 0.84
HDAC8-218ENST00000486704 SSH1Q8WYL5 1049 aa20.27■□□□□ 0.84
HDAC8-218ENST00000486704 CDC5LQ99459 802 aaKnown RBP20.27■□□□□ 0.84
HDAC8-218ENST00000486704 ALDH1L1O75891 902 aa20.26■□□□□ 0.83
HDAC8-218ENST00000486704 EIF6P56537 245 aaKnown RBP20.26■□□□□ 0.83
HDAC8-218ENST00000486704 ANKRD18AQ8IVF6 992 aa20.26■□□□□ 0.83
HDAC8-218ENST00000486704 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
HDAC8-218ENST00000486704 GREM2Q9H772 168 aa20.26■□□□□ 0.83
HDAC8-218ENST00000486704 PODXL2Q9NZ53 605 aa20.26■□□□□ 0.83
HDAC8-218ENST00000486704 GPSM2P81274 684 aa20.25■□□□□ 0.83
HDAC8-218ENST00000486704 CCDC85AQ96PX6 553 aaPredicted RBP20.25■□□□□ 0.83
HDAC8-218ENST00000486704 NSFL1CQ9UNZ2 370 aaKnown RBP20.25■□□□□ 0.83
HDAC8-218ENST00000486704 GRM8O00222 908 aa20.24■□□□□ 0.83
HDAC8-218ENST00000486704 CSF1RP07333 972 aa20.24■□□□□ 0.83
HDAC8-218ENST00000486704 SRCIN1Q9C0H9 1055 aa20.24■□□□□ 0.83
HDAC8-218ENST00000486704 ZNRF3Q9ULT6 936 aa20.24■□□□□ 0.83
HDAC8-218ENST00000486704 POLLQ9UGP5 575 aa20.23■□□□□ 0.83
HDAC8-218ENST00000486704 SCN9AQ15858 1988 aa20.23■□□□□ 0.83
HDAC8-218ENST00000486704 WASHC4Q2M389 1173 aa20.22■□□□□ 0.83
HDAC8-218ENST00000486704 SLC4A10Q6U841 1118 aa20.22■□□□□ 0.83
HDAC8-218ENST00000486704 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
HDAC8-218ENST00000486704 EYA3Q99504 573 aa20.22■□□□□ 0.83
HDAC8-218ENST00000486704 TAF1DQ9H5J8 278 aaPredicted RBP20.22■□□□□ 0.83
HDAC8-218ENST00000486704 BSDC1Q9NW68 430 aaPredicted RBP20.22■□□□□ 0.83
HDAC8-218ENST00000486704 HACL1Q9UJ83 578 aa20.22■□□□□ 0.83
HDAC8-218ENST00000486704 XDHP47989 1333 aa20.22■□□□□ 0.83
HDAC8-218ENST00000486704 CEP350Q5VT06 3117 aa20.21■□□□□ 0.83
HDAC8-218ENST00000486704 BRPF1P55201 1214 aaPredicted RBP20.21■□□□□ 0.83
HDAC8-218ENST00000486704 FAM161AQ3B820 660 aa20.21■□□□□ 0.83
HDAC8-218ENST00000486704 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
HDAC8-218ENST00000486704 SMC4Q9NTJ3 1288 aa20.21■□□□□ 0.83
HDAC8-218ENST00000486704 UTYO14607 1347 aa20.21■□□□□ 0.83
HDAC8-218ENST00000486704 ZNF646O15015 1829 aaPredicted RBP20.2■□□□□ 0.82
HDAC8-218ENST00000486704 C6orf229H3BNL8 230 aa20.2■□□□□ 0.82
HDAC8-218ENST00000486704 ITGA6P23229 1130 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms