RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 MPNDQ8N594 471 aa33.26■■■□□ 2.91
HLA-F-227ENST00000485513 ITGBL1O95965 494 aaPredicted RBP33.25■■■□□ 2.91
HLA-F-227ENST00000485513 TMC4Q7Z404 712 aa33.24■■■□□ 2.91
HLA-F-227ENST00000485513 C8orf58Q8NAV2 365 aa33.24■■■□□ 2.91
HLA-F-227ENST00000485513 PHAXQ9H814 394 aaKnown RBP33.24■■■□□ 2.91
HLA-F-227ENST00000485513 LTBP1Q14766 1721 aa33.23■■■□□ 2.91
HLA-F-227ENST00000485513 SCNN1DP51172 638 aa33.23■■■□□ 2.91
HLA-F-227ENST00000485513 ZEB1P37275 1124 aaPredicted RBP33.22■■■□□ 2.91
HLA-F-227ENST00000485513 SF3B3Q15393 1217 aaKnown RBP33.22■■■□□ 2.91
HLA-F-227ENST00000485513 RTL5Q5HYW3 569 aaPredicted RBP33.22■■■□□ 2.91
HLA-F-227ENST00000485513 MKRN1Q9UHC7 482 aaKnown RBP33.22■■■□□ 2.91
HLA-F-227ENST00000485513 ZNRF3Q9ULT6 936 aa33.22■■■□□ 2.91
HLA-F-227ENST00000485513 MAP1SQ66K74 1059 aaPredicted RBP33.21■■■□□ 2.91
HLA-F-227ENST00000485513 CNTROBQ8N137 903 aa33.21■■■□□ 2.91
HLA-F-227ENST00000485513 CHMP4AQ9BY43 222 aa33.21■■■□□ 2.91
HLA-F-227ENST00000485513 EPS15P42566 896 aa33.2■■■□□ 2.91
HLA-F-227ENST00000485513 TMEM88BA6NKF7 163 aa33.19■■■□□ 2.9
HLA-F-227ENST00000485513 IRS4O14654 1257 aaPredicted RBP33.19■■■□□ 2.9
HLA-F-227ENST00000485513 KIAA2012Q0VF49 1180 aa33.19■■■□□ 2.9
HLA-F-227ENST00000485513 CCDC30Q5VVM6 783 aa33.19■■■□□ 2.9
HLA-F-227ENST00000485513 LRRC37AA6NMS7 1700 aa33.19■■■□□ 2.9
HLA-F-227ENST00000485513 CXCL9Q07325 125 aa33.18■■■□□ 2.9
HLA-F-227ENST00000485513 HSPA1AP0DMV8 641 aaKnown RBP33.17■■■□□ 2.9
HLA-F-227ENST00000485513 HSPA1BP0DMV9 641 aaKnown RBP33.17■■■□□ 2.9
HLA-F-227ENST00000485513 ZBTB38Q8NAP3 1195 aaPredicted RBP33.17■■■□□ 2.9
HLA-F-227ENST00000485513 CELF1Q92879 486 aaKnown RBP33.17■■■□□ 2.9
HLA-F-227ENST00000485513 MYD88Q99836 296 aa33.17■■■□□ 2.9
HLA-F-227ENST00000485513 CNTNAP1P78357 1384 aa33.16■■■□□ 2.9
HLA-F-227ENST00000485513 CCDC27Q2M243 656 aa33.15■■■□□ 2.9
HLA-F-227ENST00000485513 USP50Q70EL3 339 aaPredicted RBP33.15■■■□□ 2.9
HLA-F-227ENST00000485513 TSPYL6Q8N831 410 aa33.15■■■□□ 2.9
HLA-F-227ENST00000485513 DUOX1Q9NRD9 1551 aa33.15■■■□□ 2.9
HLA-F-227ENST00000485513 DDX58O95786 925 aaKnown RBP33.14■■■□□ 2.9
HLA-F-227ENST00000485513 TSR2Q969E8 191 aaKnown RBP33.14■■■□□ 2.9
HLA-F-227ENST00000485513 GPRC5DQ9NZD1 345 aa33.14■■■□□ 2.9
HLA-F-227ENST00000485513 HSP90B1P14625 803 aaKnown RBP33.13■■■□□ 2.89
HLA-F-227ENST00000485513 CIAPIN1Q6FI81 312 aa33.13■■■□□ 2.89
HLA-F-227ENST00000485513 CCDC191Q8NCU4 936 aa33.13■■■□□ 2.89
HLA-F-227ENST00000485513 COL13A1Q5TAT6 717 aaPredicted RBP33.12■■■□□ 2.89
HLA-F-227ENST00000485513 WWC1Q8IX03 1113 aa33.12■■■□□ 2.89
HLA-F-227ENST00000485513 NSFL1CQ9UNZ2 370 aaKnown RBP33.12■■■□□ 2.89
HLA-F-227ENST00000485513 RAD17O75943 681 aa33.11■■■□□ 2.89
HLA-F-227ENST00000485513 TNIP1Q15025 636 aa33.11■■■□□ 2.89
HLA-F-227ENST00000485513 METTL22Q9BUU2 404 aaPredicted RBP33.11■■■□□ 2.89
HLA-F-227ENST00000485513 ADARB2Q9NS39 739 aaKnown RBP33.11■■■□□ 2.89
HLA-F-227ENST00000485513 COL4A1P02462 1669 aa33.1■■■□□ 2.89
HLA-F-227ENST00000485513 GMPSP49915 693 aaPredicted RBP33.1■■■□□ 2.89
HLA-F-227ENST00000485513 MRS2Q9HD23 443 aa33.1■■■□□ 2.89
HLA-F-227ENST00000485513 CWC25Q9NXE8 425 aaPredicted RBP33.1■■■□□ 2.89
HLA-F-227ENST00000485513 PCCAP05165 728 aaPredicted RBP33.09■■■□□ 2.89
HLA-F-227ENST00000485513 RPS8P62241 208 aaKnown RBP33.09■■■□□ 2.89
HLA-F-227ENST00000485513 WASHC4Q2M389 1173 aa33.08■■■□□ 2.89
HLA-F-227ENST00000485513 CDHR2Q9BYE9 1310 aa33.07■■■□□ 2.88
HLA-F-227ENST00000485513 ZNF316A6NFI3 1004 aaPredicted RBP33.07■■■□□ 2.88
HLA-F-227ENST00000485513 YDJCA8MPS7 323 aa33.07■■■□□ 2.88
HLA-F-227ENST00000485513 C6orf229H3BNL8 230 aa33.07■■■□□ 2.88
HLA-F-227ENST00000485513 ANP32CO43423 234 aa33.07■■■□□ 2.88
HLA-F-227ENST00000485513 GPSM2P81274 684 aa33.07■■■□□ 2.88
HLA-F-227ENST00000485513 BCL2L13Q9BXK5 485 aa33.07■■■□□ 2.88
HLA-F-227ENST00000485513 STK31Q9BXU1 1019 aa33.07■■■□□ 2.88
HLA-F-227ENST00000485513 MAP3K2Q9Y2U5 619 aa33.07■■■□□ 2.88
HLA-F-227ENST00000485513 VEGFBP49765 207 aa33.06■■■□□ 2.88
HLA-F-227ENST00000485513 IL16Q14005 1332 aa33.05■■■□□ 2.88
HLA-F-227ENST00000485513 PDE8AO60658 829 aa33.05■■■□□ 2.88
HLA-F-227ENST00000485513 NCBP3Q53F19 620 aaKnown RBP33.05■■■□□ 2.88
HLA-F-227ENST00000485513 KSR2Q6VAB6 950 aa33.05■■■□□ 2.88
HLA-F-227ENST00000485513 JARID2Q92833 1246 aaPredicted RBP33.05■■■□□ 2.88
HLA-F-227ENST00000485513 SEC31BQ9NQW1 1179 aa33.05■■■□□ 2.88
HLA-F-227ENST00000485513 POLLQ9UGP5 575 aa33.05■■■□□ 2.88
HLA-F-227ENST00000485513 TWISTNBQ3B726 338 aaPredicted RBP33.04■■■□□ 2.88
HLA-F-227ENST00000485513 CCDC152Q4G0S7 254 aa33.04■■■□□ 2.88
HLA-F-227ENST00000485513 PI4KAP2A4QPH2 592 aa33.03■■■□□ 2.88
HLA-F-227ENST00000485513 RASSF10A6NK89 507 aa33.03■■■□□ 2.88
HLA-F-227ENST00000485513 RIMBP2O15034 1052 aa33.03■■■□□ 2.88
HLA-F-227ENST00000485513 PI4KAP1Q8N8J0 262 aa33.03■■■□□ 2.88
HLA-F-227ENST00000485513 EYA3Q99504 573 aa33.03■■■□□ 2.88
HLA-F-227ENST00000485513 ABT1Q9ULW3 272 aaKnown RBP33.03■■■□□ 2.88
HLA-F-227ENST00000485513 FMR1Q06787 632 aaKnown RBP eCLIP33.02■■■□□ 2.88
HLA-F-227ENST00000485513 DEFB115Q30KQ5 88 aa33.02■■■□□ 2.88
HLA-F-227ENST00000485513 DBNDD1Q9H9R9 158 aa33.02■■■□□ 2.88
HLA-F-227ENST00000485513 TBC1D16Q8TBP0 767 aa33.01■■■□□ 2.87
HLA-F-227ENST00000485513 TRPM7Q96QT4 1865 aa33.01■■■□□ 2.87
HLA-F-227ENST00000485513 TRAF5O00463 557 aa33■■■□□ 2.87
HLA-F-227ENST00000485513 IGKV5-2P06315 115 aa33■■■□□ 2.87
HLA-F-227ENST00000485513 NEXNQ0ZGT2 675 aa33■■■□□ 2.87
HLA-F-227ENST00000485513 CNOT7Q9UIV1 285 aaKnown RBP33■■■□□ 2.87
HLA-F-227ENST00000485513 CCDC85AQ96PX6 553 aaPredicted RBP32.99■■■□□ 2.87
HLA-F-227ENST00000485513 PODXL2Q9NZ53 605 aa32.99■■■□□ 2.87
HLA-F-227ENST00000485513 GPR101Q96P66 508 aaPredicted RBP32.98■■■□□ 2.87
HLA-F-227ENST00000485513 PSMD14O00487 310 aa32.97■■■□□ 2.87
HLA-F-227ENST00000485513 ECE2O60344 883 aa32.97■■■□□ 2.87
HLA-F-227ENST00000485513 SLC4A2P04920 1241 aa32.97■■■□□ 2.87
HLA-F-227ENST00000485513 DOK7Q18PE1 504 aa32.97■■■□□ 2.87
HLA-F-227ENST00000485513 G2E3Q7L622 706 aa32.97■■■□□ 2.87
HLA-F-227ENST00000485513 TNS4Q8IZW8 715 aa32.97■■■□□ 2.87
HLA-F-227ENST00000485513 ANKIB1Q9P2G1 1089 aa32.97■■■□□ 2.87
HLA-F-227ENST00000485513 ZBTB12Q9Y330 459 aaPredicted RBP32.97■■■□□ 2.87
HLA-F-227ENST00000485513 H7C1D1 291 aa32.96■■■□□ 2.87
HLA-F-227ENST00000485513 MICALL2Q8IY33 904 aa32.96■■■□□ 2.87
HLA-F-227ENST00000485513 TRPM4Q8TD43 1214 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms