RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 RBM47A0AV96 593 aaKnown RBP6.84□□□□□ -1.31
PTCD3-214ENST00000483925 SELPP16109 830 aa6.84□□□□□ -1.31
PTCD3-214ENST00000483925 ERCC3P19447 782 aa6.84□□□□□ -1.31
PTCD3-214ENST00000483925 NRG1Q02297 640 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-214ENST00000483925 CCINQ13939 588 aa6.84□□□□□ -1.31
PTCD3-214ENST00000483925 ADGRE1Q14246 886 aa6.84□□□□□ -1.31
PTCD3-214ENST00000483925 PSAPL1Q6NUJ1 521 aa6.84□□□□□ -1.31
PTCD3-214ENST00000483925 LENG1Q96BZ8 264 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-214ENST00000483925 PPP1R12CQ9BZL4 782 aa6.84□□□□□ -1.31
PTCD3-214ENST00000483925 MAFBQ9Y5Q3 323 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-214ENST00000483925 TGFBR3LH3BV60 316 aa6.83□□□□□ -1.32
PTCD3-214ENST00000483925 RGS9O75916 674 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-214ENST00000483925 AFF1P51825 1210 aaKnown RBP6.83□□□□□ -1.32
PTCD3-214ENST00000483925 MBTPS1Q14703 1052 aa6.83□□□□□ -1.32
PTCD3-214ENST00000483925 PRSS36Q5K4E3 855 aa6.83□□□□□ -1.32
PTCD3-214ENST00000483925 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
PTCD3-214ENST00000483925 GNEQ9Y223 722 aaKnown RBP6.83□□□□□ -1.32
PTCD3-214ENST00000483925 H2AFB1P0C5Y9 115 aa6.82□□□□□ -1.32
PTCD3-214ENST00000483925 H2AFB2P0C5Z0 115 aa6.82□□□□□ -1.32
PTCD3-214ENST00000483925 EPB42P16452 691 aa6.82□□□□□ -1.32
PTCD3-214ENST00000483925 NFKB1P19838 968 aa6.82□□□□□ -1.32
PTCD3-214ENST00000483925 PCSK7Q16549 785 aa6.82□□□□□ -1.32
PTCD3-214ENST00000483925 FOXD4L6Q3SYB3 417 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-214ENST00000483925 FOXD4L3Q6VB84 417 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-214ENST00000483925 TXNRD3Q86VQ6 643 aa6.82□□□□□ -1.32
PTCD3-214ENST00000483925 DMGDHQ9UI17 866 aaKnown RBP6.82□□□□□ -1.32
PTCD3-214ENST00000483925 ATG7O95352 703 aa6.81□□□□□ -1.32
PTCD3-214ENST00000483925 IGFBP4P22692 258 aa6.81□□□□□ -1.32
PTCD3-214ENST00000483925 DPYDQ12882 1025 aa6.81□□□□□ -1.32
PTCD3-214ENST00000483925 PTK7Q13308 1070 aa6.81□□□□□ -1.32
PTCD3-214ENST00000483925 CRTC2Q53ET0 693 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-214ENST00000483925 SHISA2Q6UWI4 295 aa6.81□□□□□ -1.32
PTCD3-214ENST00000483925 DMRTC2Q8IXT2 367 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-214ENST00000483925 FMR1NBQ8N0W7 255 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-214ENST00000483925 PSMG3-AS1Q96PY0 264 aa6.81□□□□□ -1.32
PTCD3-214ENST00000483925 NAGPAQ9UK23 515 aa6.81□□□□□ -1.32
PTCD3-214ENST00000483925 BCS1LQ9Y276 419 aa6.81□□□□□ -1.32
PTCD3-214ENST00000483925 UNCXA6NJT0 531 aa6.8□□□□□ -1.32
PTCD3-214ENST00000483925 LMOD1P29536 600 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-214ENST00000483925 ARTNQ5T4W7 220 aa6.8□□□□□ -1.32
PTCD3-214ENST00000483925 ILDR2Q71H61 639 aa6.8□□□□□ -1.32
PTCD3-214ENST00000483925 FAM35AQ86V20 835 aa6.8□□□□□ -1.32
PTCD3-214ENST00000483925 IGSF5Q9NSI5 407 aa6.8□□□□□ -1.32
PTCD3-214ENST00000483925 USP21Q9UK80 565 aa6.8□□□□□ -1.32
PTCD3-214ENST00000483925 LGR5O75473 907 aa6.79□□□□□ -1.32
PTCD3-214ENST00000483925 MAP3K6O95382 1288 aa6.79□□□□□ -1.32
PTCD3-214ENST00000483925 INPP5BP32019 993 aa6.79□□□□□ -1.32
PTCD3-214ENST00000483925 IDH3AP50213 366 aa6.79□□□□□ -1.32
PTCD3-214ENST00000483925 KANK4Q5T7N3 995 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-214ENST00000483925 MSL1Q68DK7 614 aa6.79□□□□□ -1.32
PTCD3-214ENST00000483925 ANKMY2Q8IV38 441 aa6.79□□□□□ -1.32
PTCD3-214ENST00000483925 CCER1Q8TC90 406 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-214ENST00000483925 ZFP64Q9NPA5 681 aa6.79□□□□□ -1.32
PTCD3-214ENST00000483925 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
PTCD3-214ENST00000483925 CARNS1A5YM72 827 aa6.78□□□□□ -1.32
PTCD3-214ENST00000483925 TMEM88BA6NKF7 163 aa6.78□□□□□ -1.32
PTCD3-214ENST00000483925 FAM196BA6NMK8 535 aa6.78□□□□□ -1.32
PTCD3-214ENST00000483925 CPB1P15086 417 aa6.78□□□□□ -1.32
PTCD3-214ENST00000483925 CANXP27824 592 aaKnown RBP6.78□□□□□ -1.32
PTCD3-214ENST00000483925 DTWD1Q8N5C7 304 aa6.78□□□□□ -1.32
PTCD3-214ENST00000483925 KLK14Q9P0G3 267 aa6.78□□□□□ -1.32
PTCD3-214ENST00000483925 FRRS1LQ9P0K9 344 aa6.78□□□□□ -1.32
PTCD3-214ENST00000483925 USP17L15C9J2P7 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L10C9JJH3 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L13C9JLJ4 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L12C9JPN9 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L11C9JVI0 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L21D6R901 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L18D6R9N7 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L22D6RA61 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L17D6RBQ6 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L19D6RCP7 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L20D6RJB6 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 GRNP28799 593 aaKnown RBP6.77□□□□□ -1.33
PTCD3-214ENST00000483925 ARSDP51689 593 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 USP17L24Q0WX57 530 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 DGKZQ13574 1117 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 FAM177A1Q8N128 213 aaPredicted RBP6.77□□□□□ -1.33
PTCD3-214ENST00000483925 TRPM4Q8TD43 1214 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 TP53INP1Q96A56 240 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 ZFATQ9P243 1243 aa6.77□□□□□ -1.33
PTCD3-214ENST00000483925 TARSP26639 723 aaKnown RBP6.76□□□□□ -1.33
PTCD3-214ENST00000483925 PERM1Q5SV97 790 aa6.76□□□□□ -1.33
PTCD3-214ENST00000483925 ELMSAN1Q6PJG2 1045 aa6.76□□□□□ -1.33
PTCD3-214ENST00000483925 DHX32Q7L7V1 743 aaKnown RBP6.76□□□□□ -1.33
PTCD3-214ENST00000483925 KRT25Q7Z3Z0 450 aa6.76□□□□□ -1.33
PTCD3-214ENST00000483925 FBXO11Q86XK2 927 aa6.76□□□□□ -1.33
PTCD3-214ENST00000483925 VTI1AQ96AJ9 217 aa6.76□□□□□ -1.33
PTCD3-214ENST00000483925 LPIN3Q9BQK8 851 aa6.76□□□□□ -1.33
PTCD3-214ENST00000483925 ZBTB42B2RXF5 422 aa6.75□□□□□ -1.33
PTCD3-214ENST00000483925 FOXO3O43524 673 aa6.75□□□□□ -1.33
PTCD3-214ENST00000483925 SASH3O75995 380 aa6.75□□□□□ -1.33
PTCD3-214ENST00000483925 MICAL2O94851 1124 aa6.75□□□□□ -1.33
PTCD3-214ENST00000483925 ARID4AP29374 1257 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-214ENST00000483925 WEE1P30291 646 aa6.75□□□□□ -1.33
PTCD3-214ENST00000483925 GRIK5Q16478 980 aa6.75□□□□□ -1.33
PTCD3-214ENST00000483925 C11orf91Q3C1V1 193 aa6.75□□□□□ -1.33
PTCD3-214ENST00000483925 NBPF11Q86T75 865 aa6.75□□□□□ -1.33
PTCD3-214ENST00000483925 WFDC8Q8IUA0 241 aa6.75□□□□□ -1.33
PTCD3-214ENST00000483925 TTC9Q92623 222 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms