RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, human

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD4-208	ENST00000483670		H7C1W4	665 aa		32.78	■■■□□ 2.84
PDCD4-208	ENST00000483670	BRPF1	P55201	1214 aa	Predicted RBP	32.78	■■■□□ 2.84
PDCD4-208	ENST00000483670	CCDC152	Q4G0S7	254 aa		32.78	■■■□□ 2.84
PDCD4-208	ENST00000483670	MYH3	P11055	1940 aa		32.77	■■■□□ 2.84
PDCD4-208	ENST00000483670	ATP6V0A2	Q9Y487	856 aa		32.77	■■■□□ 2.84
PDCD4-208	ENST00000483670	ALDH1L1	O75891	902 aa		32.76	■■■□□ 2.83
PDCD4-208	ENST00000483670	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.76	■■■□□ 2.83
PDCD4-208	ENST00000483670	DICER1	Q9UPY3	1922 aa	Known RBP	32.75	■■■□□ 2.83
PDCD4-208	ENST00000483670	UBE3B	Q7Z3V4	1068 aa		32.75	■■■□□ 2.83
PDCD4-208	ENST00000483670	PSMD1	Q99460	953 aa		32.75	■■■□□ 2.83
PDCD4-208	ENST00000483670	BCL2L13	Q9BXK5	485 aa		32.75	■■■□□ 2.83
PDCD4-208	ENST00000483670	SLC4A10	Q6U841	1118 aa		32.74	■■■□□ 2.83
PDCD4-208	ENST00000483670	SP8	Q8IXZ3	490 aa		32.74	■■■□□ 2.83
PDCD4-208	ENST00000483670	SRCIN1	Q9C0H9	1055 aa		32.74	■■■□□ 2.83
PDCD4-208	ENST00000483670	PLA2G12B	Q9BX93	195 aa		32.73	■■■□□ 2.83
PDCD4-208	ENST00000483670	SNED1	Q8TER0	1413 aa		32.72	■■■□□ 2.83
PDCD4-208	ENST00000483670	RARS	P54136	660 aa	Known RBP	32.72	■■■□□ 2.83
PDCD4-208	ENST00000483670	CTSW	P56202	376 aa		32.72	■■■□□ 2.83
PDCD4-208	ENST00000483670	JARID2	Q92833	1246 aa	Predicted RBP	32.72	■■■□□ 2.83
PDCD4-208	ENST00000483670	KIF16B	Q96L93	1317 aa		32.71	■■■□□ 2.83
PDCD4-208	ENST00000483670	OLFM4	Q6UX06	510 aa		32.7	■■■□□ 2.83
PDCD4-208	ENST00000483670	TIAM2	Q8IVF5	1701 aa		32.7	■■■□□ 2.83
PDCD4-208	ENST00000483670	PRELP	P51888	382 aa		32.69	■■■□□ 2.82
PDCD4-208	ENST00000483670	CASP7	P55210	303 aa		32.69	■■■□□ 2.82
PDCD4-208	ENST00000483670	TAF1	P21675	1872 aa		32.69	■■■□□ 2.82
PDCD4-208	ENST00000483670	RTL9	Q8NET4	1388 aa		32.69	■■■□□ 2.82
PDCD4-208	ENST00000483670	GRM8	O00222	908 aa		32.68	■■■□□ 2.82
PDCD4-208	ENST00000483670	RPS8	P62241	208 aa	Known RBP	32.68	■■■□□ 2.82
PDCD4-208	ENST00000483670	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.68	■■■□□ 2.82
PDCD4-208	ENST00000483670	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.68	■■■□□ 2.82
PDCD4-208	ENST00000483670	TTLL11	Q8NHH1	800 aa		32.67	■■■□□ 2.82
PDCD4-208	ENST00000483670	CELF1	Q92879	486 aa	Known RBP	32.67	■■■□□ 2.82
PDCD4-208	ENST00000483670	API5	Q9BZZ5	524 aa	Known RBP	32.67	■■■□□ 2.82
PDCD4-208	ENST00000483670	LRRC37A	A6NMS7	1700 aa		32.67	■■■□□ 2.82
PDCD4-208	ENST00000483670	SUPT20H	Q8NEM7	779 aa		32.66	■■■□□ 2.82
PDCD4-208	ENST00000483670	CDC5L	Q99459	802 aa	Known RBP	32.66	■■■□□ 2.82
PDCD4-208	ENST00000483670	VPS33B	Q9H267	617 aa		32.66	■■■□□ 2.82
PDCD4-208	ENST00000483670	ARHGAP45	Q92619	1136 aa		32.65	■■■□□ 2.82
PDCD4-208	ENST00000483670	NOB1	Q9ULX3	412 aa	Known RBP	32.65	■■■□□ 2.82
PDCD4-208	ENST00000483670	KDM2B	Q8NHM5	1336 aa		32.65	■■■□□ 2.82
PDCD4-208	ENST00000483670	IARS	P41252	1262 aa	Known RBP	32.64	■■■□□ 2.82
PDCD4-208	ENST00000483670	MPND	Q8N594	471 aa		32.64	■■■□□ 2.82
PDCD4-208	ENST00000483670	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.64	■■■□□ 2.82
PDCD4-208	ENST00000483670	DPP8	Q6V1X1	898 aa	Predicted RBP	32.63	■■■□□ 2.81
PDCD4-208	ENST00000483670	SEC31B	Q9NQW1	1179 aa		32.63	■■■□□ 2.81
PDCD4-208	ENST00000483670	IPO8	O15397	1037 aa	Known RBP	32.62	■■■□□ 2.81
PDCD4-208	ENST00000483670	ANKRD18A	Q8IVF6	992 aa		32.62	■■■□□ 2.81
PDCD4-208	ENST00000483670	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.62	■■■□□ 2.81
PDCD4-208	ENST00000483670	CSF1R	P07333	972 aa		32.61	■■■□□ 2.81
PDCD4-208	ENST00000483670	CCT4	P50991	539 aa	Known RBP	32.61	■■■□□ 2.81
PDCD4-208	ENST00000483670	DPY19L2	Q6NUT2	758 aa		32.61	■■■□□ 2.81
PDCD4-208	ENST00000483670	ZNF526	Q8TF50	670 aa	Predicted RBP	32.61	■■■□□ 2.81
PDCD4-208	ENST00000483670	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.61	■■■□□ 2.81
PDCD4-208	ENST00000483670	UTY	O14607	1347 aa		32.6	■■■□□ 2.81
PDCD4-208	ENST00000483670	JDP2	Q8WYK2	163 aa		32.6	■■■□□ 2.81
PDCD4-208	ENST00000483670	GREM2	Q9H772	168 aa		32.6	■■■□□ 2.81
PDCD4-208	ENST00000483670	GLTPD2	A6NH11	291 aa		32.58	■■■□□ 2.81
PDCD4-208	ENST00000483670	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.56	■■■□□ 2.8
PDCD4-208	ENST00000483670	ITGA6	P23229	1130 aa		32.55	■■■□□ 2.8
PDCD4-208	ENST00000483670	IGHMBP2	P38935	993 aa	Known RBP	32.55	■■■□□ 2.8
PDCD4-208	ENST00000483670	FOXO4	P98177	505 aa		32.55	■■■□□ 2.8
PDCD4-208	ENST00000483670	LARGE2	Q8N3Y3	721 aa		32.55	■■■□□ 2.8
PDCD4-208	ENST00000483670	BSDC1	Q9NW68	430 aa	Predicted RBP	32.55	■■■□□ 2.8
PDCD4-208	ENST00000483670	COL4A1	P02462	1669 aa		32.55	■■■□□ 2.8
PDCD4-208	ENST00000483670	PODXL2	Q9NZ53	605 aa		32.54	■■■□□ 2.8
PDCD4-208	ENST00000483670	ANKRD18B	A2A2Z9	1011 aa		32.53	■■■□□ 2.8
PDCD4-208	ENST00000483670	PPIP5K2	O43314	1243 aa		32.53	■■■□□ 2.8
PDCD4-208	ENST00000483670	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.53	■■■□□ 2.8
PDCD4-208	ENST00000483670	FAM161A	Q3B820	660 aa		32.53	■■■□□ 2.8
PDCD4-208	ENST00000483670	SLC51A	Q86UW1	340 aa		32.53	■■■□□ 2.8
PDCD4-208	ENST00000483670	BCAR3	O75815	825 aa		32.52	■■■□□ 2.8
PDCD4-208	ENST00000483670	IFIT5	Q13325	482 aa	Known RBP	32.52	■■■□□ 2.8
PDCD4-208	ENST00000483670	HDAC5	Q9UQL6	1122 aa		32.52	■■■□□ 2.8
PDCD4-208	ENST00000483670	LTBP1	Q14766	1721 aa		32.51	■■■□□ 2.8
PDCD4-208	ENST00000483670	FZD9	O00144	591 aa		32.51	■■■□□ 2.79
PDCD4-208	ENST00000483670	KIAA2012	Q0VF49	1180 aa		32.51	■■■□□ 2.79
PDCD4-208	ENST00000483670	LMBR1L	Q6UX01	489 aa		32.51	■■■□□ 2.79
PDCD4-208	ENST00000483670	ATF7IP	Q6VMQ6	1270 aa		32.51	■■■□□ 2.79
PDCD4-208	ENST00000483670	NIM1K	Q8IY84	436 aa		32.51	■■■□□ 2.79
PDCD4-208	ENST00000483670	EYA3	Q99504	573 aa		32.51	■■■□□ 2.79
PDCD4-208	ENST00000483670	USP44	Q9H0E7	712 aa		32.51	■■■□□ 2.79
PDCD4-208	ENST00000483670	ANKIB1	Q9P2G1	1089 aa		32.51	■■■□□ 2.79
PDCD4-208	ENST00000483670	DUOX1	Q9NRD9	1551 aa		32.5	■■■□□ 2.79
PDCD4-208	ENST00000483670	GPSM2	P81274	684 aa		32.5	■■■□□ 2.79
PDCD4-208	ENST00000483670	MPHOSPH8	Q99549	860 aa		32.5	■■■□□ 2.79
PDCD4-208	ENST00000483670	CHMP3	Q9Y3E7	222 aa		32.5	■■■□□ 2.79
PDCD4-208	ENST00000483670	XDH	P47989	1333 aa		32.5	■■■□□ 2.79
PDCD4-208	ENST00000483670	SPEF2	Q9C093	1822 aa		32.49	■■■□□ 2.79
PDCD4-208	ENST00000483670	AOC3	Q16853	763 aa		32.49	■■■□□ 2.79
PDCD4-208	ENST00000483670	CCDC57	Q2TAC2	916 aa		32.49	■■■□□ 2.79
PDCD4-208	ENST00000483670	FRAT1	Q92837	279 aa	Predicted RBP	32.49	■■■□□ 2.79
PDCD4-208	ENST00000483670	EIF6	P56537	245 aa	Known RBP	32.48	■■■□□ 2.79
PDCD4-208	ENST00000483670	ZKSCAN2	Q63HK3	967 aa		32.48	■■■□□ 2.79
PDCD4-208	ENST00000483670	SUCLG2	Q96I99	432 aa		32.48	■■■□□ 2.79
PDCD4-208	ENST00000483670	WDR90	Q96KV7	1748 aa		32.48	■■■□□ 2.79
PDCD4-208	ENST00000483670	C6orf229	H3BNL8	230 aa		32.47	■■■□□ 2.79
PDCD4-208	ENST00000483670	TRIM27	P14373	513 aa		32.47	■■■□□ 2.79
PDCD4-208	ENST00000483670	WASHC4	Q2M389	1173 aa		32.47	■■■□□ 2.79
PDCD4-208	ENST00000483670	EPHA10	Q5JZY3	1008 aa		32.47	■■■□□ 2.79
PDCD4-208	ENST00000483670	INTS3	Q68E01	1043 aa	Known RBP	32.47	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms