RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 H7C1W4 665 aa23.34■■□□□ 1.33
SMIM4-204ENST00000482728 PRELPP51888 382 aa23.34■■□□□ 1.33
SMIM4-204ENST00000482728 CCDC152Q4G0S7 254 aa23.34■■□□□ 1.33
SMIM4-204ENST00000482728 FER1L6Q2WGJ9 1857 aa23.33■■□□□ 1.33
SMIM4-204ENST00000482728 BEND3Q5T5X7 828 aa23.33■■□□□ 1.33
SMIM4-204ENST00000482728 TMC4Q7Z404 712 aa23.33■■□□□ 1.33
SMIM4-204ENST00000482728 SP8Q8IXZ3 490 aa23.33■■□□□ 1.33
SMIM4-204ENST00000482728 PTPRCP08575 1304 aa23.33■■□□□ 1.32
SMIM4-204ENST00000482728 CCDC88AQ3V6T2 1871 aa23.32■■□□□ 1.32
SMIM4-204ENST00000482728 LAMB2P55268 1798 aa23.32■■□□□ 1.32
SMIM4-204ENST00000482728 ZC3H4Q9UPT8 1303 aaKnown RBP23.32■■□□□ 1.32
SMIM4-204ENST00000482728 DDX60Q8IY21 1712 aaKnown RBP23.31■■□□□ 1.32
SMIM4-204ENST00000482728 PSMD1Q99460 953 aa23.31■■□□□ 1.32
SMIM4-204ENST00000482728 SRCIN1Q9C0H9 1055 aa23.31■■□□□ 1.32
SMIM4-204ENST00000482728 ZNF277Q9NRM2 450 aaPredicted RBP23.31■■□□□ 1.32
SMIM4-204ENST00000482728 RPS8P62241 208 aaKnown RBP23.3■■□□□ 1.32
SMIM4-204ENST00000482728 CELF1Q92879 486 aaKnown RBP23.3■■□□□ 1.32
SMIM4-204ENST00000482728 CCDC85AQ96PX6 553 aaPredicted RBP23.3■■□□□ 1.32
SMIM4-204ENST00000482728 C9orf78Q9NZ63 289 aaPredicted RBP23.3■■□□□ 1.32
SMIM4-204ENST00000482728 KDM2BQ8NHM5 1336 aa23.3■■□□□ 1.32
SMIM4-204ENST00000482728 ALDH1L1O75891 902 aa23.29■■□□□ 1.32
SMIM4-204ENST00000482728 CTSWP56202 376 aa23.29■■□□□ 1.32
SMIM4-204ENST00000482728 ZBED9Q6R2W3 1325 aa23.29■■□□□ 1.32
SMIM4-204ENST00000482728 DPY19L2Q6NUT2 758 aa23.28■■□□□ 1.32
SMIM4-204ENST00000482728 MPNDQ8N594 471 aa23.28■■□□□ 1.32
SMIM4-204ENST00000482728 SEC31BQ9NQW1 1179 aa23.28■■□□□ 1.32
SMIM4-204ENST00000482728 IARSP41252 1262 aaKnown RBP23.27■■□□□ 1.32
SMIM4-204ENST00000482728 RARSP54136 660 aaKnown RBP23.27■■□□□ 1.32
SMIM4-204ENST00000482728 DPP8Q6V1X1 898 aaPredicted RBP23.27■■□□□ 1.32
SMIM4-204ENST00000482728 TTLL11Q8NHH1 800 aa23.27■■□□□ 1.32
SMIM4-204ENST00000482728 GRM8O00222 908 aa23.26■■□□□ 1.31
SMIM4-204ENST00000482728 SUPT20HQ8NEM7 779 aa23.26■■□□□ 1.31
SMIM4-204ENST00000482728 JDP2Q8WYK2 163 aa23.26■■□□□ 1.31
SMIM4-204ENST00000482728 PLA2G12BQ9BX93 195 aa23.26■■□□□ 1.31
SMIM4-204ENST00000482728 TAF1P21675 1872 aa23.26■■□□□ 1.31
SMIM4-204ENST00000482728 CASP7P55210 303 aa23.25■■□□□ 1.31
SMIM4-204ENST00000482728 SLC51AQ86UW1 340 aa23.25■■□□□ 1.31
SMIM4-204ENST00000482728 ANKRD18AQ8IVF6 992 aa23.25■■□□□ 1.31
SMIM4-204ENST00000482728 CDC5LQ99459 802 aaKnown RBP23.25■■□□□ 1.31
SMIM4-204ENST00000482728 NOB1Q9ULX3 412 aaKnown RBP23.25■■□□□ 1.31
SMIM4-204ENST00000482728 GLTPD2A6NH11 291 aa23.24■■□□□ 1.31
SMIM4-204ENST00000482728 BRPF1P55201 1214 aaPredicted RBP23.24■■□□□ 1.31
SMIM4-204ENST00000482728 LARGE2Q8N3Y3 721 aa23.24■■□□□ 1.31
SMIM4-204ENST00000482728 NSFL1CQ9UNZ2 370 aaKnown RBP23.24■■□□□ 1.31
SMIM4-204ENST00000482728 GREM2Q9H772 168 aa23.23■■□□□ 1.31
SMIM4-204ENST00000482728 DICER1Q9UPY3 1922 aaKnown RBP23.22■■□□□ 1.31
SMIM4-204ENST00000482728 RTFDC1Q9BY42 306 aaPredicted RBP23.22■■□□□ 1.31
SMIM4-204ENST00000482728 API5Q9BZZ5 524 aaKnown RBP23.22■■□□□ 1.31
SMIM4-204ENST00000482728 VPS33BQ9H267 617 aa23.22■■□□□ 1.31
SMIM4-204ENST00000482728 NMRK2Q9NPI5 230 aa23.22■■□□□ 1.31
SMIM4-204ENST00000482728 SNED1Q8TER0 1413 aa23.22■■□□□ 1.31
SMIM4-204ENST00000482728 PPIP5K2O43314 1243 aa23.21■■□□□ 1.31
SMIM4-204ENST00000482728 RRAGCQ9HB90 399 aa23.21■■□□□ 1.31
SMIM4-204ENST00000482728 RTL9Q8NET4 1388 aa23.2■■□□□ 1.3
SMIM4-204ENST00000482728 KIF16BQ96L93 1317 aa23.2■■□□□ 1.3
SMIM4-204ENST00000482728 IPO8O15397 1037 aaKnown RBP23.2■■□□□ 1.3
SMIM4-204ENST00000482728 CSF1RP07333 972 aa23.2■■□□□ 1.3
SMIM4-204ENST00000482728 ANKIB1Q9P2G1 1089 aa23.2■■□□□ 1.3
SMIM4-204ENST00000482728 CHMP3Q9Y3E7 222 aa23.2■■□□□ 1.3
SMIM4-204ENST00000482728 C6orf229H3BNL8 230 aa23.19■■□□□ 1.3
SMIM4-204ENST00000482728 GPSM2P81274 684 aa23.19■■□□□ 1.3
SMIM4-204ENST00000482728 NIM1KQ8IY84 436 aa23.19■■□□□ 1.3
SMIM4-204ENST00000482728 MYH3P11055 1940 aa23.19■■□□□ 1.3
SMIM4-204ENST00000482728 ITGA6P23229 1130 aa23.18■■□□□ 1.3
SMIM4-204ENST00000482728 IGHMBP2P38935 993 aaKnown RBP23.18■■□□□ 1.3
SMIM4-204ENST00000482728 CCT4P50991 539 aaKnown RBP23.18■■□□□ 1.3
SMIM4-204ENST00000482728 EIF6P56537 245 aaKnown RBP23.18■■□□□ 1.3
SMIM4-204ENST00000482728 FOXO4P98177 505 aa23.18■■□□□ 1.3
SMIM4-204ENST00000482728 AOC3Q16853 763 aa23.18■■□□□ 1.3
SMIM4-204ENST00000482728 FAM161AQ3B820 660 aa23.18■■□□□ 1.3
SMIM4-204ENST00000482728 C16orf71Q8IYS4 520 aaPredicted RBP23.18■■□□□ 1.3
SMIM4-204ENST00000482728 ARHGAP45Q92619 1136 aa23.18■■□□□ 1.3
SMIM4-204ENST00000482728 ANKRD18BA2A2Z9 1011 aa23.17■■□□□ 1.3
SMIM4-204ENST00000482728 KIF3CO14782 793 aa23.17■■□□□ 1.3
SMIM4-204ENST00000482728 NBPF7P0C2Y1 421 aaPredicted RBP23.17■■□□□ 1.3
SMIM4-204ENST00000482728 VEGFAP15692 232 aaPredicted RBP23.17■■□□□ 1.3
SMIM4-204ENST00000482728 IFIT5Q13325 482 aaKnown RBP23.17■■□□□ 1.3
SMIM4-204ENST00000482728 LMBR1LQ6UX01 489 aa23.17■■□□□ 1.3
SMIM4-204ENST00000482728 MPHOSPH8Q99549 860 aa23.17■■□□□ 1.3
SMIM4-204ENST00000482728 BSDC1Q9NW68 430 aaPredicted RBP23.17■■□□□ 1.3
SMIM4-204ENST00000482728 TIAM2Q8IVF5 1701 aa23.16■■□□□ 1.3
SMIM4-204ENST00000482728 FZD9O00144 591 aa23.16■■□□□ 1.3
SMIM4-204ENST00000482728 BCAR3O75815 825 aa23.16■■□□□ 1.3
SMIM4-204ENST00000482728 DDNO94850 711 aaPredicted RBP23.16■■□□□ 1.3
SMIM4-204ENST00000482728 WASHC4Q2M389 1173 aa23.16■■□□□ 1.3
SMIM4-204ENST00000482728 FRAT1Q92837 279 aaPredicted RBP23.16■■□□□ 1.3
SMIM4-204ENST00000482728 UTYO14607 1347 aa23.15■■□□□ 1.3
SMIM4-204ENST00000482728 KIAA2012Q0VF49 1180 aa23.15■■□□□ 1.3
SMIM4-204ENST00000482728 EPHA10Q5JZY3 1008 aa23.15■■□□□ 1.3
SMIM4-204ENST00000482728 EYA3Q99504 573 aa23.15■■□□□ 1.3
SMIM4-204ENST00000482728 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
SMIM4-204ENST00000482728 PODXL2Q9NZ53 605 aa23.15■■□□□ 1.3
SMIM4-204ENST00000482728 GGA1Q9UJY5 639 aa23.15■■□□□ 1.3
SMIM4-204ENST00000482728 C1QTNF8P60827 252 aa23.14■■□□□ 1.29
SMIM4-204ENST00000482728 CCDC57Q2TAC2 916 aa23.14■■□□□ 1.29
SMIM4-204ENST00000482728 TBC1D16Q8TBP0 767 aa23.14■■□□□ 1.29
SMIM4-204ENST00000482728 SUCLG2Q96I99 432 aa23.14■■□□□ 1.29
SMIM4-204ENST00000482728 POLLQ9UGP5 575 aa23.14■■□□□ 1.29
SMIM4-204ENST00000482728 ZNRF3Q9ULT6 936 aa23.14■■□□□ 1.29
SMIM4-204ENST00000482728 XDHP47989 1333 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms