RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 GRAPQ13588 217 aa17.38■□□□□ 0.37
CTDSP1-208ENST00000482272 DPP8Q6V1X1 898 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-208ENST00000482272 TMC4Q7Z404 712 aa17.38■□□□□ 0.37
CTDSP1-208ENST00000482272 MPNDQ8N594 471 aa17.38■□□□□ 0.37
CTDSP1-208ENST00000482272 GRAPLQ8TC17 118 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-208ENST00000482272 TSR2Q969E8 191 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-208ENST00000482272 CREBZFQ9NS37 354 aa17.38■□□□□ 0.37
CTDSP1-208ENST00000482272 TRIM28Q13263 835 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-208ENST00000482272 FAM89AQ96GI7 184 aa17.37■□□□□ 0.37
CTDSP1-208ENST00000482272 RTFDC1Q9BY42 306 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-208ENST00000482272 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-208ENST00000482272 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-208ENST00000482272 AOC3Q16853 763 aa17.36■□□□□ 0.37
CTDSP1-208ENST00000482272 CCDC30Q5VVM6 783 aa17.36■□□□□ 0.37
CTDSP1-208ENST00000482272 ZNRF3Q9ULT6 936 aa17.35■□□□□ 0.37
CTDSP1-208ENST00000482272 PASKQ96RG2 1323 aa17.35■□□□□ 0.37
CTDSP1-208ENST00000482272 IRS4O14654 1257 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-208ENST00000482272 ANP32CO43423 234 aa17.34■□□□□ 0.37
CTDSP1-208ENST00000482272 DDX58O95786 925 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-208ENST00000482272 ITGBL1O95965 494 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-208ENST00000482272 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
CTDSP1-208ENST00000482272 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-208ENST00000482272 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
CTDSP1-208ENST00000482272 CNTROBQ8N137 903 aa17.34■□□□□ 0.37
CTDSP1-208ENST00000482272 ZBTB38Q8NAP3 1195 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-208ENST00000482272 MYD88Q99836 296 aa17.33■□□□□ 0.36
CTDSP1-208ENST00000482272 MRS2Q9HD23 443 aa17.33■□□□□ 0.36
CTDSP1-208ENST00000482272 TMEM88BA6NKF7 163 aa17.32■□□□□ 0.36
CTDSP1-208ENST00000482272 SCNN1DP51172 638 aa17.32■□□□□ 0.36
CTDSP1-208ENST00000482272 KIAA2012Q0VF49 1180 aa17.32■□□□□ 0.36
CTDSP1-208ENST00000482272 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-208ENST00000482272 USP50Q70EL3 339 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-208ENST00000482272 CCDC191Q8NCU4 936 aa17.32■□□□□ 0.36
CTDSP1-208ENST00000482272 EPS15P42566 896 aa17.31■□□□□ 0.36
CTDSP1-208ENST00000482272 CXCL9Q07325 125 aa17.31■□□□□ 0.36
CTDSP1-208ENST00000482272 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-208ENST00000482272 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
CTDSP1-208ENST00000482272 CELF1Q92879 486 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-208ENST00000482272 STK31Q9BXU1 1019 aa17.31■□□□□ 0.36
CTDSP1-208ENST00000482272 MKRN1Q9UHC7 482 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-208ENST00000482272 NSFL1CQ9UNZ2 370 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-208ENST00000482272 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-208ENST00000482272 TNIP1Q15025 636 aa17.3■□□□□ 0.36
CTDSP1-208ENST00000482272 CIAPIN1Q6FI81 312 aa17.3■□□□□ 0.36
CTDSP1-208ENST00000482272 METTL22Q9BUU2 404 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-208ENST00000482272 CWC25Q9NXE8 425 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-208ENST00000482272 PCNTO95613 3336 aa17.3■□□□□ 0.36
CTDSP1-208ENST00000482272 PCCAP05165 728 aaPredicted RBP17.29■□□□□ 0.36
CTDSP1-208ENST00000482272 WASHC4Q2M389 1173 aa17.29■□□□□ 0.36
CTDSP1-208ENST00000482272 G2E3Q7L622 706 aa17.29■□□□□ 0.36
CTDSP1-208ENST00000482272 GPRC5DQ9NZD1 345 aa17.29■□□□□ 0.36
CTDSP1-208ENST00000482272 C6orf229H3BNL8 230 aa17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 PDE8AO60658 829 aa17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 TWISTNBQ3B726 338 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 KSR2Q6VAB6 950 aa17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 BCL2L13Q9BXK5 485 aa17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 ADARB2Q9NS39 739 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
CTDSP1-208ENST00000482272 IL16Q14005 1332 aa17.27■□□□□ 0.36
CTDSP1-208ENST00000482272 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.36
CTDSP1-208ENST00000482272 HSPA1AP0DMV8 641 aaKnown RBP17.27■□□□□ 0.36
CTDSP1-208ENST00000482272 HSPA1BP0DMV9 641 aaKnown RBP17.27■□□□□ 0.36
CTDSP1-208ENST00000482272 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
CTDSP1-208ENST00000482272 CCDC152Q4G0S7 254 aa17.27■□□□□ 0.36
CTDSP1-208ENST00000482272 EYA3Q99504 573 aa17.27■□□□□ 0.36
CTDSP1-208ENST00000482272 CNTNAP1P78357 1384 aa17.27■□□□□ 0.35
CTDSP1-208ENST00000482272 PI4KAP2A4QPH2 592 aa17.26■□□□□ 0.35
CTDSP1-208ENST00000482272 RAD17O75943 681 aa17.26■□□□□ 0.35
CTDSP1-208ENST00000482272 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
CTDSP1-208ENST00000482272 GMPSP49915 693 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-208ENST00000482272 GPSM2P81274 684 aa17.26■□□□□ 0.35
CTDSP1-208ENST00000482272 PI4KAP1Q8N8J0 262 aa17.26■□□□□ 0.35
CTDSP1-208ENST00000482272 SEC31BQ9NQW1 1179 aa17.26■□□□□ 0.35
CTDSP1-208ENST00000482272 CDHR2Q9BYE9 1310 aa17.25■□□□□ 0.35
CTDSP1-208ENST00000482272 YDJCA8MPS7 323 aa17.25■□□□□ 0.35
CTDSP1-208ENST00000482272 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
CTDSP1-208ENST00000482272 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
CTDSP1-208ENST00000482272 DEFB115Q30KQ5 88 aa17.25■□□□□ 0.35
CTDSP1-208ENST00000482272 POLLQ9UGP5 575 aa17.25■□□□□ 0.35
CTDSP1-208ENST00000482272 MYH3P11055 1940 aa17.25■□□□□ 0.35
CTDSP1-208ENST00000482272 H7C1D1 291 aa17.24■□□□□ 0.35
CTDSP1-208ENST00000482272 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTDSP1-208ENST00000482272 COL13A1Q5TAT6 717 aaPredicted RBP17.24■□□□□ 0.35
CTDSP1-208ENST00000482272 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
CTDSP1-208ENST00000482272 GPR101Q96P66 508 aaPredicted RBP17.24■□□□□ 0.35
CTDSP1-208ENST00000482272 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-208ENST00000482272 CNOT7Q9UIV1 285 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-208ENST00000482272 SCN9AQ15858 1988 aa17.23■□□□□ 0.35
CTDSP1-208ENST00000482272 G3V3G9 751 aa17.23■□□□□ 0.35
CTDSP1-208ENST00000482272 VEGFBP49765 207 aa17.23■□□□□ 0.35
CTDSP1-208ENST00000482272 DCAF8Q5TAQ9 597 aa17.23■□□□□ 0.35
CTDSP1-208ENST00000482272 TBC1D16Q8TBP0 767 aa17.23■□□□□ 0.35
CTDSP1-208ENST00000482272 DBNDD1Q9H9R9 158 aa17.23■□□□□ 0.35
CTDSP1-208ENST00000482272 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
CTDSP1-208ENST00000482272 ANKIB1Q9P2G1 1089 aa17.23■□□□□ 0.35
CTDSP1-208ENST00000482272 ABT1Q9ULW3 272 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-208ENST00000482272 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms