RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 SUPT20HQ8NEM7 779 aa30.31■■■□□ 2.44
TTC3-217ENST00000481605 RTFDC1Q9BY42 306 aaPredicted RBP30.31■■■□□ 2.44
TTC3-217ENST00000481605 VPS33BQ9H267 617 aa30.31■■■□□ 2.44
TTC3-217ENST00000481605 MPNDQ8N594 471 aa30.3■■■□□ 2.44
TTC3-217ENST00000481605 JMYQ8N9B5 988 aa30.3■■■□□ 2.44
TTC3-217ENST00000481605 SF3B3Q15393 1217 aaKnown RBP30.29■■■□□ 2.44
TTC3-217ENST00000481605 MYD88Q99836 296 aa30.29■■■□□ 2.44
TTC3-217ENST00000481605 IRS4O14654 1257 aaPredicted RBP30.28■■■□□ 2.44
TTC3-217ENST00000481605 TAF1P21675 1872 aa30.28■■■□□ 2.44
TTC3-217ENST00000481605 PNMA8AQ86V59 439 aaPredicted RBP30.27■■■□□ 2.44
TTC3-217ENST00000481605 CLEC11AQ9Y240 323 aa30.27■■■□□ 2.44
TTC3-217ENST00000481605 TMC4Q7Z404 712 aa30.27■■■□□ 2.44
TTC3-217ENST00000481605 ZBTB38Q8NAP3 1195 aaPredicted RBP30.27■■■□□ 2.44
TTC3-217ENST00000481605 PCNTO95613 3336 aa30.26■■■□□ 2.44
TTC3-217ENST00000481605 DDX58O95786 925 aaKnown RBP30.26■■■□□ 2.43
TTC3-217ENST00000481605 LMOD1P29536 600 aaPredicted RBP30.25■■■□□ 2.43
TTC3-217ENST00000481605 CELF1Q92879 486 aaKnown RBP30.25■■■□□ 2.43
TTC3-217ENST00000481605 CCDC191Q8NCU4 936 aa30.24■■■□□ 2.43
TTC3-217ENST00000481605 CREBZFQ9NS37 354 aa30.24■■■□□ 2.43
TTC3-217ENST00000481605 IL16Q14005 1332 aa30.23■■■□□ 2.43
TTC3-217ENST00000481605 PASKQ96RG2 1323 aa30.23■■■□□ 2.43
TTC3-217ENST00000481605 SCNN1DP51172 638 aa30.23■■■□□ 2.43
TTC3-217ENST00000481605 NCBP3Q53F19 620 aaKnown RBP30.23■■■□□ 2.43
TTC3-217ENST00000481605 METTL22Q9BUU2 404 aaPredicted RBP30.23■■■□□ 2.43
TTC3-217ENST00000481605 ZNRF3Q9ULT6 936 aa30.23■■■□□ 2.43
TTC3-217ENST00000481605 ADAMTSL1Q8N6G6 1762 aa30.23■■■□□ 2.43
TTC3-217ENST00000481605 KIAA2012Q0VF49 1180 aa30.22■■■□□ 2.43
TTC3-217ENST00000481605 ITGBL1O95965 494 aaPredicted RBP30.22■■■□□ 2.43
TTC3-217ENST00000481605 TWISTNBQ3B726 338 aaPredicted RBP30.22■■■□□ 2.43
TTC3-217ENST00000481605 STK31Q9BXU1 1019 aa30.22■■■□□ 2.43
TTC3-217ENST00000481605 CWC25Q9NXE8 425 aaPredicted RBP30.22■■■□□ 2.43
TTC3-217ENST00000481605 MAP3K2Q9Y2U5 619 aa30.22■■■□□ 2.43
TTC3-217ENST00000481605 LTBP1Q14766 1721 aa30.21■■■□□ 2.43
TTC3-217ENST00000481605 HSP90B1P14625 803 aaKnown RBP30.21■■■□□ 2.43
TTC3-217ENST00000481605 EPS15P42566 896 aa30.21■■■□□ 2.43
TTC3-217ENST00000481605 SALL2Q9Y467 1007 aaPredicted RBP30.21■■■□□ 2.43
TTC3-217ENST00000481605 LRRC37AA6NMS7 1700 aa30.21■■■□□ 2.43
TTC3-217ENST00000481605 PCCAP05165 728 aaPredicted RBP30.2■■■□□ 2.42
TTC3-217ENST00000481605 CXCL9Q07325 125 aa30.2■■■□□ 2.42
TTC3-217ENST00000481605 MAP1SQ66K74 1059 aaPredicted RBP30.19■■■□□ 2.42
TTC3-217ENST00000481605 NSFL1CQ9UNZ2 370 aaKnown RBP30.19■■■□□ 2.42
TTC3-217ENST00000481605 DUOX1Q9NRD9 1551 aa30.19■■■□□ 2.42
TTC3-217ENST00000481605 COL4A1P02462 1669 aa30.18■■■□□ 2.42
TTC3-217ENST00000481605 PI4KAP2A4QPH2 592 aa30.18■■■□□ 2.42
TTC3-217ENST00000481605 KSR2Q6VAB6 950 aa30.18■■■□□ 2.42
TTC3-217ENST00000481605 CNTROBQ8N137 903 aa30.18■■■□□ 2.42
TTC3-217ENST00000481605 PI4KAP1Q8N8J0 262 aa30.18■■■□□ 2.42
TTC3-217ENST00000481605 JARID2Q92833 1246 aaPredicted RBP30.18■■■□□ 2.42
TTC3-217ENST00000481605 RPS8P62241 208 aaKnown RBP30.17■■■□□ 2.42
TTC3-217ENST00000481605 MKRN1Q9UHC7 482 aaKnown RBP30.16■■■□□ 2.42
TTC3-217ENST00000481605 FANCIQ9NVI1 1328 aa30.15■■■□□ 2.42
TTC3-217ENST00000481605 PDE8AO60658 829 aa30.15■■■□□ 2.42
TTC3-217ENST00000481605 CIAPIN1Q6FI81 312 aa30.15■■■□□ 2.42
TTC3-217ENST00000481605 SEC31BQ9NQW1 1179 aa30.15■■■□□ 2.42
TTC3-217ENST00000481605 GPRC5DQ9NZD1 345 aa30.15■■■□□ 2.42
TTC3-217ENST00000481605 RAD17O75943 681 aa30.14■■■□□ 2.42
TTC3-217ENST00000481605 SLC4A2P04920 1241 aa30.14■■■□□ 2.42
TTC3-217ENST00000481605 GPSM2P81274 684 aa30.14■■■□□ 2.42
TTC3-217ENST00000481605 WASHC4Q2M389 1173 aa30.14■■■□□ 2.42
TTC3-217ENST00000481605 CCDC152Q4G0S7 254 aa30.14■■■□□ 2.42
TTC3-217ENST00000481605 USP50Q70EL3 339 aaPredicted RBP30.14■■■□□ 2.42
TTC3-217ENST00000481605 G2E3Q7L622 706 aa30.14■■■□□ 2.42
TTC3-217ENST00000481605 WDR63Q8IWG1 891 aa30.14■■■□□ 2.42
TTC3-217ENST00000481605 TMEM88BA6NKF7 163 aa30.13■■■□□ 2.41
TTC3-217ENST00000481605 IGKV5-2P06315 115 aa30.13■■■□□ 2.41
TTC3-217ENST00000481605 IFFO2Q5TF58 517 aa30.13■■■□□ 2.41
TTC3-217ENST00000481605 POLLQ9UGP5 575 aa30.13■■■□□ 2.41
TTC3-217ENST00000481605 YDJCA8MPS7 323 aa30.12■■■□□ 2.41
TTC3-217ENST00000481605 C6orf229H3BNL8 230 aa30.12■■■□□ 2.41
TTC3-217ENST00000481605 GMPSP49915 693 aaPredicted RBP30.12■■■□□ 2.41
TTC3-217ENST00000481605 NEXNQ0ZGT2 675 aa30.12■■■□□ 2.41
TTC3-217ENST00000481605 TNIP1Q15025 636 aa30.12■■■□□ 2.41
TTC3-217ENST00000481605 CCDC85AQ96PX6 553 aaPredicted RBP30.12■■■□□ 2.41
TTC3-217ENST00000481605 ADARB2Q9NS39 739 aaKnown RBP30.12■■■□□ 2.41
TTC3-217ENST00000481605 RIMBP2O15034 1052 aa30.11■■■□□ 2.41
TTC3-217ENST00000481605 FAM9BQ8IZU0 186 aa30.11■■■□□ 2.41
TTC3-217ENST00000481605 BCL2L13Q9BXK5 485 aa30.1■■■□□ 2.41
TTC3-217ENST00000481605 CDHR2Q9BYE9 1310 aa30.1■■■□□ 2.41
TTC3-217ENST00000481605 CWF19L2Q2TBE0 894 aaKnown RBP30.09■■■□□ 2.41
TTC3-217ENST00000481605 DBNDD1Q9H9R9 158 aa30.09■■■□□ 2.41
TTC3-217ENST00000481605 CNTNAP1P78357 1384 aa30.09■■■□□ 2.41
TTC3-217ENST00000481605 TBC1D16Q8TBP0 767 aa30.08■■■□□ 2.41
TTC3-217ENST00000481605 EYA3Q99504 573 aa30.08■■■□□ 2.41
TTC3-217ENST00000481605 NEURL1BA8MQ27 555 aa30.07■■■□□ 2.4
TTC3-217ENST00000481605 FLIIQ13045 1269 aa30.07■■■□□ 2.4
TTC3-217ENST00000481605 VAMP4O75379 141 aa30.06■■■□□ 2.4
TTC3-217ENST00000481605 HSPA1AP0DMV8 641 aaKnown RBP30.06■■■□□ 2.4
TTC3-217ENST00000481605 HSPA1BP0DMV9 641 aaKnown RBP30.06■■■□□ 2.4
TTC3-217ENST00000481605 EXOSC9Q06265 439 aaKnown RBP30.06■■■□□ 2.4
TTC3-217ENST00000481605 GPR101Q96P66 508 aaPredicted RBP30.06■■■□□ 2.4
TTC3-217ENST00000481605 PODXL2Q9NZ53 605 aa30.06■■■□□ 2.4
TTC3-217ENST00000481605 ANKIB1Q9P2G1 1089 aa30.06■■■□□ 2.4
TTC3-217ENST00000481605 CTSWP56202 376 aa30.06■■■□□ 2.4
TTC3-217ENST00000481605 ANKRD18AQ8IVF6 992 aa30.05■■■□□ 2.4
TTC3-217ENST00000481605 FKBP5Q13451 457 aaPredicted RBP30.04■■■□□ 2.4
TTC3-217ENST00000481605 DOK7Q18PE1 504 aa30.04■■■□□ 2.4
TTC3-217ENST00000481605 SPINK5Q9NQ38 1064 aaPredicted RBP30.04■■■□□ 2.4
TTC3-217ENST00000481605 PSMD14O00487 310 aa30.03■■■□□ 2.4
TTC3-217ENST00000481605 ECE2O60344 883 aa30.03■■■□□ 2.4
TTC3-217ENST00000481605 UFL1O94874 794 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms