RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 ZBTB38Q8NAP3 1195 aaPredicted RBP19.17■□□□□ 0.66
LIMS4-202ENST00000480598 JARID2Q92833 1246 aaPredicted RBP19.17■□□□□ 0.66
LIMS4-202ENST00000480598 METTL22Q9BUU2 404 aaPredicted RBP19.17■□□□□ 0.66
LIMS4-202ENST00000480598 STK31Q9BXU1 1019 aa19.17■□□□□ 0.66
LIMS4-202ENST00000480598 TAF1DQ9H5J8 278 aaPredicted RBP19.17■□□□□ 0.66
LIMS4-202ENST00000480598 MAP3K2Q9Y2U5 619 aa19.17■□□□□ 0.66
LIMS4-202ENST00000480598 EIF6P56537 245 aaKnown RBP19.16■□□□□ 0.66
LIMS4-202ENST00000480598 DPP8Q6V1X1 898 aaPredicted RBP19.16■□□□□ 0.66
LIMS4-202ENST00000480598 G2E3Q7L622 706 aa19.16■□□□□ 0.66
LIMS4-202ENST00000480598 WDR63Q8IWG1 891 aa19.16■□□□□ 0.66
LIMS4-202ENST00000480598 MPNDQ8N594 471 aa19.16■□□□□ 0.66
LIMS4-202ENST00000480598 CCDC191Q8NCU4 936 aa19.16■□□□□ 0.66
LIMS4-202ENST00000480598 CELF1Q92879 486 aaKnown RBP19.16■□□□□ 0.66
LIMS4-202ENST00000480598 GJA3Q9Y6H8 435 aa19.16■□□□□ 0.66
LIMS4-202ENST00000480598 PI4KAP2A4QPH2 592 aa19.15■□□□□ 0.66
LIMS4-202ENST00000480598 CHADLQ6NUI6 762 aa19.15■□□□□ 0.66
LIMS4-202ENST00000480598 NIM1KQ8IY84 436 aa19.15■□□□□ 0.66
LIMS4-202ENST00000480598 GPC2Q8N158 579 aa19.15■□□□□ 0.66
LIMS4-202ENST00000480598 PI4KAP1Q8N8J0 262 aa19.15■□□□□ 0.66
LIMS4-202ENST00000480598 RTFDC1Q9BY42 306 aaPredicted RBP19.15■□□□□ 0.66
LIMS4-202ENST00000480598 CWC25Q9NXE8 425 aaPredicted RBP19.15■□□□□ 0.66
LIMS4-202ENST00000480598 HACL1Q9UJ83 578 aa19.15■□□□□ 0.66
LIMS4-202ENST00000480598 LRRC37AA6NMS7 1700 aa19.14■□□□□ 0.66
LIMS4-202ENST00000480598 KSR2Q6VAB6 950 aa19.14■□□□□ 0.65
LIMS4-202ENST00000480598 SUPT20HQ8NEM7 779 aa19.14■□□□□ 0.65
LIMS4-202ENST00000480598 SPINK5Q9NQ38 1064 aaPredicted RBP19.14■□□□□ 0.65
LIMS4-202ENST00000480598 DUOX1Q9NRD9 1551 aa19.14■□□□□ 0.65
LIMS4-202ENST00000480598 SLC4A2P04920 1241 aa19.13■□□□□ 0.65
LIMS4-202ENST00000480598 PCCAP05165 728 aaPredicted RBP19.13■□□□□ 0.65
LIMS4-202ENST00000480598 IGKV5-2P06315 115 aa19.13■□□□□ 0.65
LIMS4-202ENST00000480598 EPHX2P34913 555 aa19.13■□□□□ 0.65
LIMS4-202ENST00000480598 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
LIMS4-202ENST00000480598 EAPPQ56P03 285 aaPredicted RBP19.13■□□□□ 0.65
LIMS4-202ENST00000480598 TMC4Q7Z404 712 aa19.13■□□□□ 0.65
LIMS4-202ENST00000480598 LTBP1Q14766 1721 aa19.12■□□□□ 0.65
LIMS4-202ENST00000480598 LDHDQ86WU2 507 aa19.12■□□□□ 0.65
LIMS4-202ENST00000480598 VAMP4O75379 141 aa19.11■□□□□ 0.65
LIMS4-202ENST00000480598 KLRG1Q96E93 195 aa19.11■□□□□ 0.65
LIMS4-202ENST00000480598 CCDC85AQ96PX6 553 aaPredicted RBP19.11■□□□□ 0.65
LIMS4-202ENST00000480598 VPS33BQ9H267 617 aa19.11■□□□□ 0.65
LIMS4-202ENST00000480598 SEC31BQ9NQW1 1179 aa19.11■□□□□ 0.65
LIMS4-202ENST00000480598 SCNN1DP51172 638 aa19.1■□□□□ 0.65
LIMS4-202ENST00000480598 KIAA2012Q0VF49 1180 aa19.1■□□□□ 0.65
LIMS4-202ENST00000480598 FLIIQ13045 1269 aa19.1■□□□□ 0.65
LIMS4-202ENST00000480598 CWF19L2Q2TBE0 894 aaKnown RBP19.1■□□□□ 0.65
LIMS4-202ENST00000480598 NSFL1CQ9UNZ2 370 aaKnown RBP19.1■□□□□ 0.65
LIMS4-202ENST00000480598 CLEC11AQ9Y240 323 aa19.1■□□□□ 0.65
LIMS4-202ENST00000480598 ADAMTSL1Q8N6G6 1762 aa19.1■□□□□ 0.65
LIMS4-202ENST00000480598 PDE8AO60658 829 aa19.09■□□□□ 0.65
LIMS4-202ENST00000480598 HSP90B1P14625 803 aaKnown RBP19.09■□□□□ 0.65
LIMS4-202ENST00000480598 RPS8P62241 208 aaKnown RBP19.09■□□□□ 0.65
LIMS4-202ENST00000480598 GPSM2P81274 684 aa19.09■□□□□ 0.65
LIMS4-202ENST00000480598 CXCL9Q07325 125 aa19.09■□□□□ 0.65
LIMS4-202ENST00000480598 NEXNQ0ZGT2 675 aa19.09■□□□□ 0.65
LIMS4-202ENST00000480598 ZNRF3Q9ULT6 936 aa19.09■□□□□ 0.65
LIMS4-202ENST00000480598 NEURL1BA8MQ27 555 aa19.08■□□□□ 0.64
LIMS4-202ENST00000480598 LMOD1P29536 600 aaPredicted RBP19.08■□□□□ 0.64
LIMS4-202ENST00000480598 EPS15P42566 896 aa19.08■□□□□ 0.64
LIMS4-202ENST00000480598 CCDC152Q4G0S7 254 aa19.08■□□□□ 0.64
LIMS4-202ENST00000480598 CDHR2Q9BYE9 1310 aa19.07■□□□□ 0.64
LIMS4-202ENST00000480598 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
LIMS4-202ENST00000480598 PNMA8AQ86V59 439 aaPredicted RBP19.07■□□□□ 0.64
LIMS4-202ENST00000480598 POLLQ9UGP5 575 aa19.07■□□□□ 0.64
LIMS4-202ENST00000480598 CACNA1FO60840 1977 aa19.06■□□□□ 0.64
LIMS4-202ENST00000480598 YDJCA8MPS7 323 aa19.06■□□□□ 0.64
LIMS4-202ENST00000480598 C6orf229H3BNL8 230 aa19.06■□□□□ 0.64
LIMS4-202ENST00000480598 RAD17O75943 681 aa19.06■□□□□ 0.64
LIMS4-202ENST00000480598 GPR101Q96P66 508 aaPredicted RBP19.06■□□□□ 0.64
LIMS4-202ENST00000480598 MYH16Q9H6N6 1097 aa19.06■□□□□ 0.64
LIMS4-202ENST00000480598 PASKQ96RG2 1323 aa19.05■□□□□ 0.64
LIMS4-202ENST00000480598 RIMBP2O15034 1052 aa19.05■□□□□ 0.64
LIMS4-202ENST00000480598 CTSWP56202 376 aa19.05■□□□□ 0.64
LIMS4-202ENST00000480598 WASHC4Q2M389 1173 aa19.05■□□□□ 0.64
LIMS4-202ENST00000480598 MAP1SQ66K74 1059 aaPredicted RBP19.05■□□□□ 0.64
LIMS4-202ENST00000480598 CIAPIN1Q6FI81 312 aa19.05■□□□□ 0.64
LIMS4-202ENST00000480598 DNAAF4Q8WXU2 420 aa19.05■□□□□ 0.64
LIMS4-202ENST00000480598 ZNF521Q96K83 1311 aa19.04■□□□□ 0.64
LIMS4-202ENST00000480598 ITGBL1O95965 494 aaPredicted RBP19.04■□□□□ 0.64
LIMS4-202ENST00000480598 GMPSP49915 693 aaPredicted RBP19.04■□□□□ 0.64
LIMS4-202ENST00000480598 UBE3BQ7Z3V4 1068 aa19.04■□□□□ 0.64
LIMS4-202ENST00000480598 TBC1D16Q8TBP0 767 aa19.04■□□□□ 0.64
LIMS4-202ENST00000480598 DBNDD1Q9H9R9 158 aa19.04■□□□□ 0.64
LIMS4-202ENST00000480598 MYH3P11055 1940 aa19.04■□□□□ 0.64
LIMS4-202ENST00000480598 H7C1W4 665 aa19.03■□□□□ 0.64
LIMS4-202ENST00000480598 GCKRQ14397 625 aa19.03■□□□□ 0.64
LIMS4-202ENST00000480598 CNTROBQ8N137 903 aa19.03■□□□□ 0.64
LIMS4-202ENST00000480598 JMYQ8N9B5 988 aa19.03■□□□□ 0.64
LIMS4-202ENST00000480598 TTLL11Q8NHH1 800 aa19.03■□□□□ 0.64
LIMS4-202ENST00000480598 CREBZFQ9NS37 354 aa19.03■□□□□ 0.64
LIMS4-202ENST00000480598 GPRC5DQ9NZD1 345 aa19.03■□□□□ 0.64
LIMS4-202ENST00000480598 PCNTO95613 3336 aa19.02■□□□□ 0.64
LIMS4-202ENST00000480598 F6X3S4 739 aa19.02■□□□□ 0.64
LIMS4-202ENST00000480598 DOK7Q18PE1 504 aa19.02■□□□□ 0.64
LIMS4-202ENST00000480598 ANKRD18AQ8IVF6 992 aa19.02■□□□□ 0.64
LIMS4-202ENST00000480598 GREM2Q9H772 168 aa19.02■□□□□ 0.64
LIMS4-202ENST00000480598 UFL1O94874 794 aa19.01■□□□□ 0.63
LIMS4-202ENST00000480598 TNIP1Q15025 636 aa19.01■□□□□ 0.63
LIMS4-202ENST00000480598 USP50Q70EL3 339 aaPredicted RBP19.01■□□□□ 0.63
LIMS4-202ENST00000480598 LINS1Q8NG48 757 aa19.01■□□□□ 0.63
LIMS4-202ENST00000480598 EYA3Q99504 573 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms