RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
CHD6-208ENST00000480022 PSMD1Q99460 953 aa12.87□□□□□ -0.35
CHD6-208ENST00000480022 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
CHD6-208ENST00000480022 PCDH11XQ9BZA7 1347 aa12.87□□□□□ -0.35
CHD6-208ENST00000480022 PCDH11YQ9BZA8 1340 aa12.87□□□□□ -0.35
CHD6-208ENST00000480022 NOP2P46087 812 aaKnown RBP12.87□□□□□ -0.35
CHD6-208ENST00000480022 CTR9Q6PD62 1173 aa12.87□□□□□ -0.35
CHD6-208ENST00000480022 CNPY2Q9Y2B0 182 aa12.87□□□□□ -0.35
CHD6-208ENST00000480022 PHKG2P15735 406 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 ELF2Q15723 593 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 MUM1L1Q5H9M0 696 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 SRCIN1Q9C0H9 1055 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHD6-208ENST00000480022 V9GYY5 206 aaPredicted RBP12.86□□□□□ -0.35
CHD6-208ENST00000480022 LRRC37A3O60309 1634 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 RPAP1Q9BWH6 1393 aaPredicted RBP12.86□□□□□ -0.35
CHD6-208ENST00000480022 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 RNF20Q5VTR2 975 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 ZSCAN25Q6NSZ9 544 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 DRC7Q8IY82 874 aa12.86□□□□□ -0.35
CHD6-208ENST00000480022 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 C1orf141Q5JVX7 400 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 TEX35Q5T0J7 233 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 C16orf71Q8IYS4 520 aaPredicted RBP12.85□□□□□ -0.35
CHD6-208ENST00000480022 IFNL2Q8IZJ0 200 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 TXLNBQ8N3L3 684 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 ARHGAP45Q92619 1136 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 DCTPP1Q9H773 170 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 DHX16O60231 1041 aaKnown RBP12.85□□□□□ -0.35
CHD6-208ENST00000480022 GTF2A1P52655 376 aaPredicted RBP12.85□□□□□ -0.35
CHD6-208ENST00000480022 NOL8Q76FK4 1167 aaKnown RBP12.85□□□□□ -0.35
CHD6-208ENST00000480022 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
CHD6-208ENST00000480022 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
CHD6-208ENST00000480022 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
CHD6-208ENST00000480022 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
CHD6-208ENST00000480022 FAM200AQ8TCP9 573 aa12.84□□□□□ -0.35
CHD6-208ENST00000480022 MAP3K5Q99683 1374 aa12.84□□□□□ -0.35
CHD6-208ENST00000480022 RGS12O14924 1447 aa12.84□□□□□ -0.35
CHD6-208ENST00000480022 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
CHD6-208ENST00000480022 HDAC5Q9UQL6 1122 aa12.84□□□□□ -0.35
CHD6-208ENST00000480022 CCDC171Q6TFL3 1326 aa12.84□□□□□ -0.35
CHD6-208ENST00000480022 PSEN1P49768 467 aa12.83□□□□□ -0.36
CHD6-208ENST00000480022 NKX1-1Q15270 411 aaPredicted RBP12.83□□□□□ -0.36
CHD6-208ENST00000480022 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
CHD6-208ENST00000480022 SHANK3Q9BYB0 1731 aa12.83□□□□□ -0.36
CHD6-208ENST00000480022 SLU7O95391 586 aaKnown RBP12.83□□□□□ -0.36
CHD6-208ENST00000480022 MCCP23508 829 aa12.83□□□□□ -0.36
CHD6-208ENST00000480022 DCTN1Q14203 1278 aa12.83□□□□□ -0.36
CHD6-208ENST00000480022 SYT10Q6XYQ8 523 aa12.83□□□□□ -0.36
CHD6-208ENST00000480022 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.83□□□□□ -0.36
CHD6-208ENST00000480022 OTUD7AQ8TE49 926 aaPredicted RBP12.83□□□□□ -0.36
CHD6-208ENST00000480022 NRBP1Q9UHY1 535 aa12.83□□□□□ -0.36
CHD6-208ENST00000480022 CASQ1P31415 396 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 ICE2Q659A1 982 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 MCM10Q7L590 875 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 NEK11Q8NG66 645 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 FHOD1Q9Y613 1164 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 CLGNO14967 610 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 PTPN14Q15678 1187 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 IL17REQ8NFR9 667 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 ABCC4O15439 1325 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 PTPRCP08575 1304 aa12.82□□□□□ -0.36
CHD6-208ENST00000480022 MYO1CO00159 1063 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 KDM6AO15550 1401 aaPredicted RBP12.81□□□□□ -0.36
CHD6-208ENST00000480022 FIBPO43427 364 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 H2AFXP16104 143 aaPredicted RBP12.81□□□□□ -0.36
CHD6-208ENST00000480022 TPM4P67936 248 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 KRBA2Q6ZNG9 492 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 KRT27Q7Z3Y8 459 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 C10orf67Q8IYJ2 551 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 MRPL50Q8N5N7 158 aaKnown RBP12.81□□□□□ -0.36
CHD6-208ENST00000480022 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 DCAF5Q96JK2 942 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 THUMPD2Q9BTF0 503 aaKnown RBP12.81□□□□□ -0.36
CHD6-208ENST00000480022 LOC102724159A0A0B4J2E5 919 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 RNMTO43148 476 aaKnown RBP12.81□□□□□ -0.36
CHD6-208ENST00000480022 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
CHD6-208ENST00000480022 PWP2Q15269 919 aaKnown RBP12.81□□□□□ -0.36
CHD6-208ENST00000480022 FAM182BQ5T319 152 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
CHD6-208ENST00000480022 ZNF75DP51815 510 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 ANAPC15P60006 121 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
CHD6-208ENST00000480022 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 ATP6V1DQ9Y5K8 247 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 PNMA6AP0CW24 399 aaPredicted RBP12.8□□□□□ -0.36
CHD6-208ENST00000480022 PLA2G4AP47712 749 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 NYAP1Q6ZVC0 841 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 LUZP1Q86V48 1076 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 PLA2G4DQ86XP0 818 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 CEMIPQ8WUJ3 1361 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 APPP05067 770 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 MYCBPQ99417 103 aaPredicted RBP12.8□□□□□ -0.36
CHD6-208ENST00000480022 BRMS1Q9HCU9 246 aa12.8□□□□□ -0.36
CHD6-208ENST00000480022 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms