RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
SP140-210ENST00000479539 RTL5Q5HYW3 569 aaPredicted RBP13.48□□□□□ -0.25
SP140-210ENST00000479539 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
SP140-210ENST00000479539 SP8Q8IXZ3 490 aa13.48□□□□□ -0.25
SP140-210ENST00000479539 IARSP41252 1262 aaKnown RBP13.47□□□□□ -0.25
SP140-210ENST00000479539 FKBP5Q13451 457 aaPredicted RBP13.47□□□□□ -0.25
SP140-210ENST00000479539 TMC4Q7Z404 712 aa13.47□□□□□ -0.25
SP140-210ENST00000479539 SLC51AQ86UW1 340 aa13.47□□□□□ -0.25
SP140-210ENST00000479539 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
SP140-210ENST00000479539 MIER1Q8N108 512 aa13.47□□□□□ -0.25
SP140-210ENST00000479539 DNAAF4Q8WXU2 420 aa13.47□□□□□ -0.25
SP140-210ENST00000479539 TMX4Q9H1E5 349 aaPredicted RBP13.47□□□□□ -0.25
SP140-210ENST00000479539 RRAGCQ9HB90 399 aa13.47□□□□□ -0.25
SP140-210ENST00000479539 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
SP140-210ENST00000479539 NEURL1BA8MQ27 555 aa13.46□□□□□ -0.25
SP140-210ENST00000479539 ABCB7O75027 752 aa13.46□□□□□ -0.25
SP140-210ENST00000479539 TOMM70O94826 608 aa13.46□□□□□ -0.25
SP140-210ENST00000479539 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
SP140-210ENST00000479539 RTFDC1Q9BY42 306 aaPredicted RBP13.46□□□□□ -0.25
SP140-210ENST00000479539 CDHR2Q9BYE9 1310 aa13.45□□□□□ -0.26
SP140-210ENST00000479539 H7C1W4 665 aa13.45□□□□□ -0.26
SP140-210ENST00000479539 PDE8AO60658 829 aa13.45□□□□□ -0.26
SP140-210ENST00000479539 CWF19L2Q2TBE0 894 aaKnown RBP13.45□□□□□ -0.26
SP140-210ENST00000479539 LINS1Q8NG48 757 aa13.45□□□□□ -0.26
SP140-210ENST00000479539 CELF1Q92879 486 aaKnown RBP13.45□□□□□ -0.26
SP140-210ENST00000479539 CDCA7LQ96GN5 454 aa13.45□□□□□ -0.26
SP140-210ENST00000479539 VPS33BQ9H267 617 aa13.45□□□□□ -0.26
SP140-210ENST00000479539 POTECB2RU33 542 aa13.44□□□□□ -0.26
SP140-210ENST00000479539 FZD9O00144 591 aa13.44□□□□□ -0.26
SP140-210ENST00000479539 VEGFAP15692 232 aaPredicted RBP13.44□□□□□ -0.26
SP140-210ENST00000479539 RPS8P62241 208 aaKnown RBP13.44□□□□□ -0.26
SP140-210ENST00000479539 GCKRQ14397 625 aa13.44□□□□□ -0.26
SP140-210ENST00000479539 CCDC152Q4G0S7 254 aa13.44□□□□□ -0.26
SP140-210ENST00000479539 MPNDQ8N594 471 aa13.44□□□□□ -0.26
SP140-210ENST00000479539 F6X3S4 739 aa13.43□□□□□ -0.26
SP140-210ENST00000479539 DDNO94850 711 aaPredicted RBP13.43□□□□□ -0.26
SP140-210ENST00000479539 BEND3Q5T5X7 828 aa13.43□□□□□ -0.26
SP140-210ENST00000479539 DPP8Q6V1X1 898 aaPredicted RBP13.43□□□□□ -0.26
SP140-210ENST00000479539 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
SP140-210ENST00000479539 JDP2Q8WYK2 163 aa13.43□□□□□ -0.26
SP140-210ENST00000479539 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
SP140-210ENST00000479539 CASP7P55210 303 aa13.42□□□□□ -0.26
SP140-210ENST00000479539 CTSWP56202 376 aa13.42□□□□□ -0.26
SP140-210ENST00000479539 C16orf71Q8IYS4 520 aaPredicted RBP13.42□□□□□ -0.26
SP140-210ENST00000479539 LARGE2Q8N3Y3 721 aa13.42□□□□□ -0.26
SP140-210ENST00000479539 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
SP140-210ENST00000479539 SUPT20HQ8NEM7 779 aa13.42□□□□□ -0.26
SP140-210ENST00000479539 L3MBTL3Q96JM7 780 aaPredicted RBP13.42□□□□□ -0.26
SP140-210ENST00000479539 PLA2G12BQ9BX93 195 aa13.42□□□□□ -0.26
SP140-210ENST00000479539 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
SP140-210ENST00000479539 TTLL11Q8NHH1 800 aa13.41□□□□□ -0.26
SP140-210ENST00000479539 SSH1Q8WYL5 1049 aa13.41□□□□□ -0.26
SP140-210ENST00000479539 FER1L6Q2WGJ9 1857 aa13.41□□□□□ -0.26
SP140-210ENST00000479539 ZNF541Q9H0D2 1346 aa13.4□□□□□ -0.26
SP140-210ENST00000479539 SBF1O95248 1867 aa13.4□□□□□ -0.26
SP140-210ENST00000479539 PPIP5K2O43314 1243 aa13.4□□□□□ -0.26
SP140-210ENST00000479539 CT47B1P0C2W7 299 aaPredicted RBP13.4□□□□□ -0.26
SP140-210ENST00000479539 KIAA2012Q0VF49 1180 aa13.4□□□□□ -0.26
SP140-210ENST00000479539 FSTL1Q12841 308 aa13.4□□□□□ -0.26
SP140-210ENST00000479539 POLA2Q14181 598 aa13.4□□□□□ -0.26
SP140-210ENST00000479539 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
SP140-210ENST00000479539 CSF1RP07333 972 aa13.39□□□□□ -0.27
SP140-210ENST00000479539 HSPA6P17066 643 aa13.39□□□□□ -0.27
SP140-210ENST00000479539 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
SP140-210ENST00000479539 GPSM2P81274 684 aa13.39□□□□□ -0.27
SP140-210ENST00000479539 AOC3Q16853 763 aa13.39□□□□□ -0.27
SP140-210ENST00000479539 ALDH1L2Q3SY69 923 aa13.39□□□□□ -0.27
SP140-210ENST00000479539 NIM1KQ8IY84 436 aa13.39□□□□□ -0.27
SP140-210ENST00000479539 GPC2Q8N158 579 aa13.39□□□□□ -0.27
SP140-210ENST00000479539 CCDC85AQ96PX6 553 aaPredicted RBP13.39□□□□□ -0.27
SP140-210ENST00000479539 PODXL2Q9NZ53 605 aa13.39□□□□□ -0.27
SP140-210ENST00000479539 NSFL1CQ9UNZ2 370 aaKnown RBP13.39□□□□□ -0.27
SP140-210ENST00000479539 ANKRD36CQ5JPF3 1778 aa13.39□□□□□ -0.27
SP140-210ENST00000479539 RTL9Q8NET4 1388 aa13.38□□□□□ -0.27
SP140-210ENST00000479539 IQCA1LA6NCM1 817 aa13.38□□□□□ -0.27
SP140-210ENST00000479539 ALDH1L1O75891 902 aa13.38□□□□□ -0.27
SP140-210ENST00000479539 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
SP140-210ENST00000479539 SMC1BQ8NDV3 1235 aa13.38□□□□□ -0.27
SP140-210ENST00000479539 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
SP140-210ENST00000479539 GREM2Q9H772 168 aa13.38□□□□□ -0.27
SP140-210ENST00000479539 POLLQ9UGP5 575 aa13.38□□□□□ -0.27
SP140-210ENST00000479539 ZNRF3Q9ULT6 936 aa13.38□□□□□ -0.27
SP140-210ENST00000479539 PTPRCP08575 1304 aa13.38□□□□□ -0.27
SP140-210ENST00000479539 TBC1D16Q8TBP0 767 aa13.37□□□□□ -0.27
SP140-210ENST00000479539 SRCIN1Q9C0H9 1055 aa13.37□□□□□ -0.27
SP140-210ENST00000479539 TAF1DQ9H5J8 278 aaPredicted RBP13.37□□□□□ -0.27
SP140-210ENST00000479539 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
SP140-210ENST00000479539 GRM8O00222 908 aa13.36□□□□□ -0.27
SP140-210ENST00000479539 BRPF1P55201 1214 aaPredicted RBP13.36□□□□□ -0.27
SP140-210ENST00000479539 WASHC4Q2M389 1173 aa13.36□□□□□ -0.27
SP140-210ENST00000479539 SLC4A10Q6U841 1118 aa13.36□□□□□ -0.27
SP140-210ENST00000479539 COL4A5P29400 1685 aa13.36□□□□□ -0.27
SP140-210ENST00000479539 C6orf229H3BNL8 230 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 ITGA6P23229 1130 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 FOXO4P98177 505 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 CXCL9Q07325 125 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 EYA3Q99504 573 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 BCL2L13Q9BXK5 485 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
SP140-210ENST00000479539 C9orf78Q9NZ63 289 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms