RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 TMX4Q9H1E5 349 aaPredicted RBP28.43■■■□□ 2.14
MCF2L2-210ENST00000478652 MKRN1Q9UHC7 482 aaKnown RBP28.43■■■□□ 2.14
MCF2L2-210ENST00000478652 CALD1Q05682 793 aaKnown RBP28.42■■■□□ 2.14
MCF2L2-210ENST00000478652 MAP1SQ66K74 1059 aaPredicted RBP28.42■■■□□ 2.14
MCF2L2-210ENST00000478652 EPS15P42566 896 aa28.41■■■□□ 2.14
MCF2L2-210ENST00000478652 DPP8Q6V1X1 898 aaPredicted RBP28.41■■■□□ 2.14
MCF2L2-210ENST00000478652 PNMA8AQ86V59 439 aaPredicted RBP28.41■■■□□ 2.14
MCF2L2-210ENST00000478652 MPNDQ8N594 471 aa28.41■■■□□ 2.14
MCF2L2-210ENST00000478652 MYH3P11055 1940 aa28.4■■■□□ 2.14
MCF2L2-210ENST00000478652 RIC3Q7Z5B4 369 aa28.39■■■□□ 2.14
MCF2L2-210ENST00000478652 TSPYL6Q8N831 410 aa28.39■■■□□ 2.14
MCF2L2-210ENST00000478652 SUPT20HQ8NEM7 779 aa28.39■■■□□ 2.14
MCF2L2-210ENST00000478652 CELF1Q92879 486 aaKnown RBP28.39■■■□□ 2.14
MCF2L2-210ENST00000478652 HSPA1AP0DMV8 641 aaKnown RBP28.38■■■□□ 2.13
MCF2L2-210ENST00000478652 HSPA1BP0DMV9 641 aaKnown RBP28.38■■■□□ 2.13
MCF2L2-210ENST00000478652 LMOD1P29536 600 aaPredicted RBP28.38■■■□□ 2.13
MCF2L2-210ENST00000478652 GOLGA2Q08379 1002 aa28.38■■■□□ 2.13
MCF2L2-210ENST00000478652 TRIM28Q13263 835 aaKnown RBP28.38■■■□□ 2.13
MCF2L2-210ENST00000478652 SF3B3Q15393 1217 aaKnown RBP28.38■■■□□ 2.13
MCF2L2-210ENST00000478652 VPS33BQ9H267 617 aa28.38■■■□□ 2.13
MCF2L2-210ENST00000478652 SPEF2Q9C093 1822 aa28.38■■■□□ 2.13
MCF2L2-210ENST00000478652 CXCL9Q07325 125 aa28.37■■■□□ 2.13
MCF2L2-210ENST00000478652 KIAA2012Q0VF49 1180 aa28.37■■■□□ 2.13
MCF2L2-210ENST00000478652 COL13A1Q5TAT6 717 aaPredicted RBP28.37■■■□□ 2.13
MCF2L2-210ENST00000478652 CNTROBQ8N137 903 aa28.37■■■□□ 2.13
MCF2L2-210ENST00000478652 TSR2Q969E8 191 aaKnown RBP28.37■■■□□ 2.13
MCF2L2-210ENST00000478652 ZNRF3Q9ULT6 936 aa28.37■■■□□ 2.13
MCF2L2-210ENST00000478652 CNTNAP1P78357 1384 aa28.37■■■□□ 2.13
MCF2L2-210ENST00000478652 IRS4O14654 1257 aaPredicted RBP28.36■■■□□ 2.13
MCF2L2-210ENST00000478652 MYD88Q99836 296 aa28.36■■■□□ 2.13
MCF2L2-210ENST00000478652 TMEM88BA6NKF7 163 aa28.35■■■□□ 2.13
MCF2L2-210ENST00000478652 SCN9AQ15858 1988 aa28.35■■■□□ 2.13
MCF2L2-210ENST00000478652 CACNA1FO60840 1977 aa28.33■■■□□ 2.13
MCF2L2-210ENST00000478652 FMR1Q06787 632 aaKnown RBP eCLIP28.33■■■□□ 2.13
MCF2L2-210ENST00000478652 TMC4Q7Z404 712 aa28.33■■■□□ 2.13
MCF2L2-210ENST00000478652 GPRC5DQ9NZD1 345 aa28.33■■■□□ 2.13
MCF2L2-210ENST00000478652 YDJCA8MPS7 323 aa28.32■■■□□ 2.12
MCF2L2-210ENST00000478652 ZBTB38Q8NAP3 1195 aaPredicted RBP28.32■■■□□ 2.12
MCF2L2-210ENST00000478652 JARID2Q92833 1246 aaPredicted RBP28.32■■■□□ 2.12
MCF2L2-210ENST00000478652 RAD17O75943 681 aa28.31■■■□□ 2.12
MCF2L2-210ENST00000478652 CCDC30Q5VVM6 783 aa28.31■■■□□ 2.12
MCF2L2-210ENST00000478652 WWC1Q8IX03 1113 aa28.31■■■□□ 2.12
MCF2L2-210ENST00000478652 POLR2AP24928 1970 aaKnown RBP28.3■■■□□ 2.12
MCF2L2-210ENST00000478652 GMPSP49915 693 aaPredicted RBP28.3■■■□□ 2.12
MCF2L2-210ENST00000478652 CCDC27Q2M243 656 aa28.3■■■□□ 2.12
MCF2L2-210ENST00000478652 CIAPIN1Q6FI81 312 aa28.3■■■□□ 2.12
MCF2L2-210ENST00000478652 METTL22Q9BUU2 404 aaPredicted RBP28.3■■■□□ 2.12
MCF2L2-210ENST00000478652 SEC31BQ9NQW1 1179 aa28.3■■■□□ 2.12
MCF2L2-210ENST00000478652 GPSM2P81274 684 aa28.29■■■□□ 2.12
MCF2L2-210ENST00000478652 USP50Q70EL3 339 aaPredicted RBP28.29■■■□□ 2.12
MCF2L2-210ENST00000478652 NSFL1CQ9UNZ2 370 aaKnown RBP28.29■■■□□ 2.12
MCF2L2-210ENST00000478652 PSME4Q14997 1843 aa28.29■■■□□ 2.12
MCF2L2-210ENST00000478652 CCDC191Q8NCU4 936 aa28.28■■■□□ 2.12
MCF2L2-210ENST00000478652 GPR101Q96P66 508 aaPredicted RBP28.28■■■□□ 2.12
MCF2L2-210ENST00000478652 MRS2Q9HD23 443 aa28.28■■■□□ 2.12
MCF2L2-210ENST00000478652 PCCAP05165 728 aaPredicted RBP28.27■■■□□ 2.12
MCF2L2-210ENST00000478652 VEGFBP49765 207 aa28.27■■■□□ 2.12
MCF2L2-210ENST00000478652 ADARB2Q9NS39 739 aaKnown RBP28.27■■■□□ 2.12
MCF2L2-210ENST00000478652 POLLQ9UGP5 575 aa28.27■■■□□ 2.12
MCF2L2-210ENST00000478652 MAP3K2Q9Y2U5 619 aa28.27■■■□□ 2.12
MCF2L2-210ENST00000478652 SHTN1A0MZ66 631 aa28.26■■■□□ 2.11
MCF2L2-210ENST00000478652 TRAF5O00463 557 aa28.26■■■□□ 2.11
MCF2L2-210ENST00000478652 ZEB1P37275 1124 aaPredicted RBP28.26■■■□□ 2.11
MCF2L2-210ENST00000478652 RPS8P62241 208 aaKnown RBP28.26■■■□□ 2.11
MCF2L2-210ENST00000478652 CWC25Q9NXE8 425 aaPredicted RBP28.26■■■□□ 2.11
MCF2L2-210ENST00000478652 RIMBP2O15034 1052 aa28.25■■■□□ 2.11
MCF2L2-210ENST00000478652 DDX58O95786 925 aaKnown RBP28.25■■■□□ 2.11
MCF2L2-210ENST00000478652 WASHC4Q2M389 1173 aa28.25■■■□□ 2.11
MCF2L2-210ENST00000478652 CCDC85AQ96PX6 553 aaPredicted RBP28.25■■■□□ 2.11
MCF2L2-210ENST00000478652 DBNDD1Q9H9R9 158 aa28.25■■■□□ 2.11
MCF2L2-210ENST00000478652 IGKV5-2P06315 115 aa28.24■■■□□ 2.11
MCF2L2-210ENST00000478652 G2E3Q7L622 706 aa28.24■■■□□ 2.11
MCF2L2-210ENST00000478652 BCL2L13Q9BXK5 485 aa28.24■■■□□ 2.11
MCF2L2-210ENST00000478652 THSD7BQ9C0I4 1608 aa28.24■■■□□ 2.11
MCF2L2-210ENST00000478652 CDHR2Q9BYE9 1310 aa28.23■■■□□ 2.11
MCF2L2-210ENST00000478652 PI4KAP2A4QPH2 592 aa28.23■■■□□ 2.11
MCF2L2-210ENST00000478652 ZNF316A6NFI3 1004 aaPredicted RBP28.23■■■□□ 2.11
MCF2L2-210ENST00000478652 RASSF10A6NK89 507 aa28.23■■■□□ 2.11
MCF2L2-210ENST00000478652 C6orf229H3BNL8 230 aa28.23■■■□□ 2.11
MCF2L2-210ENST00000478652 TNIP1Q15025 636 aa28.23■■■□□ 2.11
MCF2L2-210ENST00000478652 TWISTNBQ3B726 338 aaPredicted RBP28.23■■■□□ 2.11
MCF2L2-210ENST00000478652 PI4KAP1Q8N8J0 262 aa28.23■■■□□ 2.11
MCF2L2-210ENST00000478652 TRPM4Q8TD43 1214 aa28.23■■■□□ 2.11
MCF2L2-210ENST00000478652 PDE8AO60658 829 aa28.22■■■□□ 2.11
MCF2L2-210ENST00000478652 HIRAP54198 1017 aaPredicted RBP28.22■■■□□ 2.11
MCF2L2-210ENST00000478652 KSR2Q6VAB6 950 aa28.22■■■□□ 2.11
MCF2L2-210ENST00000478652 TBC1D16Q8TBP0 767 aa28.22■■■□□ 2.11
MCF2L2-210ENST00000478652 ZBTB12Q9Y330 459 aaPredicted RBP28.22■■■□□ 2.11
MCF2L2-210ENST00000478652 IL16Q14005 1332 aa28.21■■■□□ 2.11
MCF2L2-210ENST00000478652 KCNQ5Q9NR82 932 aa28.21■■■□□ 2.11
MCF2L2-210ENST00000478652 ABT1Q9ULW3 272 aaKnown RBP28.21■■■□□ 2.11
MCF2L2-210ENST00000478652 PSMD14O00487 310 aa28.2■■■□□ 2.1
MCF2L2-210ENST00000478652 ANP32CO43423 234 aa28.2■■■□□ 2.1
MCF2L2-210ENST00000478652 DOK7Q18PE1 504 aa28.2■■■□□ 2.1
MCF2L2-210ENST00000478652 DEFB115Q30KQ5 88 aa28.2■■■□□ 2.1
MCF2L2-210ENST00000478652 CCDC152Q4G0S7 254 aa28.2■■■□□ 2.1
MCF2L2-210ENST00000478652 STK31Q9BXU1 1019 aa28.2■■■□□ 2.1
MCF2L2-210ENST00000478652 CHMP4AQ9BY43 222 aa28.2■■■□□ 2.1
MCF2L2-210ENST00000478652 SALL2Q9Y467 1007 aaPredicted RBP28.2■■■□□ 2.1
MCF2L2-210ENST00000478652 RTL9Q8NET4 1388 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms