RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 GRAPQ13588 217 aa21.78■■□□□ 1.08
TRIM13-208ENST00000478111 DPP8Q6V1X1 898 aaPredicted RBP21.78■■□□□ 1.08
TRIM13-208ENST00000478111 USP50Q70EL3 339 aaPredicted RBP21.78■■□□□ 1.08
TRIM13-208ENST00000478111 DDX46Q7L014 1031 aaKnown RBP21.78■■□□□ 1.08
TRIM13-208ENST00000478111 MPNDQ8N594 471 aa21.78■■□□□ 1.08
TRIM13-208ENST00000478111 SUPT20HQ8NEM7 779 aa21.78■■□□□ 1.08
TRIM13-208ENST00000478111 GRAPLQ8TC17 118 aaPredicted RBP21.78■■□□□ 1.08
TRIM13-208ENST00000478111 DBF4Q9UBU7 674 aaPredicted RBP21.78■■□□□ 1.08
TRIM13-208ENST00000478111 ZNRF3Q9ULT6 936 aa21.78■■□□□ 1.08
TRIM13-208ENST00000478111 DUOX1Q9NRD9 1551 aa21.78■■□□□ 1.08
TRIM13-208ENST00000478111 COL4A1P02462 1669 aa21.77■■□□□ 1.08
TRIM13-208ENST00000478111 KIAA2012Q0VF49 1180 aa21.77■■□□□ 1.08
TRIM13-208ENST00000478111 DUSP27Q5VZP5 1158 aa21.77■■□□□ 1.08
TRIM13-208ENST00000478111 MBIPQ9NS73 344 aa21.77■■□□□ 1.08
TRIM13-208ENST00000478111 GPRC5DQ9NZD1 345 aa21.76■■□□□ 1.07
TRIM13-208ENST00000478111 ATP5J2-PTCD1G3V325 749 aa21.75■■□□□ 1.07
TRIM13-208ENST00000478111 CAPN15O75808 1086 aa21.75■■□□□ 1.07
TRIM13-208ENST00000478111 DEFB115Q30KQ5 88 aa21.75■■□□□ 1.07
TRIM13-208ENST00000478111 FAM89AQ96GI7 184 aa21.75■■□□□ 1.07
TRIM13-208ENST00000478111 HYPKQ9NX55 129 aa21.75■■□□□ 1.07
TRIM13-208ENST00000478111 SF3B3Q15393 1217 aaKnown RBP21.74■■□□□ 1.07
TRIM13-208ENST00000478111 ADARB2Q9NS39 739 aaKnown RBP21.74■■□□□ 1.07
TRIM13-208ENST00000478111 WBP1LQ9NX94 342 aa21.74■■□□□ 1.07
TRIM13-208ENST00000478111 APAF1O14727 1248 aa21.73■■□□□ 1.07
TRIM13-208ENST00000478111 GMPSP49915 693 aaPredicted RBP21.73■■□□□ 1.07
TRIM13-208ENST00000478111 TRIM28Q13263 835 aaKnown RBP21.73■■□□□ 1.07
TRIM13-208ENST00000478111 TMC4Q7Z404 712 aa21.73■■□□□ 1.07
TRIM13-208ENST00000478111 YDJCA8MPS7 323 aa21.72■■□□□ 1.07
TRIM13-208ENST00000478111 TRAF5O00463 557 aa21.72■■□□□ 1.07
TRIM13-208ENST00000478111 CST9Q5W186 159 aa21.72■■□□□ 1.07
TRIM13-208ENST00000478111 CIAPIN1Q6FI81 312 aa21.72■■□□□ 1.07
TRIM13-208ENST00000478111 CELF1Q92879 486 aaKnown RBP21.72■■□□□ 1.07
TRIM13-208ENST00000478111 RAD17O75943 681 aa21.71■■□□□ 1.07
TRIM13-208ENST00000478111 PGAP2Q9UHJ9 254 aa21.71■■□□□ 1.07
TRIM13-208ENST00000478111 ABT1Q9ULW3 272 aaKnown RBP21.71■■□□□ 1.07
TRIM13-208ENST00000478111 WDR33Q9C0J8 1336 aaKnown RBP21.71■■□□□ 1.07
TRIM13-208ENST00000478111 PHAXQ9H814 394 aaKnown RBP21.7■■□□□ 1.06
TRIM13-208ENST00000478111 PRDM10Q9NQV6 1147 aa21.7■■□□□ 1.06
TRIM13-208ENST00000478111 IFT57Q9NWB7 429 aa21.7■■□□□ 1.06
TRIM13-208ENST00000478111 THSD7BQ9C0I4 1608 aa21.69■■□□□ 1.06
TRIM13-208ENST00000478111 CTCFP49711 727 aaPredicted RBP21.69■■□□□ 1.06
TRIM13-208ENST00000478111 HIRAP54198 1017 aaPredicted RBP21.69■■□□□ 1.06
TRIM13-208ENST00000478111 RTL5Q5HYW3 569 aaPredicted RBP21.69■■□□□ 1.06
TRIM13-208ENST00000478111 CDHR2Q9BYE9 1310 aa21.69■■□□□ 1.06
TRIM13-208ENST00000478111 ELL2O00472 640 aaPredicted RBP21.68■■□□□ 1.06
TRIM13-208ENST00000478111 IRS4O14654 1257 aaPredicted RBP21.68■■□□□ 1.06
TRIM13-208ENST00000478111 GNAI1P63096 354 aa21.68■■□□□ 1.06
TRIM13-208ENST00000478111 TNIP1Q15025 636 aa21.68■■□□□ 1.06
TRIM13-208ENST00000478111 POLR2AP24928 1970 aaKnown RBP21.67■■□□□ 1.06
TRIM13-208ENST00000478111 SHTN1A0MZ66 631 aa21.67■■□□□ 1.06
TRIM13-208ENST00000478111 C8orf58Q8NAV2 365 aa21.67■■□□□ 1.06
TRIM13-208ENST00000478111 AIDAQ96BJ3 306 aa21.67■■□□□ 1.06
TRIM13-208ENST00000478111 POLLQ9UGP5 575 aa21.67■■□□□ 1.06
TRIM13-208ENST00000478111 NSFL1CQ9UNZ2 370 aaKnown RBP21.67■■□□□ 1.06
TRIM13-208ENST00000478111 GPSM2P81274 684 aa21.66■■□□□ 1.06
TRIM13-208ENST00000478111 WASHC4Q2M389 1173 aa21.66■■□□□ 1.06
TRIM13-208ENST00000478111 RIC3Q7Z5B4 369 aa21.66■■□□□ 1.06
TRIM13-208ENST00000478111 TRPM4Q8TD43 1214 aa21.66■■□□□ 1.06
TRIM13-208ENST00000478111 BCL2L13Q9BXK5 485 aa21.66■■□□□ 1.06
TRIM13-208ENST00000478111 GLIS2Q9BZE0 524 aaPredicted RBP21.66■■□□□ 1.06
TRIM13-208ENST00000478111 CNOT7Q9UIV1 285 aaKnown RBP21.66■■□□□ 1.06
TRIM13-208ENST00000478111 TLL2Q9Y6L7 1015 aa21.66■■□□□ 1.06
TRIM13-208ENST00000478111 LBX1P52954 281 aa21.65■■□□□ 1.06
TRIM13-208ENST00000478111 ZBTB38Q8NAP3 1195 aaPredicted RBP21.65■■□□□ 1.06
TRIM13-208ENST00000478111 CAPNS2Q96L46 248 aa21.65■■□□□ 1.06
TRIM13-208ENST00000478111 SCN9AQ15858 1988 aa21.65■■□□□ 1.06
TRIM13-208ENST00000478111 HSPA8P11142 646 aaKnown RBP21.64■■□□□ 1.05
TRIM13-208ENST00000478111 RPS8P62241 208 aaKnown RBP21.64■■□□□ 1.05
TRIM13-208ENST00000478111 GOLGA2Q08379 1002 aa21.64■■□□□ 1.05
TRIM13-208ENST00000478111 CYP4F22Q6NT55 531 aa21.64■■□□□ 1.05
TRIM13-208ENST00000478111 ZC3H15Q8WU90 426 aaKnown RBP21.64■■□□□ 1.05
TRIM13-208ENST00000478111 DBNDD1Q9H9R9 158 aa21.64■■□□□ 1.05
TRIM13-208ENST00000478111 ZBTB12Q9Y330 459 aaPredicted RBP21.64■■□□□ 1.05
TRIM13-208ENST00000478111 PSMD14O00487 310 aa21.63■■□□□ 1.05
TRIM13-208ENST00000478111 RIMBP2O15034 1052 aa21.63■■□□□ 1.05
TRIM13-208ENST00000478111 MAP2K1Q02750 393 aaPredicted RBP21.63■■□□□ 1.05
TRIM13-208ENST00000478111 CALD1Q05682 793 aaKnown RBP21.63■■□□□ 1.05
TRIM13-208ENST00000478111 MYD88Q99836 296 aa21.63■■□□□ 1.05
TRIM13-208ENST00000478111 SEC31BQ9NQW1 1179 aa21.63■■□□□ 1.05
TRIM13-208ENST00000478111 KCNQ5Q9NR82 932 aa21.63■■□□□ 1.05
TRIM13-208ENST00000478111 C6orf229H3BNL8 230 aa21.62■■□□□ 1.05
TRIM13-208ENST00000478111 TBC1D16Q8TBP0 767 aa21.62■■□□□ 1.05
TRIM13-208ENST00000478111 DPF2Q92785 391 aa21.62■■□□□ 1.05
TRIM13-208ENST00000478111 GPR101Q96P66 508 aaPredicted RBP21.62■■□□□ 1.05
TRIM13-208ENST00000478111 CELF2O95319 508 aaKnown RBP21.61■■□□□ 1.05
TRIM13-208ENST00000478111 PCCAP05165 728 aaPredicted RBP21.61■■□□□ 1.05
TRIM13-208ENST00000478111 ECE1P42892 770 aa21.61■■□□□ 1.05
TRIM13-208ENST00000478111 CCDC184Q52MB2 194 aa21.61■■□□□ 1.05
TRIM13-208ENST00000478111 SAPCD2Q86UD0 394 aa21.61■■□□□ 1.05
TRIM13-208ENST00000478111 MICALL2Q8IY33 904 aa21.61■■□□□ 1.05
TRIM13-208ENST00000478111 TSPYL6Q8N831 410 aa21.61■■□□□ 1.05
TRIM13-208ENST00000478111 CCDC191Q8NCU4 936 aa21.61■■□□□ 1.05
TRIM13-208ENST00000478111 PODXL2Q9NZ53 605 aa21.61■■□□□ 1.05
TRIM13-208ENST00000478111 RTL9Q8NET4 1388 aa21.61■■□□□ 1.05
TRIM13-208ENST00000478111 H7C1D1 291 aa21.6■■□□□ 1.05
TRIM13-208ENST00000478111 DOK7Q18PE1 504 aa21.6■■□□□ 1.05
TRIM13-208ENST00000478111 JARID2Q92833 1246 aaPredicted RBP21.6■■□□□ 1.05
TRIM13-208ENST00000478111 METTL22Q9BUU2 404 aaPredicted RBP21.6■■□□□ 1.05
TRIM13-208ENST00000478111 ECE2O60344 883 aa21.59■■□□□ 1.05
TRIM13-208ENST00000478111 EGFRP00533 1210 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms