RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 SPEF2Q9C093 1822 aa15.71■□□□□ 0.11
PRKD3-209ENST00000477132 NEURL1BA8MQ27 555 aa15.71■□□□□ 0.11
PRKD3-209ENST00000477132 KIF3CO14782 793 aa15.71■□□□□ 0.11
PRKD3-209ENST00000477132 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
PRKD3-209ENST00000477132 FKBP4Q02790 459 aaKnown RBP eCLIP15.71■□□□□ 0.11
PRKD3-209ENST00000477132 FKBP5Q13451 457 aaPredicted RBP15.71■□□□□ 0.11
PRKD3-209ENST00000477132 NMRK2Q9NPI5 230 aa15.71■□□□□ 0.11
PRKD3-209ENST00000477132 DUOX1Q9NRD9 1551 aa15.7■□□□□ 0.1
PRKD3-209ENST00000477132 ZC3H4Q9UPT8 1303 aaKnown RBP15.7■□□□□ 0.1
PRKD3-209ENST00000477132 SF3B3Q15393 1217 aaKnown RBP15.7■□□□□ 0.1
PRKD3-209ENST00000477132 TRMT2AQ8IZ69 625 aaKnown RBP15.7■□□□□ 0.1
PRKD3-209ENST00000477132 ZNF277Q9NRM2 450 aaPredicted RBP15.7■□□□□ 0.1
PRKD3-209ENST00000477132 LTBP1Q14766 1721 aa15.7■□□□□ 0.1
PRKD3-209ENST00000477132 WDR90Q96KV7 1748 aa15.69■□□□□ 0.1
PRKD3-209ENST00000477132 F6X3S4 739 aa15.69■□□□□ 0.1
PRKD3-209ENST00000477132 GRAPQ13588 217 aa15.69■□□□□ 0.1
PRKD3-209ENST00000477132 RTKN2Q8IZC4 609 aa15.69■□□□□ 0.1
PRKD3-209ENST00000477132 GRAPLQ8TC17 118 aaPredicted RBP15.69■□□□□ 0.1
PRKD3-209ENST00000477132 DNAAF4Q8WXU2 420 aa15.69■□□□□ 0.1
PRKD3-209ENST00000477132 CELF1Q92879 486 aaKnown RBP15.69■□□□□ 0.1
PRKD3-209ENST00000477132 ATP6V0A2Q9Y487 856 aa15.69■□□□□ 0.1
PRKD3-209ENST00000477132 NEXNQ0ZGT2 675 aa15.68■□□□□ 0.1
PRKD3-209ENST00000477132 DDX46Q7L014 1031 aaKnown RBP15.68■□□□□ 0.1
PRKD3-209ENST00000477132 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
PRKD3-209ENST00000477132 C1QTNF8P60827 252 aa15.67■□□□□ 0.1
PRKD3-209ENST00000477132 CC2D2BQ6DHV5 1058 aa15.67■□□□□ 0.1
PRKD3-209ENST00000477132 PSMD1Q99460 953 aa15.67■□□□□ 0.1
PRKD3-209ENST00000477132 GLTPD2A6NH11 291 aa15.66■□□□□ 0.1
PRKD3-209ENST00000477132 PDE8AO60658 829 aa15.66■□□□□ 0.1
PRKD3-209ENST00000477132 BBOX1O75936 387 aa15.66■□□□□ 0.1
PRKD3-209ENST00000477132 IARSP41252 1262 aaKnown RBP15.66■□□□□ 0.1
PRKD3-209ENST00000477132 GCKRQ14397 625 aa15.66■□□□□ 0.1
PRKD3-209ENST00000477132 MRPL50Q8N5N7 158 aaKnown RBP15.66■□□□□ 0.1
PRKD3-209ENST00000477132 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
PRKD3-209ENST00000477132 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
PRKD3-209ENST00000477132 KDM2BQ8NHM5 1336 aa15.66■□□□□ 0.1
PRKD3-209ENST00000477132 H7C1W4 665 aa15.65■□□□□ 0.1
PRKD3-209ENST00000477132 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
PRKD3-209ENST00000477132 CASP7P55210 303 aa15.65■□□□□ 0.1
PRKD3-209ENST00000477132 BEND3Q5T5X7 828 aa15.65■□□□□ 0.1
PRKD3-209ENST00000477132 UBE3BQ7Z3V4 1068 aa15.65■□□□□ 0.1
PRKD3-209ENST00000477132 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
PRKD3-209ENST00000477132 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
PRKD3-209ENST00000477132 SSH1Q8WYL5 1049 aa15.65■□□□□ 0.1
PRKD3-209ENST00000477132 BCL2L13Q9BXK5 485 aa15.65■□□□□ 0.1
PRKD3-209ENST00000477132 ZNF541Q9H0D2 1346 aa15.65■□□□□ 0.1
PRKD3-209ENST00000477132 POTECB2RU33 542 aa15.64■□□□□ 0.09
PRKD3-209ENST00000477132 RRAGCQ9HB90 399 aa15.64■□□□□ 0.09
PRKD3-209ENST00000477132 DDNO94850 711 aaPredicted RBP15.63■□□□□ 0.09
PRKD3-209ENST00000477132 CTSWP56202 376 aa15.63■□□□□ 0.09
PRKD3-209ENST00000477132 A0A1B0GUL6 1792 aa15.62■□□□□ 0.09
PRKD3-209ENST00000477132 CCDC152Q4G0S7 254 aa15.62■□□□□ 0.09
PRKD3-209ENST00000477132 GRIPAP1Q4V328 841 aa15.62■□□□□ 0.09
PRKD3-209ENST00000477132 TTLL11Q8NHH1 800 aa15.62■□□□□ 0.09
PRKD3-209ENST00000477132 RTFDC1Q9BY42 306 aaPredicted RBP15.62■□□□□ 0.09
PRKD3-209ENST00000477132 SCN4AP35499 1836 aa15.61■□□□□ 0.09
PRKD3-209ENST00000477132 FZD9O00144 591 aa15.61■□□□□ 0.09
PRKD3-209ENST00000477132 HSP90B1P14625 803 aaKnown RBP15.61■□□□□ 0.09
PRKD3-209ENST00000477132 RPS8P62241 208 aaKnown RBP15.61■□□□□ 0.09
PRKD3-209ENST00000477132 HNRNPUQ00839 825 aaKnown RBP eCLIP15.61■□□□□ 0.09
PRKD3-209ENST00000477132 AOC3Q16853 763 aa15.61■□□□□ 0.09
PRKD3-209ENST00000477132 DPP8Q6V1X1 898 aaPredicted RBP15.61■□□□□ 0.09
PRKD3-209ENST00000477132 TMC4Q7Z404 712 aa15.61■□□□□ 0.09
PRKD3-209ENST00000477132 MPNDQ8N594 471 aa15.61■□□□□ 0.09
PRKD3-209ENST00000477132 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
PRKD3-209ENST00000477132 GREM2Q9H772 168 aa15.61■□□□□ 0.09
PRKD3-209ENST00000477132 PPIP5K2O43314 1243 aa15.6■□□□□ 0.09
PRKD3-209ENST00000477132 GPSM2P81274 684 aa15.6■□□□□ 0.09
PRKD3-209ENST00000477132 ALDH1L2Q3SY69 923 aa15.6■□□□□ 0.09
PRKD3-209ENST00000477132 DPY19L2Q6NUT2 758 aa15.6■□□□□ 0.09
PRKD3-209ENST00000477132 SLC4A10Q6U841 1118 aa15.6■□□□□ 0.09
PRKD3-209ENST00000477132 LARGE2Q8N3Y3 721 aa15.6■□□□□ 0.09
PRKD3-209ENST00000477132 RTL9Q8NET4 1388 aa15.6■□□□□ 0.09
PRKD3-209ENST00000477132 TOMM70O94826 608 aa15.59■□□□□ 0.09
PRKD3-209ENST00000477132 TMX4Q9H1E5 349 aaPredicted RBP15.59■□□□□ 0.09
PRKD3-209ENST00000477132 SMC4Q9NTJ3 1288 aa15.59■□□□□ 0.09
PRKD3-209ENST00000477132 VEGFAP15692 232 aaPredicted RBP15.58■□□□□ 0.08
PRKD3-209ENST00000477132 FAM161AQ3B820 660 aa15.58■□□□□ 0.08
PRKD3-209ENST00000477132 EPHA10Q5JZY3 1008 aa15.58■□□□□ 0.08
PRKD3-209ENST00000477132 GPR101Q96P66 508 aaPredicted RBP15.58■□□□□ 0.08
PRKD3-209ENST00000477132 POLLQ9UGP5 575 aa15.58■□□□□ 0.08
PRKD3-209ENST00000477132 NSFL1CQ9UNZ2 370 aaKnown RBP15.58■□□□□ 0.08
PRKD3-209ENST00000477132 PTPRCP08575 1304 aa15.58■□□□□ 0.08
PRKD3-209ENST00000477132 ADAMTSL1Q8N6G6 1762 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 SCN9AQ15858 1988 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 GRM8O00222 908 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 ALDH1L1O75891 902 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 CSF1RP07333 972 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 CT47B1P0C2W7 299 aaPredicted RBP15.57■□□□□ 0.08
PRKD3-209ENST00000477132 FOXO4P98177 505 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 KIAA2012Q0VF49 1180 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 ANKRD18AQ8IVF6 992 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 NIM1KQ8IY84 436 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 SUPT20HQ8NEM7 779 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 JDP2Q8WYK2 163 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 L3MBTL3Q96JM7 780 aaPredicted RBP15.57■□□□□ 0.08
PRKD3-209ENST00000477132 SRCIN1Q9C0H9 1055 aa15.57■□□□□ 0.08
PRKD3-209ENST00000477132 TBC1D16Q8TBP0 767 aa15.56■□□□□ 0.08
PRKD3-209ENST00000477132 RBM46Q8TBY0 533 aaKnown RBP15.56■□□□□ 0.08
PRKD3-209ENST00000477132 VPS33BQ9H267 617 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms