RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 JDP2Q8WYK2 163 aa14.38□□□□□ -0.11
PTPRN-213ENST00000476930 JARID2Q92833 1246 aaPredicted RBP14.38□□□□□ -0.11
PTPRN-213ENST00000476930 L3MBTL3Q96JM7 780 aaPredicted RBP14.38□□□□□ -0.11
PTPRN-213ENST00000476930 MAP3K2Q9Y2U5 619 aa14.38□□□□□ -0.11
PTPRN-213ENST00000476930 AOC3Q16853 763 aa14.37□□□□□ -0.11
PTPRN-213ENST00000476930 WDR63Q8IWG1 891 aa14.37□□□□□ -0.11
PTPRN-213ENST00000476930 ZBTB38Q8NAP3 1195 aaPredicted RBP14.37□□□□□ -0.11
PTPRN-213ENST00000476930 CELF1Q92879 486 aaKnown RBP14.37□□□□□ -0.11
PTPRN-213ENST00000476930 METTL22Q9BUU2 404 aaPredicted RBP14.37□□□□□ -0.11
PTPRN-213ENST00000476930 CHMP4AQ9BY43 222 aa14.37□□□□□ -0.11
PTPRN-213ENST00000476930 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
PTPRN-213ENST00000476930 TAF1DQ9H5J8 278 aaPredicted RBP14.37□□□□□ -0.11
PTPRN-213ENST00000476930 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
PTPRN-213ENST00000476930 DUOX1Q9NRD9 1551 aa14.37□□□□□ -0.11
PTPRN-213ENST00000476930 ADAMTSL1Q8N6G6 1762 aa14.37□□□□□ -0.11
PTPRN-213ENST00000476930 PI4KAP2A4QPH2 592 aa14.36□□□□□ -0.11
PTPRN-213ENST00000476930 PPIP5K2O43314 1243 aa14.36□□□□□ -0.11
PTPRN-213ENST00000476930 DDX58O95786 925 aaKnown RBP14.36□□□□□ -0.11
PTPRN-213ENST00000476930 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
PTPRN-213ENST00000476930 DPP8Q6V1X1 898 aaPredicted RBP14.36□□□□□ -0.11
PTPRN-213ENST00000476930 KSR2Q6VAB6 950 aa14.36□□□□□ -0.11
PTPRN-213ENST00000476930 MPNDQ8N594 471 aa14.36□□□□□ -0.11
PTPRN-213ENST00000476930 PI4KAP1Q8N8J0 262 aa14.36□□□□□ -0.11
PTPRN-213ENST00000476930 CCDC191Q8NCU4 936 aa14.36□□□□□ -0.11
PTPRN-213ENST00000476930 STK31Q9BXU1 1019 aa14.36□□□□□ -0.11
PTPRN-213ENST00000476930 RTFDC1Q9BY42 306 aaPredicted RBP14.36□□□□□ -0.11
PTPRN-213ENST00000476930 GJA3Q9Y6H8 435 aa14.36□□□□□ -0.11
PTPRN-213ENST00000476930 IQCA1LA6NCM1 817 aa14.35□□□□□ -0.11
PTPRN-213ENST00000476930 EIF6P56537 245 aaKnown RBP14.35□□□□□ -0.11
PTPRN-213ENST00000476930 EXOSC9Q06265 439 aaKnown RBP14.35□□□□□ -0.11
PTPRN-213ENST00000476930 GPC2Q8N158 579 aa14.35□□□□□ -0.11
PTPRN-213ENST00000476930 CWC25Q9NXE8 425 aaPredicted RBP14.35□□□□□ -0.11
PTPRN-213ENST00000476930 VAMP4O75379 141 aa14.34□□□□□ -0.11
PTPRN-213ENST00000476930 PCCAP05165 728 aaPredicted RBP14.34□□□□□ -0.11
PTPRN-213ENST00000476930 IGKV5-2P06315 115 aa14.34□□□□□ -0.11
PTPRN-213ENST00000476930 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
PTPRN-213ENST00000476930 NIM1KQ8IY84 436 aa14.34□□□□□ -0.11
PTPRN-213ENST00000476930 SEC31BQ9NQW1 1179 aa14.34□□□□□ -0.11
PTPRN-213ENST00000476930 HACL1Q9UJ83 578 aa14.34□□□□□ -0.11
PTPRN-213ENST00000476930 POLR2AP24928 1970 aaKnown RBP14.33□□□□□ -0.12
PTPRN-213ENST00000476930 EPHX2P34913 555 aa14.33□□□□□ -0.12
PTPRN-213ENST00000476930 EAPPQ56P03 285 aaPredicted RBP14.33□□□□□ -0.12
PTPRN-213ENST00000476930 SUPT20HQ8NEM7 779 aa14.33□□□□□ -0.12
PTPRN-213ENST00000476930 CCDC85AQ96PX6 553 aaPredicted RBP14.33□□□□□ -0.12
PTPRN-213ENST00000476930 VPS33BQ9H267 617 aa14.33□□□□□ -0.12
PTPRN-213ENST00000476930 SCN9AQ15858 1988 aa14.33□□□□□ -0.12
PTPRN-213ENST00000476930 CWF19L2Q2TBE0 894 aaKnown RBP14.32□□□□□ -0.12
PTPRN-213ENST00000476930 TMC4Q7Z404 712 aa14.32□□□□□ -0.12
PTPRN-213ENST00000476930 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
PTPRN-213ENST00000476930 PDE8AO60658 829 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 EPS15P42566 896 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 SCNN1DP51172 638 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 RPS8P62241 208 aaKnown RBP14.31□□□□□ -0.12
PTPRN-213ENST00000476930 GPSM2P81274 684 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 CXCL9Q07325 125 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 KIAA2012Q0VF49 1180 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 FLIIQ13045 1269 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 KLRG1Q96E93 195 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 NSFL1CQ9UNZ2 370 aaKnown RBP14.31□□□□□ -0.12
PTPRN-213ENST00000476930 TRPM7Q96QT4 1865 aa14.31□□□□□ -0.12
PTPRN-213ENST00000476930 NEURL1BA8MQ27 555 aa14.3□□□□□ -0.12
PTPRN-213ENST00000476930 NEXNQ0ZGT2 675 aa14.3□□□□□ -0.12
PTPRN-213ENST00000476930 POLLQ9UGP5 575 aa14.3□□□□□ -0.12
PTPRN-213ENST00000476930 CLEC11AQ9Y240 323 aa14.3□□□□□ -0.12
PTPRN-213ENST00000476930 CDHR2Q9BYE9 1310 aa14.3□□□□□ -0.12
PTPRN-213ENST00000476930 YDJCA8MPS7 323 aa14.29□□□□□ -0.12
PTPRN-213ENST00000476930 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
PTPRN-213ENST00000476930 ITGBL1O95965 494 aaPredicted RBP14.29□□□□□ -0.12
PTPRN-213ENST00000476930 HSP90B1P14625 803 aaKnown RBP14.29□□□□□ -0.12
PTPRN-213ENST00000476930 FKBP5Q13451 457 aaPredicted RBP14.29□□□□□ -0.12
PTPRN-213ENST00000476930 CCDC152Q4G0S7 254 aa14.29□□□□□ -0.12
PTPRN-213ENST00000476930 GPR101Q96P66 508 aaPredicted RBP14.29□□□□□ -0.12
PTPRN-213ENST00000476930 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
PTPRN-213ENST00000476930 PSME4Q14997 1843 aa14.29□□□□□ -0.12
PTPRN-213ENST00000476930 C6orf229H3BNL8 230 aa14.28□□□□□ -0.12
PTPRN-213ENST00000476930 H7C1W4 665 aa14.28□□□□□ -0.12
PTPRN-213ENST00000476930 RAD17O75943 681 aa14.28□□□□□ -0.12
PTPRN-213ENST00000476930 LMOD1P29536 600 aaPredicted RBP14.28□□□□□ -0.12
PTPRN-213ENST00000476930 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
PTPRN-213ENST00000476930 PNMA8AQ86V59 439 aaPredicted RBP14.28□□□□□ -0.12
PTPRN-213ENST00000476930 DNAAF4Q8WXU2 420 aa14.28□□□□□ -0.12
PTPRN-213ENST00000476930 ZNF521Q96K83 1311 aa14.28□□□□□ -0.12
PTPRN-213ENST00000476930 MYH16Q9H6N6 1097 aa14.28□□□□□ -0.12
PTPRN-213ENST00000476930 GMPSP49915 693 aaPredicted RBP14.27□□□□□ -0.13
PTPRN-213ENST00000476930 CTSWP56202 376 aa14.27□□□□□ -0.13
PTPRN-213ENST00000476930 GCKRQ14397 625 aa14.27□□□□□ -0.13
PTPRN-213ENST00000476930 WASHC4Q2M389 1173 aa14.27□□□□□ -0.13
PTPRN-213ENST00000476930 CIAPIN1Q6FI81 312 aa14.27□□□□□ -0.13
PTPRN-213ENST00000476930 UBE3BQ7Z3V4 1068 aa14.27□□□□□ -0.13
PTPRN-213ENST00000476930 TTLL11Q8NHH1 800 aa14.27□□□□□ -0.13
PTPRN-213ENST00000476930 TBC1D16Q8TBP0 767 aa14.27□□□□□ -0.13
PTPRN-213ENST00000476930 DBNDD1Q9H9R9 158 aa14.27□□□□□ -0.13
PTPRN-213ENST00000476930 GPRC5DQ9NZD1 345 aa14.27□□□□□ -0.13
PTPRN-213ENST00000476930 F6X3S4 739 aa14.26□□□□□ -0.13
PTPRN-213ENST00000476930 DOK7Q18PE1 504 aa14.26□□□□□ -0.13
PTPRN-213ENST00000476930 CNTROBQ8N137 903 aa14.26□□□□□ -0.13
PTPRN-213ENST00000476930 JMYQ8N9B5 988 aa14.26□□□□□ -0.13
PTPRN-213ENST00000476930 GREM2Q9H772 168 aa14.26□□□□□ -0.13
PTPRN-213ENST00000476930 KCNQ5Q9NR82 932 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms