RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 PCNTO95613 3336 aa15.46■□□□□ 0.07
SMPD4-217ENST00000473720 BBOX1O75936 387 aa15.46■□□□□ 0.07
SMPD4-217ENST00000473720 EPS15P42566 896 aa15.46■□□□□ 0.07
SMPD4-217ENST00000473720 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
SMPD4-217ENST00000473720 GRAPQ13588 217 aa15.46■□□□□ 0.07
SMPD4-217ENST00000473720 PNMA8AQ86V59 439 aaPredicted RBP15.46■□□□□ 0.07
SMPD4-217ENST00000473720 SP8Q8IXZ3 490 aa15.46■□□□□ 0.07
SMPD4-217ENST00000473720 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
SMPD4-217ENST00000473720 SUPT20HQ8NEM7 779 aa15.46■□□□□ 0.07
SMPD4-217ENST00000473720 GRAPLQ8TC17 118 aaPredicted RBP15.46■□□□□ 0.07
SMPD4-217ENST00000473720 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
SMPD4-217ENST00000473720 HSPA1AP0DMV8 641 aaKnown RBP15.45■□□□□ 0.06
SMPD4-217ENST00000473720 HSPA1BP0DMV9 641 aaKnown RBP15.45■□□□□ 0.06
SMPD4-217ENST00000473720 CNTROBQ8N137 903 aa15.45■□□□□ 0.06
SMPD4-217ENST00000473720 MYD88Q99836 296 aa15.45■□□□□ 0.06
SMPD4-217ENST00000473720 PASKQ96RG2 1323 aa15.44■□□□□ 0.06
SMPD4-217ENST00000473720 SCNN1DP51172 638 aa15.44■□□□□ 0.06
SMPD4-217ENST00000473720 JARID2Q92833 1246 aaPredicted RBP15.44■□□□□ 0.06
SMPD4-217ENST00000473720 TSR2Q969E8 191 aaKnown RBP15.44■□□□□ 0.06
SMPD4-217ENST00000473720 TMEM88BA6NKF7 163 aa15.43■□□□□ 0.06
SMPD4-217ENST00000473720 IRS4O14654 1257 aaPredicted RBP15.43■□□□□ 0.06
SMPD4-217ENST00000473720 RAD17O75943 681 aa15.43■□□□□ 0.06
SMPD4-217ENST00000473720 ITGBL1O95965 494 aaPredicted RBP15.43■□□□□ 0.06
SMPD4-217ENST00000473720 COL13A1Q5TAT6 717 aaPredicted RBP15.43■□□□□ 0.06
SMPD4-217ENST00000473720 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
SMPD4-217ENST00000473720 CELF1Q92879 486 aaKnown RBP15.43■□□□□ 0.06
SMPD4-217ENST00000473720 SALL2Q9Y467 1007 aaPredicted RBP15.43■□□□□ 0.06
SMPD4-217ENST00000473720 DUOX1Q9NRD9 1551 aa15.43■□□□□ 0.06
SMPD4-217ENST00000473720 SCN9AQ15858 1988 aa15.42■□□□□ 0.06
SMPD4-217ENST00000473720 CXCL9Q07325 125 aa15.42■□□□□ 0.06
SMPD4-217ENST00000473720 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
SMPD4-217ENST00000473720 ZNRF3Q9ULT6 936 aa15.42■□□□□ 0.06
SMPD4-217ENST00000473720 NSFL1CQ9UNZ2 370 aaKnown RBP15.42■□□□□ 0.06
SMPD4-217ENST00000473720 C6orf229H3BNL8 230 aa15.41■□□□□ 0.06
SMPD4-217ENST00000473720 RIMBP2O15034 1052 aa15.41■□□□□ 0.06
SMPD4-217ENST00000473720 FMR1Q06787 632 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMPD4-217ENST00000473720 KIAA2012Q0VF49 1180 aa15.41■□□□□ 0.06
SMPD4-217ENST00000473720 CIAPIN1Q6FI81 312 aa15.41■□□□□ 0.06
SMPD4-217ENST00000473720 CCDC85AQ96PX6 553 aaPredicted RBP15.41■□□□□ 0.06
SMPD4-217ENST00000473720 BCL2L13Q9BXK5 485 aa15.41■□□□□ 0.06
SMPD4-217ENST00000473720 RTFDC1Q9BY42 306 aaPredicted RBP15.41■□□□□ 0.06
SMPD4-217ENST00000473720 VPS33BQ9H267 617 aa15.41■□□□□ 0.06
SMPD4-217ENST00000473720 MRS2Q9HD23 443 aa15.41■□□□□ 0.06
SMPD4-217ENST00000473720 CNTNAP1P78357 1384 aa15.4■□□□□ 0.06
SMPD4-217ENST00000473720 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
SMPD4-217ENST00000473720 ZEB1P37275 1124 aaPredicted RBP15.4■□□□□ 0.06
SMPD4-217ENST00000473720 GMPSP49915 693 aaPredicted RBP15.4■□□□□ 0.06
SMPD4-217ENST00000473720 SF3B3Q15393 1217 aaKnown RBP15.4■□□□□ 0.06
SMPD4-217ENST00000473720 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
SMPD4-217ENST00000473720 GPRC5DQ9NZD1 345 aa15.4■□□□□ 0.06
SMPD4-217ENST00000473720 ABT1Q9ULW3 272 aaKnown RBP15.4■□□□□ 0.06
SMPD4-217ENST00000473720 PSME4Q14997 1843 aa15.4■□□□□ 0.06
SMPD4-217ENST00000473720 ANP32CO43423 234 aa15.39■□□□□ 0.05
SMPD4-217ENST00000473720 GPSM2P81274 684 aa15.39■□□□□ 0.05
SMPD4-217ENST00000473720 WASHC4Q2M389 1173 aa15.39■□□□□ 0.05
SMPD4-217ENST00000473720 PAXIP1Q6ZW49 1069 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-217ENST00000473720 USP50Q70EL3 339 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-217ENST00000473720 TMC4Q7Z404 712 aa15.39■□□□□ 0.05
SMPD4-217ENST00000473720 GPR101Q96P66 508 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-217ENST00000473720 DBNDD1Q9H9R9 158 aa15.39■□□□□ 0.05
SMPD4-217ENST00000473720 SEC31BQ9NQW1 1179 aa15.39■□□□□ 0.05
SMPD4-217ENST00000473720 MAP3K2Q9Y2U5 619 aa15.39■□□□□ 0.05
SMPD4-217ENST00000473720 YDJCA8MPS7 323 aa15.38■□□□□ 0.05
SMPD4-217ENST00000473720 CAPN15O75808 1086 aa15.38■□□□□ 0.05
SMPD4-217ENST00000473720 VEGFBP49765 207 aa15.38■□□□□ 0.05
SMPD4-217ENST00000473720 GRM1Q13255 1194 aa15.38■□□□□ 0.05
SMPD4-217ENST00000473720 TRIM28Q13263 835 aaKnown RBP15.38■□□□□ 0.05
SMPD4-217ENST00000473720 TNIP1Q15025 636 aa15.38■□□□□ 0.05
SMPD4-217ENST00000473720 WWC1Q8IX03 1113 aa15.38■□□□□ 0.05
SMPD4-217ENST00000473720 METTL22Q9BUU2 404 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-217ENST00000473720 STK31Q9BXU1 1019 aa15.38■□□□□ 0.05
SMPD4-217ENST00000473720 ADARB2Q9NS39 739 aaKnown RBP15.38■□□□□ 0.05
SMPD4-217ENST00000473720 CWC25Q9NXE8 425 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-217ENST00000473720 ZNF316A6NFI3 1004 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-217ENST00000473720 TRAF5O00463 557 aa15.37■□□□□ 0.05
SMPD4-217ENST00000473720 RPS8P62241 208 aaKnown RBP15.37■□□□□ 0.05
SMPD4-217ENST00000473720 DOK7Q18PE1 504 aa15.37■□□□□ 0.05
SMPD4-217ENST00000473720 DEFB115Q30KQ5 88 aa15.37■□□□□ 0.05
SMPD4-217ENST00000473720 TWISTNBQ3B726 338 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-217ENST00000473720 TNS4Q8IZW8 715 aa15.37■□□□□ 0.05
SMPD4-217ENST00000473720 CCDC191Q8NCU4 936 aa15.37■□□□□ 0.05
SMPD4-217ENST00000473720 POLLQ9UGP5 575 aa15.37■□□□□ 0.05
SMPD4-217ENST00000473720 SHTN1A0MZ66 631 aa15.36■□□□□ 0.05
SMPD4-217ENST00000473720 PI4KAP2A4QPH2 592 aa15.36■□□□□ 0.05
SMPD4-217ENST00000473720 G3V3G9 751 aa15.36■□□□□ 0.05
SMPD4-217ENST00000473720 PDE8AO60658 829 aa15.36■□□□□ 0.05
SMPD4-217ENST00000473720 PCCAP05165 728 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-217ENST00000473720 CCDC152Q4G0S7 254 aa15.36■□□□□ 0.05
SMPD4-217ENST00000473720 DCAF8Q5TAQ9 597 aa15.36■□□□□ 0.05
SMPD4-217ENST00000473720 PI4KAP1Q8N8J0 262 aa15.36■□□□□ 0.05
SMPD4-217ENST00000473720 CHMP4AQ9BY43 222 aa15.36■□□□□ 0.05
SMPD4-217ENST00000473720 ANKIB1Q9P2G1 1089 aa15.36■□□□□ 0.05
SMPD4-217ENST00000473720 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-217ENST00000473720 HSP90B1P14625 803 aaKnown RBP15.35■□□□□ 0.05
SMPD4-217ENST00000473720 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
SMPD4-217ENST00000473720 EYA3Q99504 573 aa15.35■□□□□ 0.05
SMPD4-217ENST00000473720 ZNF408Q9H9D4 720 aa15.35■□□□□ 0.05
SMPD4-217ENST00000473720 CNOT7Q9UIV1 285 aaKnown RBP15.35■□□□□ 0.05
SMPD4-217ENST00000473720 H7C1D1 291 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 PSMD14O00487 310 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms