RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 CRAMP1Q96RY5 1269 aa11.47□□□□□ -0.57
SMG5-203ENST00000473643 TAOK3Q9H2K8 898 aa11.47□□□□□ -0.57
SMG5-203ENST00000473643 NMRK2Q9NPI5 230 aa11.47□□□□□ -0.57
SMG5-203ENST00000473643 DDX19BQ9UMR2 479 aa11.47□□□□□ -0.57
SMG5-203ENST00000473643 COG6Q9Y2V7 657 aa11.47□□□□□ -0.57
SMG5-203ENST00000473643 UTYO14607 1347 aa11.46□□□□□ -0.57
SMG5-203ENST00000473643 GLTPD2A6NH11 291 aa11.46□□□□□ -0.57
SMG5-203ENST00000473643 AAMPQ13685 434 aa11.46□□□□□ -0.57
SMG5-203ENST00000473643 GCKRQ14397 625 aa11.46□□□□□ -0.57
SMG5-203ENST00000473643 CWF19L2Q2TBE0 894 aaKnown RBP11.46□□□□□ -0.57
SMG5-203ENST00000473643 CCDC93Q567U6 631 aa11.46□□□□□ -0.57
SMG5-203ENST00000473643 RTKN2Q8IZC4 609 aa11.46□□□□□ -0.57
SMG5-203ENST00000473643 USP44Q9H0E7 712 aa11.46□□□□□ -0.57
SMG5-203ENST00000473643 CHMP4BQ9H444 224 aaKnown RBP11.46□□□□□ -0.57
SMG5-203ENST00000473643 COL11A2P13942 1736 aaPredicted RBP11.46□□□□□ -0.58
SMG5-203ENST00000473643 NUP98P52948 1817 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 SLX4Q8IY92 1834 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 ATP5J2-PTCD1G3V325 749 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 H7C1W4 665 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 TOMM70O94826 608 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 ERICH6BQ5W0A0 696 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 CC2D2BQ6DHV5 1058 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 OLFM4Q6UX06 510 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 ITPRIPQ8IWB1 547 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 SYNE4Q8N205 404 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 RPGRQ92834 1020 aaKnown RBP11.45□□□□□ -0.58
SMG5-203ENST00000473643 RBM17Q96I25 401 aaKnown RBP11.45□□□□□ -0.58
SMG5-203ENST00000473643 CRBNQ96SW2 442 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 RRAGCQ9HB90 399 aa11.45□□□□□ -0.58
SMG5-203ENST00000473643 CWC25Q9NXE8 425 aaPredicted RBP11.45□□□□□ -0.58
SMG5-203ENST00000473643 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
SMG5-203ENST00000473643 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
SMG5-203ENST00000473643 HCLS1P14317 486 aaPredicted RBP11.44□□□□□ -0.58
SMG5-203ENST00000473643 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMG5-203ENST00000473643 GRIPAP1Q4V328 841 aa11.44□□□□□ -0.58
SMG5-203ENST00000473643 ZBTB40Q9NUA8 1239 aa11.44□□□□□ -0.58
SMG5-203ENST00000473643 SBF1O95248 1867 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 GRM8O00222 908 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 PCCAP05165 728 aaPredicted RBP11.43□□□□□ -0.58
SMG5-203ENST00000473643 NEFLP07196 543 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 GNAI3P08754 354 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 CASP7P55210 303 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 EXOC6Q8TAG9 804 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 PSMD1Q99460 953 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 HDAC5Q9UQL6 1122 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 SNED1Q8TER0 1413 aa11.43□□□□□ -0.58
SMG5-203ENST00000473643 POTECB2RU33 542 aa11.42□□□□□ -0.58
SMG5-203ENST00000473643 BBOX1O75936 387 aa11.42□□□□□ -0.58
SMG5-203ENST00000473643 NBPF7P0C2Y1 421 aaPredicted RBP11.42□□□□□ -0.58
SMG5-203ENST00000473643 VEGFAP15692 232 aaPredicted RBP11.42□□□□□ -0.58
SMG5-203ENST00000473643 IRX6P78412 446 aaPredicted RBP11.42□□□□□ -0.58
SMG5-203ENST00000473643 ZBTB38Q8NAP3 1195 aaPredicted RBP11.42□□□□□ -0.58
SMG5-203ENST00000473643 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
SMG5-203ENST00000473643 FAM89AQ96GI7 184 aa11.42□□□□□ -0.58
SMG5-203ENST00000473643 MEIS3Q99687 375 aa11.42□□□□□ -0.58
SMG5-203ENST00000473643 ZNF277Q9NRM2 450 aaPredicted RBP11.42□□□□□ -0.58
SMG5-203ENST00000473643 C9orf78Q9NZ63 289 aaPredicted RBP11.42□□□□□ -0.58
SMG5-203ENST00000473643 ARFGEF2Q9Y6D5 1785 aa11.41□□□□□ -0.58
SMG5-203ENST00000473643 CDHR2Q9BYE9 1310 aa11.41□□□□□ -0.58
SMG5-203ENST00000473643 FER1L6Q2WGJ9 1857 aa11.41□□□□□ -0.58
SMG5-203ENST00000473643 HSPA6P17066 643 aa11.41□□□□□ -0.58
SMG5-203ENST00000473643 SF3B3Q15393 1217 aaKnown RBP11.41□□□□□ -0.58
SMG5-203ENST00000473643 PLA2G12BQ9BX93 195 aa11.41□□□□□ -0.58
SMG5-203ENST00000473643 ATP6V0A2Q9Y487 856 aa11.41□□□□□ -0.58
SMG5-203ENST00000473643 TNRC6CQ9HCJ0 1690 aaKnown RBP11.4□□□□□ -0.58
SMG5-203ENST00000473643 PPEF1O14829 653 aaPredicted RBP11.4□□□□□ -0.58
SMG5-203ENST00000473643 GNAI2P04899 355 aa11.4□□□□□ -0.58
SMG5-203ENST00000473643 UBTFL1P0CB47 393 aaPredicted RBP11.4□□□□□ -0.58
SMG5-203ENST00000473643 IARSP41252 1262 aaKnown RBP11.4□□□□□ -0.58
SMG5-203ENST00000473643 SP8Q8IXZ3 490 aa11.4□□□□□ -0.58
SMG5-203ENST00000473643 FZD9O00144 591 aa11.39□□□□□ -0.59
SMG5-203ENST00000473643 IRS4O14654 1257 aaPredicted RBP11.39□□□□□ -0.59
SMG5-203ENST00000473643 DDNO94850 711 aaPredicted RBP11.39□□□□□ -0.59
SMG5-203ENST00000473643 HSP90B1P14625 803 aaKnown RBP11.39□□□□□ -0.59
SMG5-203ENST00000473643 FSTL1Q12841 308 aa11.39□□□□□ -0.59
SMG5-203ENST00000473643 DDX46Q7L014 1031 aaKnown RBP11.39□□□□□ -0.59
SMG5-203ENST00000473643 UBE3BQ7Z3V4 1068 aa11.39□□□□□ -0.59
SMG5-203ENST00000473643 SLC51AQ86UW1 340 aa11.39□□□□□ -0.59
SMG5-203ENST00000473643 C16orf71Q8IYS4 520 aaPredicted RBP11.39□□□□□ -0.59
SMG5-203ENST00000473643 KAZALD1Q96I82 304 aa11.39□□□□□ -0.59
SMG5-203ENST00000473643 MTX1Q13505 466 aa11.38□□□□□ -0.59
SMG5-203ENST00000473643 GRAPQ13588 217 aa11.38□□□□□ -0.59
SMG5-203ENST00000473643 RABL6Q3YEC7 729 aaPredicted RBP11.38□□□□□ -0.59
SMG5-203ENST00000473643 TMC4Q7Z404 712 aa11.38□□□□□ -0.59
SMG5-203ENST00000473643 RPAP2Q8IXW5 612 aaPredicted RBP11.38□□□□□ -0.59
SMG5-203ENST00000473643 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
SMG5-203ENST00000473643 SUCLG2Q96I99 432 aa11.38□□□□□ -0.59
SMG5-203ENST00000473643 L3MBTL3Q96JM7 780 aaPredicted RBP11.38□□□□□ -0.59
SMG5-203ENST00000473643 RTFDC1Q9BY42 306 aaPredicted RBP11.38□□□□□ -0.59
SMG5-203ENST00000473643 TMX4Q9H1E5 349 aaPredicted RBP11.38□□□□□ -0.59
SMG5-203ENST00000473643 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
SMG5-203ENST00000473643 LRRFIP2Q9Y608 721 aaKnown RBP11.38□□□□□ -0.59
SMG5-203ENST00000473643 CSF1RP07333 972 aa11.37□□□□□ -0.59
SMG5-203ENST00000473643 FOXO4P98177 505 aa11.37□□□□□ -0.59
SMG5-203ENST00000473643 RTL5Q5HYW3 569 aaPredicted RBP11.37□□□□□ -0.59
SMG5-203ENST00000473643 EPHA10Q5JZY3 1008 aa11.37□□□□□ -0.59
SMG5-203ENST00000473643 JDP2Q8WYK2 163 aa11.37□□□□□ -0.59
SMG5-203ENST00000473643 JARID2Q92833 1246 aaPredicted RBP11.37□□□□□ -0.59
SMG5-203ENST00000473643 PDE8AO60658 829 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms