RNA–Protein interactions for RNA: ENST00000472949.1

FBXL3-204, Transcript of F-box and leucine rich repeat protein 3, human

TSL 5

Gene FBXL3, Length 329 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXL3-204	ENST00000472949	OLFM4	Q6UX06	510 aa		33.74	■■■□□ 2.99
FBXL3-204	ENST00000472949	SRCIN1	Q9C0H9	1055 aa		33.74	■■■□□ 2.99
FBXL3-204	ENST00000472949	TAOK3	Q9H2K8	898 aa		33.74	■■■□□ 2.99
FBXL3-204	ENST00000472949	GRIPAP1	Q4V328	841 aa		33.73	■■■□□ 2.99
FBXL3-204	ENST00000472949	RNF181	Q9P0P0	153 aa		33.73	■■■□□ 2.99
FBXL3-204	ENST00000472949	CCDC88A	Q3V6T2	1871 aa		33.72	■■■□□ 2.99
FBXL3-204	ENST00000472949	CASP7	P55210	303 aa		33.72	■■■□□ 2.99
FBXL3-204	ENST00000472949	CCDC152	Q4G0S7	254 aa		33.72	■■■□□ 2.99
FBXL3-204	ENST00000472949	ATP6V0A2	Q9Y487	856 aa		33.72	■■■□□ 2.99
FBXL3-204	ENST00000472949	PRELP	P51888	382 aa		33.71	■■■□□ 2.99
FBXL3-204	ENST00000472949	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.71	■■■□□ 2.99
FBXL3-204	ENST00000472949	TMX4	Q9H1E5	349 aa	Predicted RBP	33.71	■■■□□ 2.99
FBXL3-204	ENST00000472949	NOB1	Q9ULX3	412 aa	Known RBP	33.71	■■■□□ 2.99
FBXL3-204	ENST00000472949	TAF1	P21675	1872 aa		33.71	■■■□□ 2.99
FBXL3-204	ENST00000472949	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.7	■■■□□ 2.99
FBXL3-204	ENST00000472949	TMC4	Q7Z404	712 aa		33.7	■■■□□ 2.99
FBXL3-204	ENST00000472949	PLA2G12B	Q9BX93	195 aa		33.7	■■■□□ 2.99
FBXL3-204	ENST00000472949	CTSW	P56202	376 aa		33.69	■■■□□ 2.98
FBXL3-204	ENST00000472949	SP8	Q8IXZ3	490 aa		33.69	■■■□□ 2.98
FBXL3-204	ENST00000472949	MYH3	P11055	1940 aa		33.68	■■■□□ 2.98
FBXL3-204	ENST00000472949	TTLL11	Q8NHH1	800 aa		33.67	■■■□□ 2.98
FBXL3-204	ENST00000472949	CELF1	Q92879	486 aa	Known RBP	33.67	■■■□□ 2.98
FBXL3-204	ENST00000472949	GRM8	O00222	908 aa		33.66	■■■□□ 2.98
FBXL3-204	ENST00000472949	RPS8	P62241	208 aa	Known RBP	33.66	■■■□□ 2.98
FBXL3-204	ENST00000472949	SNED1	Q8TER0	1413 aa		33.66	■■■□□ 2.98
FBXL3-204	ENST00000472949	PSMD1	Q99460	953 aa		33.66	■■■□□ 2.98
FBXL3-204	ENST00000472949	API5	Q9BZZ5	524 aa	Known RBP	33.66	■■■□□ 2.98
FBXL3-204	ENST00000472949	C9orf78	Q9NZ63	289 aa	Predicted RBP	33.66	■■■□□ 2.98
FBXL3-204	ENST00000472949	ARHGAP45	Q92619	1136 aa		33.65	■■■□□ 2.98
FBXL3-204	ENST00000472949	CCDC85A	Q96PX6	553 aa	Predicted RBP	33.65	■■■□□ 2.98
FBXL3-204	ENST00000472949	SEC31B	Q9NQW1	1179 aa		33.65	■■■□□ 2.98
FBXL3-204	ENST00000472949	KIF16B	Q96L93	1317 aa		33.64	■■■□□ 2.98
FBXL3-204	ENST00000472949	DICER1	Q9UPY3	1922 aa	Known RBP	33.63	■■■□□ 2.97
FBXL3-204	ENST00000472949	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.63	■■■□□ 2.97
FBXL3-204	ENST00000472949	BCAR3	O75815	825 aa		33.62	■■■□□ 2.97
FBXL3-204	ENST00000472949	SLC51A	Q86UW1	340 aa		33.62	■■■□□ 2.97
FBXL3-204	ENST00000472949	RTL9	Q8NET4	1388 aa		33.61	■■■□□ 2.97
FBXL3-204	ENST00000472949	IPO8	O15397	1037 aa	Known RBP	33.61	■■■□□ 2.97
FBXL3-204	ENST00000472949	CSF1R	P07333	972 aa		33.61	■■■□□ 2.97
FBXL3-204	ENST00000472949	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.61	■■■□□ 2.97
FBXL3-204	ENST00000472949	GREM2	Q9H772	168 aa		33.6	■■■□□ 2.97
FBXL3-204	ENST00000472949	UTY	O14607	1347 aa		33.59	■■■□□ 2.97
FBXL3-204	ENST00000472949	CCT4	P50991	539 aa	Known RBP	33.59	■■■□□ 2.97
FBXL3-204	ENST00000472949	MPND	Q8N594	471 aa		33.59	■■■□□ 2.97
FBXL3-204	ENST00000472949	FOXO4	P98177	505 aa		33.58	■■■□□ 2.97
FBXL3-204	ENST00000472949	ANKRD18A	Q8IVF6	992 aa		33.58	■■■□□ 2.97
FBXL3-204	ENST00000472949	CDC5L	Q99459	802 aa	Known RBP	33.58	■■■□□ 2.97
FBXL3-204	ENST00000472949	COL4A1	P02462	1669 aa		33.58	■■■□□ 2.97
FBXL3-204	ENST00000472949	IARS	P41252	1262 aa	Known RBP	33.57	■■■□□ 2.96
FBXL3-204	ENST00000472949	DPP8	Q6V1X1	898 aa	Predicted RBP	33.57	■■■□□ 2.96
FBXL3-204	ENST00000472949	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.57	■■■□□ 2.96
FBXL3-204	ENST00000472949	NBPF7	P0C2Y1	421 aa	Predicted RBP	33.56	■■■□□ 2.96
FBXL3-204	ENST00000472949	SUPT20H	Q8NEM7	779 aa		33.56	■■■□□ 2.96
FBXL3-204	ENST00000472949	LRRC37A	A6NMS7	1700 aa		33.54	■■■□□ 2.96
FBXL3-204	ENST00000472949	ZNF526	Q8TF50	670 aa	Predicted RBP	33.54	■■■□□ 2.96
FBXL3-204	ENST00000472949	FRAT1	Q92837	279 aa	Predicted RBP	33.54	■■■□□ 2.96
FBXL3-204	ENST00000472949	USP44	Q9H0E7	712 aa		33.54	■■■□□ 2.96
FBXL3-204	ENST00000472949	VPS33B	Q9H267	617 aa		33.54	■■■□□ 2.96
FBXL3-204	ENST00000472949	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.54	■■■□□ 2.96
FBXL3-204	ENST00000472949	ITGA6	P23229	1130 aa		33.53	■■■□□ 2.96
FBXL3-204	ENST00000472949	FAM161A	Q3B820	660 aa		33.53	■■■□□ 2.96
FBXL3-204	ENST00000472949	EPHA10	Q5JZY3	1008 aa		33.53	■■■□□ 2.96
FBXL3-204	ENST00000472949	TIAM2	Q8IVF5	1701 aa		33.53	■■■□□ 2.96
FBXL3-204	ENST00000472949	LMBR1L	Q6UX01	489 aa		33.52	■■■□□ 2.96
FBXL3-204	ENST00000472949	ATF7IP	Q6VMQ6	1270 aa		33.52	■■■□□ 2.96
FBXL3-204	ENST00000472949	SUCLG2	Q96I99	432 aa		33.52	■■■□□ 2.96
FBXL3-204	ENST00000472949	BSDC1	Q9NW68	430 aa	Predicted RBP	33.51	■■■□□ 2.95
FBXL3-204	ENST00000472949	NSFL1C	Q9UNZ2	370 aa	Known RBP	33.51	■■■□□ 2.95
FBXL3-204	ENST00000472949	GPSM2	P81274	684 aa		33.5	■■■□□ 2.95
FBXL3-204	ENST00000472949	KAZALD1	Q96I82	304 aa		33.5	■■■□□ 2.95
FBXL3-204	ENST00000472949	KDM2B	Q8NHM5	1336 aa		33.5	■■■□□ 2.95
FBXL3-204	ENST00000472949	ANKRD18B	A2A2Z9	1011 aa		33.49	■■■□□ 2.95
FBXL3-204	ENST00000472949	GLTPD2	A6NH11	291 aa		33.49	■■■□□ 2.95
FBXL3-204	ENST00000472949	TRIM27	P14373	513 aa		33.49	■■■□□ 2.95
FBXL3-204	ENST00000472949	IGHMBP2	P38935	993 aa	Known RBP	33.49	■■■□□ 2.95
FBXL3-204	ENST00000472949	ZKSCAN2	Q63HK3	967 aa		33.49	■■■□□ 2.95
FBXL3-204	ENST00000472949	INTS3	Q68E01	1043 aa	Known RBP	33.49	■■■□□ 2.95
FBXL3-204	ENST00000472949	LARGE2	Q8N3Y3	721 aa		33.49	■■■□□ 2.95
FBXL3-204	ENST00000472949	JDP2	Q8WYK2	163 aa		33.49	■■■□□ 2.95
FBXL3-204	ENST00000472949	CHMP3	Q9Y3E7	222 aa		33.49	■■■□□ 2.95
FBXL3-204	ENST00000472949	IFIT5	Q13325	482 aa	Known RBP	33.48	■■■□□ 2.95
FBXL3-204	ENST00000472949	DPY19L2	Q6NUT2	758 aa		33.48	■■■□□ 2.95
FBXL3-204	ENST00000472949	PPIP5K2	O43314	1243 aa		33.47	■■■□□ 2.95
FBXL3-204	ENST00000472949	PODXL2	Q9NZ53	605 aa		33.47	■■■□□ 2.95
FBXL3-204	ENST00000472949	MPHOSPH8	Q99549	860 aa		33.45	■■■□□ 2.95
FBXL3-204	ENST00000472949	ANKIB1	Q9P2G1	1089 aa		33.45	■■■□□ 2.95
FBXL3-204	ENST00000472949	POLL	Q9UGP5	575 aa		33.45	■■■□□ 2.95
FBXL3-204	ENST00000472949	FZD9	O00144	591 aa		33.44	■■■□□ 2.94
FBXL3-204	ENST00000472949	KIAA2012	Q0VF49	1180 aa		33.44	■■■□□ 2.94
FBXL3-204	ENST00000472949	AOC3	Q16853	763 aa		33.44	■■■□□ 2.94
FBXL3-204	ENST00000472949	CCDC57	Q2TAC2	916 aa		33.44	■■■□□ 2.94
FBXL3-204	ENST00000472949	RABL6	Q3YEC7	729 aa	Predicted RBP	33.44	■■■□□ 2.94
FBXL3-204	ENST00000472949	BICC1	Q9H694	974 aa	Known RBP	33.44	■■■□□ 2.94
FBXL3-204	ENST00000472949	MINPP1	Q9UNW1	487 aa		33.44	■■■□□ 2.94
FBXL3-204	ENST00000472949	DUOX1	Q9NRD9	1551 aa		33.43	■■■□□ 2.94
FBXL3-204	ENST00000472949	C6orf229	H3BNL8	230 aa		33.43	■■■□□ 2.94
FBXL3-204	ENST00000472949	TBC1D16	Q8TBP0	767 aa		33.43	■■■□□ 2.94
FBXL3-204	ENST00000472949	TNN	Q9UQP3	1299 aa		33.43	■■■□□ 2.94
FBXL3-204	ENST00000472949	SPEF2	Q9C093	1822 aa		33.43	■■■□□ 2.94
FBXL3-204	ENST00000472949	LTBP1	Q14766	1721 aa		33.42	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms