RNA–Protein interactions for RNA: ENST00000470819.2

CDKN2A-204, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-204ENST00000470819 LMOD1P29536 600 aaPredicted RBP18.4■□□□□ 0.54
CDKN2A-204ENST00000470819 SCNN1DP51172 638 aa18.4■□□□□ 0.54
CDKN2A-204ENST00000470819 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
CDKN2A-204ENST00000470819 SF3B3Q15393 1217 aaKnown RBP18.4■□□□□ 0.54
CDKN2A-204ENST00000470819 CNTROBQ8N137 903 aa18.4■□□□□ 0.54
CDKN2A-204ENST00000470819 CXCL9Q07325 125 aa18.39■□□□□ 0.53
CDKN2A-204ENST00000470819 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
CDKN2A-204ENST00000470819 TSPYL6Q8N831 410 aa18.39■□□□□ 0.53
CDKN2A-204ENST00000470819 CELF1Q92879 486 aaKnown RBP18.39■□□□□ 0.53
CDKN2A-204ENST00000470819 ZNRF3Q9ULT6 936 aa18.39■□□□□ 0.53
CDKN2A-204ENST00000470819 SCN4AP35499 1836 aa18.39■□□□□ 0.53
CDKN2A-204ENST00000470819 IRS4O14654 1257 aaPredicted RBP18.38■□□□□ 0.53
CDKN2A-204ENST00000470819 KIAA2012Q0VF49 1180 aa18.38■□□□□ 0.53
CDKN2A-204ENST00000470819 MYD88Q99836 296 aa18.38■□□□□ 0.53
CDKN2A-204ENST00000470819 TMEM88BA6NKF7 163 aa18.37■□□□□ 0.53
CDKN2A-204ENST00000470819 COL13A1Q5TAT6 717 aaPredicted RBP18.37■□□□□ 0.53
CDKN2A-204ENST00000470819 TMC4Q7Z404 712 aa18.37■□□□□ 0.53
CDKN2A-204ENST00000470819 TSR2Q969E8 191 aaKnown RBP18.37■□□□□ 0.53
CDKN2A-204ENST00000470819 HSPA1AP0DMV8 641 aaKnown RBP18.36■□□□□ 0.53
CDKN2A-204ENST00000470819 HSPA1BP0DMV9 641 aaKnown RBP18.36■□□□□ 0.53
CDKN2A-204ENST00000470819 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
CDKN2A-204ENST00000470819 ANKRD36CQ5JPF3 1778 aa18.36■□□□□ 0.53
CDKN2A-204ENST00000470819 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
CDKN2A-204ENST00000470819 ZBTB38Q8NAP3 1195 aaPredicted RBP18.36■□□□□ 0.53
CDKN2A-204ENST00000470819 JARID2Q92833 1246 aaPredicted RBP18.36■□□□□ 0.53
CDKN2A-204ENST00000470819 NSFL1CQ9UNZ2 370 aaKnown RBP18.36■□□□□ 0.53
CDKN2A-204ENST00000470819 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
CDKN2A-204ENST00000470819 GPRC5DQ9NZD1 345 aa18.35■□□□□ 0.53
CDKN2A-204ENST00000470819 CNTNAP1P78357 1384 aa18.34■□□□□ 0.53
CDKN2A-204ENST00000470819 RAD17O75943 681 aa18.34■□□□□ 0.53
CDKN2A-204ENST00000470819 GMPSP49915 693 aaPredicted RBP18.34■□□□□ 0.53
CDKN2A-204ENST00000470819 CCDC27Q2M243 656 aa18.34■□□□□ 0.53
CDKN2A-204ENST00000470819 CIAPIN1Q6FI81 312 aa18.34■□□□□ 0.53
CDKN2A-204ENST00000470819 USP50Q70EL3 339 aaPredicted RBP18.34■□□□□ 0.53
CDKN2A-204ENST00000470819 METTL22Q9BUU2 404 aaPredicted RBP18.34■□□□□ 0.53
CDKN2A-204ENST00000470819 LAMB2P55268 1798 aa18.33■□□□□ 0.53
CDKN2A-204ENST00000470819 LTBP1Q14766 1721 aa18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 YDJCA8MPS7 323 aa18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 DDX58O95786 925 aaKnown RBP18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 RPS8P62241 208 aaKnown RBP18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 GPSM2P81274 684 aa18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 FMR1Q06787 632 aaKnown RBP eCLIP18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 CCDC191Q8NCU4 936 aa18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 CHMP4AQ9BY43 222 aa18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 MRS2Q9HD23 443 aa18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 POLLQ9UGP5 575 aa18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
CDKN2A-204ENST00000470819 ADAMTSL1Q8N6G6 1762 aa18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 ZNF316A6NFI3 1004 aaPredicted RBP18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 RIMBP2O15034 1052 aa18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 PCCAP05165 728 aaPredicted RBP18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 VEGFBP49765 207 aa18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 TNIP1Q15025 636 aa18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 WASHC4Q2M389 1173 aa18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 BCL2L13Q9BXK5 485 aa18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 ADARB2Q9NS39 739 aaKnown RBP18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 CWC25Q9NXE8 425 aaPredicted RBP18.32■□□□□ 0.52
CDKN2A-204ENST00000470819 KSR2Q6VAB6 950 aa18.31■□□□□ 0.52
CDKN2A-204ENST00000470819 PI4KAP2A4QPH2 592 aa18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 TRAF5O00463 557 aa18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 ANP32CO43423 234 aa18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 HSP90B1P14625 803 aaKnown RBP18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 TWISTNBQ3B726 338 aaPredicted RBP18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 PI4KAP1Q8N8J0 262 aa18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 GPR101Q96P66 508 aaPredicted RBP18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 CCDC85AQ96PX6 553 aaPredicted RBP18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 STK31Q9BXU1 1019 aa18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 DBNDD1Q9H9R9 158 aa18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 COL4A1P02462 1669 aa18.3■□□□□ 0.52
CDKN2A-204ENST00000470819 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
CDKN2A-204ENST00000470819 TAF1P21675 1872 aa18.29■□□□□ 0.52
CDKN2A-204ENST00000470819 SHTN1A0MZ66 631 aa18.29■□□□□ 0.52
CDKN2A-204ENST00000470819 PDE8AO60658 829 aa18.29■□□□□ 0.52
CDKN2A-204ENST00000470819 DEFB115Q30KQ5 88 aa18.29■□□□□ 0.52
CDKN2A-204ENST00000470819 G2E3Q7L622 706 aa18.29■□□□□ 0.52
CDKN2A-204ENST00000470819 SALL2Q9Y467 1007 aaPredicted RBP18.29■□□□□ 0.52
CDKN2A-204ENST00000470819 DUOX1Q9NRD9 1551 aa18.29■□□□□ 0.52
CDKN2A-204ENST00000470819 RASSF10A6NK89 507 aa18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 IGKV5-2P06315 115 aa18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 HIRAP54198 1017 aaPredicted RBP18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 DOK7Q18PE1 504 aa18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 CCDC152Q4G0S7 254 aa18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 TBC1D16Q8TBP0 767 aa18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 KCNQ5Q9NR82 932 aa18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 CNOT7Q9UIV1 285 aaKnown RBP18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 ABT1Q9ULW3 272 aaKnown RBP18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
CDKN2A-204ENST00000470819 IL16Q14005 1332 aa18.27■□□□□ 0.52
CDKN2A-204ENST00000470819 PSMD14O00487 310 aa18.27■□□□□ 0.52
CDKN2A-204ENST00000470819 CST9Q5W186 159 aa18.27■□□□□ 0.52
CDKN2A-204ENST00000470819 EYA3Q99504 573 aa18.27■□□□□ 0.52
CDKN2A-204ENST00000470819 ECE2O60344 883 aa18.26■□□□□ 0.51
CDKN2A-204ENST00000470819 CWF19L2Q2TBE0 894 aaKnown RBP18.26■□□□□ 0.51
CDKN2A-204ENST00000470819 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
CDKN2A-204ENST00000470819 TNS4Q8IZW8 715 aa18.26■□□□□ 0.51
CDKN2A-204ENST00000470819 TRPM4Q8TD43 1214 aa18.26■□□□□ 0.51
CDKN2A-204ENST00000470819 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms