RNA–Protein interactions for RNA: ENST00000470518.5

SGSM3-208, Transcript of small G protein signaling modulator 3, humanhuman

TSL 3

Gene SGSM3, Length 854 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-208ENST00000470518 NIM1KQ8IY84 436 aa17.45■□□□□ 0.38
SGSM3-208ENST00000470518 PLBD2Q8NHP8 589 aa17.45■□□□□ 0.38
SGSM3-208ENST00000470518 GRAPLQ8TC17 118 aaPredicted RBP17.45■□□□□ 0.38
SGSM3-208ENST00000470518 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
SGSM3-208ENST00000470518 GPRC5DQ9NZD1 345 aa17.45■□□□□ 0.38
SGSM3-208ENST00000470518 TRMT112Q9UI30 125 aaKnown RBP17.45■□□□□ 0.38
SGSM3-208ENST00000470518 SHTN1A0MZ66 631 aa17.44■□□□□ 0.38
SGSM3-208ENST00000470518 TRAF5O00463 557 aa17.44■□□□□ 0.38
SGSM3-208ENST00000470518 SP8Q8IXZ3 490 aa17.44■□□□□ 0.38
SGSM3-208ENST00000470518 PSME4Q14997 1843 aa17.44■□□□□ 0.38
SGSM3-208ENST00000470518 ATP5J2-PTCD1G3V325 749 aa17.43■□□□□ 0.38
SGSM3-208ENST00000470518 GMPSP49915 693 aaPredicted RBP17.43■□□□□ 0.38
SGSM3-208ENST00000470518 DUSP27Q5VZP5 1158 aa17.43■□□□□ 0.38
SGSM3-208ENST00000470518 CST9Q5W186 159 aa17.43■□□□□ 0.38
SGSM3-208ENST00000470518 CELF1Q92879 486 aaKnown RBP17.43■□□□□ 0.38
SGSM3-208ENST00000470518 VPS33BQ9H267 617 aa17.43■□□□□ 0.38
SGSM3-208ENST00000470518 CLEC11AQ9Y240 323 aa17.43■□□□□ 0.38
SGSM3-208ENST00000470518 BBOX1O75936 387 aa17.42■□□□□ 0.38
SGSM3-208ENST00000470518 DPP8Q6V1X1 898 aaPredicted RBP17.42■□□□□ 0.38
SGSM3-208ENST00000470518 FAM89AQ96GI7 184 aa17.42■□□□□ 0.38
SGSM3-208ENST00000470518 CHMP4AQ9BY43 222 aa17.42■□□□□ 0.38
SGSM3-208ENST00000470518 WBP1LQ9NX94 342 aa17.42■□□□□ 0.38
SGSM3-208ENST00000470518 DBF4Q9UBU7 674 aaPredicted RBP17.42■□□□□ 0.38
SGSM3-208ENST00000470518 ZNRF3Q9ULT6 936 aa17.42■□□□□ 0.38
SGSM3-208ENST00000470518 ZNF316A6NFI3 1004 aaPredicted RBP17.41■□□□□ 0.38
SGSM3-208ENST00000470518 HIRAP54198 1017 aaPredicted RBP17.41■□□□□ 0.38
SGSM3-208ENST00000470518 SF3B3Q15393 1217 aaKnown RBP17.41■□□□□ 0.38
SGSM3-208ENST00000470518 ANKRD13DQ6ZTN6 518 aa17.41■□□□□ 0.38
SGSM3-208ENST00000470518 USP50Q70EL3 339 aaPredicted RBP17.41■□□□□ 0.38
SGSM3-208ENST00000470518 TRPM4Q8TD43 1214 aa17.41■□□□□ 0.38
SGSM3-208ENST00000470518 RTL9Q8NET4 1388 aa17.4■□□□□ 0.38
SGSM3-208ENST00000470518 APAF1O14727 1248 aa17.4■□□□□ 0.38
SGSM3-208ENST00000470518 ANP32CO43423 234 aa17.4■□□□□ 0.38
SGSM3-208ENST00000470518 CAPN15O75808 1086 aa17.4■□□□□ 0.38
SGSM3-208ENST00000470518 LMOD1P29536 600 aaPredicted RBP17.4■□□□□ 0.38
SGSM3-208ENST00000470518 TRIM28Q13263 835 aaKnown RBP17.4■□□□□ 0.38
SGSM3-208ENST00000470518 CCDC184Q52MB2 194 aa17.4■□□□□ 0.38
SGSM3-208ENST00000470518 MPNDQ8N594 471 aa17.4■□□□□ 0.38
SGSM3-208ENST00000470518 PHAXQ9H814 394 aaKnown RBP17.4■□□□□ 0.38
SGSM3-208ENST00000470518 CDHR2Q9BYE9 1310 aa17.4■□□□□ 0.38
SGSM3-208ENST00000470518 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
SGSM3-208ENST00000470518 RAD17O75943 681 aa17.39■□□□□ 0.37
SGSM3-208ENST00000470518 DDX46Q7L014 1031 aaKnown RBP17.39■□□□□ 0.37
SGSM3-208ENST00000470518 C8orf58Q8NAV2 365 aa17.39■□□□□ 0.37
SGSM3-208ENST00000470518 ADARB2Q9NS39 739 aaKnown RBP17.39■□□□□ 0.37
SGSM3-208ENST00000470518 IFT57Q9NWB7 429 aa17.39■□□□□ 0.37
SGSM3-208ENST00000470518 PGAP2Q9UHJ9 254 aa17.39■□□□□ 0.37
SGSM3-208ENST00000470518 EGFRP00533 1210 aa17.38■□□□□ 0.37
SGSM3-208ENST00000470518 SUPT20HQ8NEM7 779 aa17.38■□□□□ 0.37
SGSM3-208ENST00000470518 GPR101Q96P66 508 aaPredicted RBP17.38■□□□□ 0.37
SGSM3-208ENST00000470518 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
SGSM3-208ENST00000470518 WDR33Q9C0J8 1336 aaKnown RBP17.38■□□□□ 0.37
SGSM3-208ENST00000470518 MYH3P11055 1940 aa17.37■□□□□ 0.37
SGSM3-208ENST00000470518 HSPA8P11142 646 aaKnown RBP17.37■□□□□ 0.37
SGSM3-208ENST00000470518 GPSM2P81274 684 aa17.37■□□□□ 0.37
SGSM3-208ENST00000470518 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
SGSM3-208ENST00000470518 CIAPIN1Q6FI81 312 aa17.37■□□□□ 0.37
SGSM3-208ENST00000470518 GLIS2Q9BZE0 524 aaPredicted RBP17.37■□□□□ 0.37
SGSM3-208ENST00000470518 HYPKQ9NX55 129 aa17.37■□□□□ 0.37
SGSM3-208ENST00000470518 GNAI1P63096 354 aa17.36■□□□□ 0.37
SGSM3-208ENST00000470518 DEFB115Q30KQ5 88 aa17.36■□□□□ 0.37
SGSM3-208ENST00000470518 DLK2Q6UY11 383 aa17.36■□□□□ 0.37
SGSM3-208ENST00000470518 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
SGSM3-208ENST00000470518 TMX4Q9H1E5 349 aaPredicted RBP17.36■□□□□ 0.37
SGSM3-208ENST00000470518 PRDM10Q9NQV6 1147 aa17.36■□□□□ 0.37
SGSM3-208ENST00000470518 KCNQ5Q9NR82 932 aa17.36■□□□□ 0.37
SGSM3-208ENST00000470518 TLL2Q9Y6L7 1015 aa17.36■□□□□ 0.37
SGSM3-208ENST00000470518 ZNF609O15014 1411 aa17.36■□□□□ 0.37
SGSM3-208ENST00000470518 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
SGSM3-208ENST00000470518 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
SGSM3-208ENST00000470518 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
SGSM3-208ENST00000470518 SEC31BQ9NQW1 1179 aa17.35■□□□□ 0.37
SGSM3-208ENST00000470518 ABT1Q9ULW3 272 aaKnown RBP17.35■□□□□ 0.37
SGSM3-208ENST00000470518 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
SGSM3-208ENST00000470518 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
SGSM3-208ENST00000470518 ELL2O00472 640 aaPredicted RBP17.34■□□□□ 0.37
SGSM3-208ENST00000470518 PSMD14O00487 310 aa17.34■□□□□ 0.37
SGSM3-208ENST00000470518 CTCFP49711 727 aaPredicted RBP17.34■□□□□ 0.37
SGSM3-208ENST00000470518 CAPNS2Q96L46 248 aa17.34■□□□□ 0.37
SGSM3-208ENST00000470518 DBNDD1Q9H9R9 158 aa17.34■□□□□ 0.37
SGSM3-208ENST00000470518 LBX1P52954 281 aa17.33■□□□□ 0.36
SGSM3-208ENST00000470518 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.36
SGSM3-208ENST00000470518 ZBTB38Q8NAP3 1195 aaPredicted RBP17.33■□□□□ 0.36
SGSM3-208ENST00000470518 TBC1D16Q8TBP0 767 aa17.33■□□□□ 0.36
SGSM3-208ENST00000470518 POLR2AP24928 1970 aaKnown RBP17.33■□□□□ 0.36
SGSM3-208ENST00000470518 HTTP42858 3142 aa17.32■□□□□ 0.36
SGSM3-208ENST00000470518 TNRC18O15417 2968 aaPredicted RBP17.32■□□□□ 0.36
SGSM3-208ENST00000470518 MICALL2Q8IY33 904 aa17.32■□□□□ 0.36
SGSM3-208ENST00000470518 JARID2Q92833 1246 aaPredicted RBP17.32■□□□□ 0.36
SGSM3-208ENST00000470518 MYD88Q99836 296 aa17.32■□□□□ 0.36
SGSM3-208ENST00000470518 ECE2O60344 883 aa17.31■□□□□ 0.36
SGSM3-208ENST00000470518 AOC2O75106 756 aa17.31■□□□□ 0.36
SGSM3-208ENST00000470518 IGKV5-2P06315 115 aa17.31■□□□□ 0.36
SGSM3-208ENST00000470518 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
SGSM3-208ENST00000470518 TSR2Q969E8 191 aaKnown RBP17.31■□□□□ 0.36
SGSM3-208ENST00000470518 PODXL2Q9NZ53 605 aa17.31■□□□□ 0.36
SGSM3-208ENST00000470518 CNOT7Q9UIV1 285 aaKnown RBP17.31■□□□□ 0.36
SGSM3-208ENST00000470518 NSFL1CQ9UNZ2 370 aaKnown RBP17.31■□□□□ 0.36
SGSM3-208ENST00000470518 ASTN2O75129 1339 aaPredicted RBP17.3■□□□□ 0.36
SGSM3-208ENST00000470518 WTIPA6NIX2 430 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms