RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	SLC27A3	Q5K4L6	730 aa		13.39	□□□□□ -0.27
SND1-208	ENST00000470463	UTP14A	Q9BVJ6	771 aa	Known RBP	13.39	□□□□□ -0.27
SND1-208	ENST00000470463	BCL11A	Q9H165	835 aa		13.39	□□□□□ -0.27
SND1-208	ENST00000470463	CCNL1	Q9UK58	526 aa	Predicted RBP	13.39	□□□□□ -0.27
SND1-208	ENST00000470463	ANKRD18B	A2A2Z9	1011 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	IRS4	O14654	1257 aa	Predicted RBP	13.38	□□□□□ -0.27
SND1-208	ENST00000470463	ADRA2B	P18089	450 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	MCC	P23508	829 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	CTSW	P56202	376 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	TNNI3K	Q59H18	835 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	TAF7L	Q5H9L4	462 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	LINC00116	Q8NCU8	138 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	RILPL2	Q969X0	211 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	EVI5L	Q96CN4	794 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	FAM89A	Q96GI7	184 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	SIL1	Q9H173	461 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	FPGT-TNNI3K	V9GXZ4	949 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	BRWD3	Q6RI45	1802 aa		13.38	□□□□□ -0.27
SND1-208	ENST00000470463	GPT	P24298	496 aa		13.37	□□□□□ -0.27
SND1-208	ENST00000470463	CEP126	Q9P2H0	1117 aa		13.37	□□□□□ -0.27
SND1-208	ENST00000470463	RTCB	Q9Y3I0	505 aa	Known RBP	13.37	□□□□□ -0.27
SND1-208	ENST00000470463	LY75	O60449	1722 aa		13.36	□□□□□ -0.27
SND1-208	ENST00000470463	ZPR1	O75312	459 aa		13.36	□□□□□ -0.27
SND1-208	ENST00000470463	ATP5J	P18859	108 aa		13.36	□□□□□ -0.27
SND1-208	ENST00000470463	CHML	P26374	656 aa		13.36	□□□□□ -0.27
SND1-208	ENST00000470463	TFCP2	Q12800	502 aa		13.36	□□□□□ -0.27
SND1-208	ENST00000470463	TTLL11	Q8NHH1	800 aa		13.36	□□□□□ -0.27
SND1-208	ENST00000470463	JARID2	Q92833	1246 aa	Predicted RBP	13.36	□□□□□ -0.27
SND1-208	ENST00000470463	EAF2	Q96CJ1	260 aa	Predicted RBP	13.36	□□□□□ -0.27
SND1-208	ENST00000470463	NYX	Q9GZU5	481 aa		13.36	□□□□□ -0.27
SND1-208	ENST00000470463	NARF	Q9UHQ1	456 aa		13.36	□□□□□ -0.27
SND1-208	ENST00000470463	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
SND1-208	ENST00000470463	SBF2	Q86WG5	1849 aa		13.36	□□□□□ -0.27
SND1-208	ENST00000470463	BCOR	Q6W2J9	1755 aa		13.35	□□□□□ -0.27
SND1-208	ENST00000470463	RFX7	Q2KHR2	1363 aa		13.35	□□□□□ -0.27
SND1-208	ENST00000470463	RTL9	Q8NET4	1388 aa		13.35	□□□□□ -0.27
SND1-208	ENST00000470463	TUBGCP6	Q96RT7	1819 aa		13.35	□□□□□ -0.27
SND1-208	ENST00000470463	CCDC152	Q4G0S7	254 aa		13.35	□□□□□ -0.27
SND1-208	ENST00000470463	RTL5	Q5HYW3	569 aa	Predicted RBP	13.35	□□□□□ -0.27
SND1-208	ENST00000470463	ESYT1	Q9BSJ8	1104 aa		13.35	□□□□□ -0.27
SND1-208	ENST00000470463	UBN2	Q6ZU65	1347 aa		13.35	□□□□□ -0.27
SND1-208	ENST00000470463	MYH14	Q7Z406	1995 aa	Known RBP	13.34	□□□□□ -0.27
SND1-208	ENST00000470463	PLSCR1	O15162	318 aa		13.34	□□□□□ -0.27
SND1-208	ENST00000470463	ITGA6	P23229	1130 aa		13.34	□□□□□ -0.27
SND1-208	ENST00000470463	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.34	□□□□□ -0.27
SND1-208	ENST00000470463	ATG9A	Q7Z3C6	839 aa		13.34	□□□□□ -0.27
SND1-208	ENST00000470463	KLHDC4	Q8TBB5	520 aa		13.34	□□□□□ -0.27
SND1-208	ENST00000470463	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
SND1-208	ENST00000470463	USP26	Q9BXU7	913 aa		13.34	□□□□□ -0.27
SND1-208	ENST00000470463	RAD50	Q92878	1312 aa		13.34	□□□□□ -0.27
SND1-208	ENST00000470463	ABCC12	Q96J65	1359 aa		13.33	□□□□□ -0.27
SND1-208	ENST00000470463	MYH3	P11055	1940 aa		13.33	□□□□□ -0.28
SND1-208	ENST00000470463	GNPAT	O15228	680 aa		13.33	□□□□□ -0.28
SND1-208	ENST00000470463	ANAPC15	P60006	121 aa		13.33	□□□□□ -0.28
SND1-208	ENST00000470463	SUSD4	Q5VX71	490 aa		13.33	□□□□□ -0.28
SND1-208	ENST00000470463	TSHZ3	Q63HK5	1081 aa		13.33	□□□□□ -0.28
SND1-208	ENST00000470463	KIAA1211	Q6ZU35	1233 aa		13.33	□□□□□ -0.28
SND1-208	ENST00000470463	SNX21	Q969T3	373 aa		13.33	□□□□□ -0.28
SND1-208	ENST00000470463	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.33	□□□□□ -0.28
SND1-208	ENST00000470463	DIAPH3	Q9NSV4	1193 aa		13.33	□□□□□ -0.28
SND1-208	ENST00000470463	SCN7A	Q01118	1682 aa		13.32	□□□□□ -0.28
SND1-208	ENST00000470463	NTSR2	O95665	410 aa		13.32	□□□□□ -0.28
SND1-208	ENST00000470463	RABEP1	Q15276	862 aa		13.32	□□□□□ -0.28
SND1-208	ENST00000470463	CCDC158	Q5M9N0	1113 aa		13.32	□□□□□ -0.28
SND1-208	ENST00000470463	TRAPPC3L	Q5T215	181 aa		13.32	□□□□□ -0.28
SND1-208	ENST00000470463	LDHAL6A	Q6ZMR3	332 aa		13.32	□□□□□ -0.28
SND1-208	ENST00000470463	HSCB	Q8IWL3	235 aa		13.32	□□□□□ -0.28
SND1-208	ENST00000470463	MROH5	Q6ZUA9	1318 aa		13.32	□□□□□ -0.28
SND1-208	ENST00000470463	AK9	Q5TCS8	1911 aa		13.31	□□□□□ -0.28
SND1-208	ENST00000470463	MSH5	O43196	834 aa		13.31	□□□□□ -0.28
SND1-208	ENST00000470463	RFC4	P35249	363 aa		13.31	□□□□□ -0.28
SND1-208	ENST00000470463	SETDB2	Q96T68	719 aa		13.31	□□□□□ -0.28
SND1-208	ENST00000470463	CDC5L	Q99459	802 aa	Known RBP	13.31	□□□□□ -0.28
SND1-208	ENST00000470463	CNNM1	Q9NRU3	951 aa		13.31	□□□□□ -0.28
SND1-208	ENST00000470463	DBNL	Q9UJU6	430 aa	Known RBP	13.31	□□□□□ -0.28
SND1-208	ENST00000470463	ZNF609	O15014	1411 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	LAMB2	P55268	1798 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	TAF1L	Q8IZX4	1826 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	SGSM2	O43147	1006 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	GTF2E1	P29083	439 aa	Predicted RBP	13.3	□□□□□ -0.28
SND1-208	ENST00000470463	IGHMBP2	P38935	993 aa	Known RBP	13.3	□□□□□ -0.28
SND1-208	ENST00000470463	METTL24	Q5JXM2	366 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	SLC10A5	Q5PT55	438 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	TPTE2	Q6XPS3	522 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	NEUROD6	Q96NK8	337 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	HAUS7	Q99871	368 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	GREM2	Q9H772	168 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	RIPOR2	Q9Y4F9	1068 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463	C4B	P0C0L5	1744 aa		13.3	□□□□□ -0.28
SND1-208	ENST00000470463		A0A1B0GUL7	405 aa		13.29	□□□□□ -0.28
SND1-208	ENST00000470463	SSFA2	P28290	1259 aa		13.29	□□□□□ -0.28
SND1-208	ENST00000470463	LRRC24	Q50LG9	513 aa		13.29	□□□□□ -0.28
SND1-208	ENST00000470463	GORAB	Q5T7V8	394 aa		13.29	□□□□□ -0.28
SND1-208	ENST00000470463	IL17RA	Q96F46	866 aa		13.29	□□□□□ -0.28
SND1-208	ENST00000470463	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.29	□□□□□ -0.28
SND1-208	ENST00000470463	MPHOSPH8	Q99549	860 aa		13.29	□□□□□ -0.28
SND1-208	ENST00000470463	FSD1	Q9BTV5	496 aa		13.29	□□□□□ -0.28
SND1-208	ENST00000470463	BOLA2	Q9H3K6	86 aa		13.29	□□□□□ -0.28
SND1-208	ENST00000470463	ANO2	Q9NQ90	1003 aa		13.29	□□□□□ -0.28
SND1-208	ENST00000470463	SPEF2	Q9C093	1822 aa		13.28	□□□□□ -0.28

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