RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 OS9Q13438 667 aaPredicted RBP9.72□□□□□ -0.85
SMC4-212ENST00000470240 IFFO2Q5TF58 517 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 NBPF6Q5VWK0 638 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 PROSER2Q86WR7 435 aaPredicted RBP9.72□□□□□ -0.85
SMC4-212ENST00000470240 ANKRD24Q8TF21 1146 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 TNPO1Q92973 898 aaKnown RBP9.72□□□□□ -0.85
SMC4-212ENST00000470240 RILPL2Q969X0 211 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 NBPF4Q96M43 638 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 KIF2CQ99661 725 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 STAP2Q9UGK3 403 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 AK9Q5TCS8 1911 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 SURF6O75683 361 aaKnown RBP9.71□□□□□ -0.86
SMC4-212ENST00000470240 KMT5BQ4FZB7 885 aa9.71□□□□□ -0.86
SMC4-212ENST00000470240 ARHGEF25Q86VW2 580 aa9.71□□□□□ -0.86
SMC4-212ENST00000470240 CNTROBQ8N137 903 aa9.71□□□□□ -0.86
SMC4-212ENST00000470240 OTUD7AQ8TE49 926 aaPredicted RBP9.71□□□□□ -0.86
SMC4-212ENST00000470240 SSH3Q8TE77 659 aa9.71□□□□□ -0.86
SMC4-212ENST00000470240 RUFY2Q8WXA3 655 aa9.71□□□□□ -0.86
SMC4-212ENST00000470240 RAPGEF4Q8WZA2 1011 aa9.71□□□□□ -0.86
SMC4-212ENST00000470240 ANP32BQ92688 251 aaKnown RBP9.71□□□□□ -0.86
SMC4-212ENST00000470240 HYPKQ9NX55 129 aa9.71□□□□□ -0.86
SMC4-212ENST00000470240 ABCC6O95255 1503 aa9.71□□□□□ -0.86
SMC4-212ENST00000470240 TRPM3Q9HCF6 1732 aaPredicted RBP9.7□□□□□ -0.86
SMC4-212ENST00000470240 RNMTO43148 476 aaKnown RBP9.7□□□□□ -0.86
SMC4-212ENST00000470240 SRGAP3O43295 1099 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 ATF3P18847 181 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 KIAA1211Q6ZU35 1233 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 KRT28Q7Z3Y7 464 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 NLRP7Q8WX94 980 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 MTRQ99707 1265 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 ESYT1Q9BSJ8 1104 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 USP44Q9H0E7 712 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 C9orf78Q9NZ63 289 aaPredicted RBP9.7□□□□□ -0.86
SMC4-212ENST00000470240 CHPF2Q9P2E5 772 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 BRPF3Q9ULD4 1205 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 SPG7Q9UQ90 795 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 DCCP43146 1447 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 RGPD2P0DJD1 1756 aa9.7□□□□□ -0.86
SMC4-212ENST00000470240 PNMA6EA0A0J9YXQ4 647 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 CFHP08603 1231 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 MST1RQ04912 1400 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 C1orf167Q5SNV9 1468 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 TTC41PQ6P2S7 1318 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 CLEC17AQ6ZS10 378 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 PPP1R42Q7Z4L9 355 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 CLASRPQ8N2M8 674 aaKnown RBP9.69□□□□□ -0.86
SMC4-212ENST00000470240 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
SMC4-212ENST00000470240 RDH13Q8NBN7 331 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 RHPN1Q8TCX5 695 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 TUBGCP6Q96RT7 1819 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
SMC4-212ENST00000470240 C19orf44Q9H6X5 657 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 IL21Q9HBE4 155 aa9.69□□□□□ -0.86
SMC4-212ENST00000470240 SALL3Q9BXA9 1300 aa9.68□□□□□ -0.86
SMC4-212ENST00000470240 PI4KAP2A4QPH2 592 aa9.68□□□□□ -0.86
SMC4-212ENST00000470240 IRF6O14896 467 aa9.68□□□□□ -0.86
SMC4-212ENST00000470240 TATP17735 454 aaPredicted RBP9.68□□□□□ -0.86
SMC4-212ENST00000470240 NEXNQ0ZGT2 675 aa9.68□□□□□ -0.86
SMC4-212ENST00000470240 KSR2Q6VAB6 950 aa9.68□□□□□ -0.86
SMC4-212ENST00000470240 MPRIPQ6WCQ1 1025 aa9.68□□□□□ -0.86
SMC4-212ENST00000470240 FAM43AQ8N2R8 423 aa9.68□□□□□ -0.86
SMC4-212ENST00000470240 PI4KAP1Q8N8J0 262 aa9.68□□□□□ -0.86
SMC4-212ENST00000470240 LRRC59Q96AG4 307 aaKnown RBP9.68□□□□□ -0.86
SMC4-212ENST00000470240 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
SMC4-212ENST00000470240 PCDHB3Q9Y5E6 796 aa9.68□□□□□ -0.86
SMC4-212ENST00000470240 A0A0G2JS52 829 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 HIP1O00291 1037 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 GLRX3O76003 335 aaKnown RBP9.67□□□□□ -0.86
SMC4-212ENST00000470240 CD2BP2O95400 341 aaKnown RBP9.67□□□□□ -0.86
SMC4-212ENST00000470240 IFIT2P09913 472 aaKnown RBP9.67□□□□□ -0.86
SMC4-212ENST00000470240 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 CHMLP26374 656 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 COPS2P61201 443 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 BEND3Q5T5X7 828 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 ORAI2Q96SN7 254 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 PHOX2BQ99453 314 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 LGR6Q9HBX8 967 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 ALS2Q96Q42 1657 aa9.67□□□□□ -0.86
SMC4-212ENST00000470240 SIPA1L3O60292 1781 aaPredicted RBP9.66□□□□□ -0.86
SMC4-212ENST00000470240 NPHP3Q7Z494 1330 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 FSD2A1L4K1 749 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 BAG4O95429 457 aaKnown RBP9.66□□□□□ -0.86
SMC4-212ENST00000470240 SSFA2P28290 1259 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 NEK4P51957 841 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 MTX1Q13505 466 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 SULF1Q8IWU6 871 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 TTC5Q8N0Z6 440 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 LINS1Q8NG48 757 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 CCDC102AQ96A19 550 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 DIAPH3Q9NSV4 1193 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 MAP3K2Q9Y2U5 619 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 DDX49Q9Y6V7 483 aaKnown RBP9.66□□□□□ -0.86
SMC4-212ENST00000470240 ADAMTS7Q9UKP4 1686 aa9.66□□□□□ -0.86
SMC4-212ENST00000470240 GIGYF1O75420 1035 aaPredicted RBP9.65□□□□□ -0.86
SMC4-212ENST00000470240 SLC10A3P09131 477 aa9.65□□□□□ -0.86
SMC4-212ENST00000470240 NCLP19338 710 aaKnown RBP9.65□□□□□ -0.86
SMC4-212ENST00000470240 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms