RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 RTKN2Q8IZC4 609 aa24.48■■□□□ 1.51
PCGF3-208ENST00000470161 C7orf43Q8WVR3 580 aa24.48■■□□□ 1.51
PCGF3-208ENST00000470161 ALDH1L1O75891 902 aa24.47■■□□□ 1.51
PCGF3-208ENST00000470161 RASSF7Q02833 373 aa24.47■■□□□ 1.51
PCGF3-208ENST00000470161 C9orf131Q5VYM1 1079 aa24.47■■□□□ 1.51
PCGF3-208ENST00000470161 TAOK3Q9H2K8 898 aa24.47■■□□□ 1.51
PCGF3-208ENST00000470161 NOB1Q9ULX3 412 aaKnown RBP24.47■■□□□ 1.51
PCGF3-208ENST00000470161 LMNB1P20700 586 aa24.46■■□□□ 1.51
PCGF3-208ENST00000470161 BRPF1P55201 1214 aaPredicted RBP24.46■■□□□ 1.51
PCGF3-208ENST00000470161 GRAPQ13588 217 aa24.46■■□□□ 1.51
PCGF3-208ENST00000470161 GRAPLQ8TC17 118 aaPredicted RBP24.46■■□□□ 1.51
PCGF3-208ENST00000470161 RNF181Q9P0P0 153 aa24.46■■□□□ 1.51
PCGF3-208ENST00000470161 KIF16BQ96L93 1317 aa24.46■■□□□ 1.51
PCGF3-208ENST00000470161 DDX60Q8IY21 1712 aaKnown RBP24.45■■□□□ 1.5
PCGF3-208ENST00000470161 NFKBIEO00221 500 aa24.45■■□□□ 1.5
PCGF3-208ENST00000470161 OLFM4Q6UX06 510 aa24.45■■□□□ 1.5
PCGF3-208ENST00000470161 CCDC85AQ96PX6 553 aaPredicted RBP24.45■■□□□ 1.5
PCGF3-208ENST00000470161 API5Q9BZZ5 524 aaKnown RBP24.45■■□□□ 1.5
PCGF3-208ENST00000470161 GRIPAP1Q4V328 841 aa24.44■■□□□ 1.5
PCGF3-208ENST00000470161 GRM8O00222 908 aa24.43■■□□□ 1.5
PCGF3-208ENST00000470161 IPO8O15397 1037 aaKnown RBP24.43■■□□□ 1.5
PCGF3-208ENST00000470161 CTSWP56202 376 aa24.43■■□□□ 1.5
PCGF3-208ENST00000470161 TMC4Q7Z404 712 aa24.43■■□□□ 1.5
PCGF3-208ENST00000470161 ATP6V0A2Q9Y487 856 aa24.43■■□□□ 1.5
PCGF3-208ENST00000470161 LAMB2P55268 1798 aa24.42■■□□□ 1.5
PCGF3-208ENST00000470161 FKBP4Q02790 459 aaKnown RBP eCLIP24.42■■□□□ 1.5
PCGF3-208ENST00000470161 FRAT1Q92837 279 aaPredicted RBP24.42■■□□□ 1.5
PCGF3-208ENST00000470161 LTBP3Q9NS15 1303 aa24.41■■□□□ 1.5
PCGF3-208ENST00000470161 RPS8P62241 208 aaKnown RBP24.41■■□□□ 1.5
PCGF3-208ENST00000470161 SP8Q8IXZ3 490 aa24.41■■□□□ 1.5
PCGF3-208ENST00000470161 TTLL11Q8NHH1 800 aa24.41■■□□□ 1.5
PCGF3-208ENST00000470161 BCAR3O75815 825 aa24.4■■□□□ 1.5
PCGF3-208ENST00000470161 ARHGAP45Q92619 1136 aa24.4■■□□□ 1.5
PCGF3-208ENST00000470161 CELF1Q92879 486 aaKnown RBP24.4■■□□□ 1.5
PCGF3-208ENST00000470161 PLA2G12BQ9BX93 195 aa24.4■■□□□ 1.5
PCGF3-208ENST00000470161 CASP7P55210 303 aa24.4■■□□□ 1.5
PCGF3-208ENST00000470161 ZNF784Q8NCA9 323 aaPredicted RBP24.4■■□□□ 1.5
PCGF3-208ENST00000470161 SEC31BQ9NQW1 1179 aa24.4■■□□□ 1.5
PCGF3-208ENST00000470161 CCT4P50991 539 aaKnown RBP24.39■■□□□ 1.49
PCGF3-208ENST00000470161 EXOC6Q8TAG9 804 aa24.39■■□□□ 1.49
PCGF3-208ENST00000470161 CDC5LQ99459 802 aaKnown RBP24.39■■□□□ 1.49
PCGF3-208ENST00000470161 B4GALNT3Q6L9W6 998 aa24.38■■□□□ 1.49
PCGF3-208ENST00000470161 ANKRD18AQ8IVF6 992 aa24.38■■□□□ 1.49
PCGF3-208ENST00000470161 CHMP3Q9Y3E7 222 aa24.38■■□□□ 1.49
PCGF3-208ENST00000470161 DPP8Q6V1X1 898 aaPredicted RBP24.37■■□□□ 1.49
PCGF3-208ENST00000470161 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.37■■□□□ 1.49
PCGF3-208ENST00000470161 PSMD1Q99460 953 aa24.37■■□□□ 1.49
PCGF3-208ENST00000470161 GREM2Q9H772 168 aa24.37■■□□□ 1.49
PCGF3-208ENST00000470161 ZNF277Q9NRM2 450 aaPredicted RBP24.37■■□□□ 1.49
PCGF3-208ENST00000470161 FER1L6Q2WGJ9 1857 aa24.37■■□□□ 1.49
PCGF3-208ENST00000470161 C20orf194Q5TEA3 1177 aa24.37■■□□□ 1.49
PCGF3-208ENST00000470161 MPNDQ8N594 471 aa24.37■■□□□ 1.49
PCGF3-208ENST00000470161 ZNF526Q8TF50 670 aaPredicted RBP24.37■■□□□ 1.49
PCGF3-208ENST00000470161 PRELPP51888 382 aa24.35■■□□□ 1.49
PCGF3-208ENST00000470161 ATF7IPQ6VMQ6 1270 aa24.35■■□□□ 1.49
PCGF3-208ENST00000470161 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
PCGF3-208ENST00000470161 ZC3H4Q9UPT8 1303 aaKnown RBP24.35■■□□□ 1.49
PCGF3-208ENST00000470161 NBPF7P0C2Y1 421 aaPredicted RBP24.34■■□□□ 1.49
PCGF3-208ENST00000470161 CRBNQ96SW2 442 aa24.34■■□□□ 1.49
PCGF3-208ENST00000470161 NSFL1CQ9UNZ2 370 aaKnown RBP24.34■■□□□ 1.49
PCGF3-208ENST00000470161 CSF1RP07333 972 aa24.34■■□□□ 1.49
PCGF3-208ENST00000470161 ITGA6P23229 1130 aa24.34■■□□□ 1.49
PCGF3-208ENST00000470161 IARSP41252 1262 aaKnown RBP24.34■■□□□ 1.49
PCGF3-208ENST00000470161 ZKSCAN2Q63HK3 967 aa24.34■■□□□ 1.49
PCGF3-208ENST00000470161 GPBP1L1Q9HC44 474 aaPredicted RBP24.34■■□□□ 1.49
PCGF3-208ENST00000470161 RTL9Q8NET4 1388 aa24.33■■□□□ 1.49
PCGF3-208ENST00000470161 SBF1O95248 1867 aa24.33■■□□□ 1.49
PCGF3-208ENST00000470161 IGHMBP2P38935 993 aaKnown RBP24.33■■□□□ 1.49
PCGF3-208ENST00000470161 FAM161AQ3B820 660 aa24.33■■□□□ 1.49
PCGF3-208ENST00000470161 LMBR1LQ6UX01 489 aa24.33■■□□□ 1.49
PCGF3-208ENST00000470161 SLC51AQ86UW1 340 aa24.33■■□□□ 1.49
PCGF3-208ENST00000470161 JDP2Q8WYK2 163 aa24.33■■□□□ 1.49
PCGF3-208ENST00000470161 TAF1P21675 1872 aa24.32■■□□□ 1.48
PCGF3-208ENST00000470161 MYH3P11055 1940 aa24.32■■□□□ 1.48
PCGF3-208ENST00000470161 ANKRD18BA2A2Z9 1011 aa24.32■■□□□ 1.48
PCGF3-208ENST00000470161 FOXO4P98177 505 aa24.32■■□□□ 1.48
PCGF3-208ENST00000470161 IFIT5Q13325 482 aaKnown RBP24.32■■□□□ 1.48
PCGF3-208ENST00000470161 MPHOSPH8Q99549 860 aa24.32■■□□□ 1.48
PCGF3-208ENST00000470161 USP44Q9H0E7 712 aa24.32■■□□□ 1.48
PCGF3-208ENST00000470161 UTYO14607 1347 aa24.32■■□□□ 1.48
PCGF3-208ENST00000470161 TRIM27P14373 513 aa24.31■■□□□ 1.48
PCGF3-208ENST00000470161 DPY19L2Q6NUT2 758 aa24.31■■□□□ 1.48
PCGF3-208ENST00000470161 CLUAP1Q96AJ1 413 aa24.31■■□□□ 1.48
PCGF3-208ENST00000470161 ANKIB1Q9P2G1 1089 aa24.31■■□□□ 1.48
PCGF3-208ENST00000470161 CCDC57Q2TAC2 916 aa24.3■■□□□ 1.48
PCGF3-208ENST00000470161 LARGE2Q8N3Y3 721 aa24.3■■□□□ 1.48
PCGF3-208ENST00000470161 SUCLG2Q96I99 432 aa24.3■■□□□ 1.48
PCGF3-208ENST00000470161 KDM2BQ8NHM5 1336 aa24.3■■□□□ 1.48
PCGF3-208ENST00000470161 TAF7LQ5H9L4 462 aa24.3■■□□□ 1.48
PCGF3-208ENST00000470161 BSDC1Q9NW68 430 aaPredicted RBP24.3■■□□□ 1.48
PCGF3-208ENST00000470161 HDAC5Q9UQL6 1122 aa24.3■■□□□ 1.48
PCGF3-208ENST00000470161 SNED1Q8TER0 1413 aa24.29■■□□□ 1.48
PCGF3-208ENST00000470161 CCDC88AQ3V6T2 1871 aa24.29■■□□□ 1.48
PCGF3-208ENST00000470161 C6orf229H3BNL8 230 aa24.29■■□□□ 1.48
PCGF3-208ENST00000470161 PPIP5K2O43314 1243 aa24.29■■□□□ 1.48
PCGF3-208ENST00000470161 EPHA10Q5JZY3 1008 aa24.29■■□□□ 1.48
PCGF3-208ENST00000470161 FTSJ3Q8IY81 847 aaKnown RBP24.29■■□□□ 1.48
PCGF3-208ENST00000470161 CCDC136Q96JN2 1154 aa24.29■■□□□ 1.48
PCGF3-208ENST00000470161 RTFDC1Q9BY42 306 aaPredicted RBP24.29■■□□□ 1.48
PCGF3-208ENST00000470161 VPS33BQ9H267 617 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms