RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-210	ENST00000470086	ADARB2	Q9NS39	739 aa	Known RBP	11.24	□□□□□ -0.61
LSM2-210	ENST00000470086	RNF186	Q9NXI6	227 aa		11.24	□□□□□ -0.61
LSM2-210	ENST00000470086	USP16	Q9Y5T5	823 aa		11.24	□□□□□ -0.61
LSM2-210	ENST00000470086	LAMA3	Q16787	3333 aa		11.24	□□□□□ -0.61
LSM2-210	ENST00000470086	ADM5	C9JUS6	153 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	TCERG1	O14776	1098 aa	Known RBP	11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	TRPA1	O75762	1119 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	HUNK	P57058	714 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	KIF23	Q02241	960 aa	Predicted RBP	11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	NOG	Q13253	232 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	GSE1	Q14687	1217 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	LARGE2	Q8N3Y3	721 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	JDP2	Q8WYK2	163 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	PGAP2	Q9UHJ9	254 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	UBN2	Q6ZU65	1347 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	CEMIP	Q8WUJ3	1361 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	SPEF2	Q9C093	1822 aa		11.23	□□□□□ -0.61
LSM2-210	ENST00000470086	UNC80	Q8N2C7	3258 aa		11.22	□□□□□ -0.61
LSM2-210	ENST00000470086	CXCL9	Q07325	125 aa		11.22	□□□□□ -0.61
LSM2-210	ENST00000470086	DCAF8	Q5TAQ9	597 aa		11.22	□□□□□ -0.61
LSM2-210	ENST00000470086	TTC5	Q8N0Z6	440 aa		11.22	□□□□□ -0.61
LSM2-210	ENST00000470086	MS4A3	Q96HJ5	214 aa		11.22	□□□□□ -0.61
LSM2-210	ENST00000470086	POLR3GL	Q9BT43	218 aa		11.22	□□□□□ -0.61
LSM2-210	ENST00000470086	SAGE1	Q9NXZ1	904 aa		11.22	□□□□□ -0.61
LSM2-210	ENST00000470086	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
LSM2-210	ENST00000470086	OTOF	Q9HC10	1997 aa		11.21	□□□□□ -0.61
LSM2-210	ENST00000470086	ASTN2	O75129	1339 aa	Predicted RBP	11.21	□□□□□ -0.61
LSM2-210	ENST00000470086	YDJC	A8MPS7	323 aa		11.21	□□□□□ -0.61
LSM2-210	ENST00000470086	CTU1	Q7Z7A3	348 aa	Known RBP	11.21	□□□□□ -0.61
LSM2-210	ENST00000470086	PPIP5K2	O43314	1243 aa		11.2	□□□□□ -0.62
LSM2-210	ENST00000470086	CDCA8	Q53HL2	280 aa		11.2	□□□□□ -0.62
LSM2-210	ENST00000470086	USP48	Q86UV5	1035 aa		11.2	□□□□□ -0.62
LSM2-210	ENST00000470086	TRIOBP	Q9H2D6	2365 aa		11.19	□□□□□ -0.62
LSM2-210	ENST00000470086	PPEF1	O14829	653 aa	Predicted RBP	11.19	□□□□□ -0.62
LSM2-210	ENST00000470086	MAP3K13	O43283	966 aa		11.19	□□□□□ -0.62
LSM2-210	ENST00000470086	SLC10A3	P09131	477 aa		11.19	□□□□□ -0.62
LSM2-210	ENST00000470086	RGMB	Q6NW40	437 aa		11.19	□□□□□ -0.62
LSM2-210	ENST00000470086	NIM1K	Q8IY84	436 aa		11.19	□□□□□ -0.62
LSM2-210	ENST00000470086	CSRNP1	Q96S65	589 aa		11.19	□□□□□ -0.62
LSM2-210	ENST00000470086	PANK3	Q9H999	370 aa		11.19	□□□□□ -0.62
LSM2-210	ENST00000470086	POTEF	A5A3E0	1075 aa		11.18	□□□□□ -0.62
LSM2-210	ENST00000470086	RAD17	O75943	681 aa		11.18	□□□□□ -0.62
LSM2-210	ENST00000470086	RASAL3	Q86YV0	1011 aa		11.18	□□□□□ -0.62
LSM2-210	ENST00000470086	FMNL2	Q96PY5	1086 aa		11.18	□□□□□ -0.62
LSM2-210	ENST00000470086		A0A0C4DFX4	3053 aa		11.17	□□□□□ -0.62
LSM2-210	ENST00000470086	ALDH1B1	P30837	517 aa		11.17	□□□□□ -0.62
LSM2-210	ENST00000470086	CLEC4G	Q6UXB4	293 aa		11.17	□□□□□ -0.62
LSM2-210	ENST00000470086	SAMD7	Q7Z3H4	446 aa		11.17	□□□□□ -0.62
LSM2-210	ENST00000470086	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.17	□□□□□ -0.62
LSM2-210	ENST00000470086	R3HDML	Q9H3Y0	253 aa		11.17	□□□□□ -0.62
LSM2-210	ENST00000470086	GBA2	Q9HCG7	927 aa	Predicted RBP	11.17	□□□□□ -0.62
LSM2-210	ENST00000470086	KIAA0100	Q14667	2235 aa	Known RBP	11.17	□□□□□ -0.62
LSM2-210	ENST00000470086	ECM29	Q5VYK3	1845 aa		11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	ABCC4	O15439	1325 aa		11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	KIF7	Q2M1P5	1343 aa		11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	HOXA10	P31260	410 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	MORC1	Q86VD1	984 aa		11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	MICALL2	Q8IY33	904 aa		11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	EYS	Q5T1H1	3165 aa		11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	CEP290	O15078	2479 aa		11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	RTL9	Q8NET4	1388 aa		11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-210	ENST00000470086	ALPK3	Q96L96	1907 aa		11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	CDHR2	Q9BYE9	1310 aa		11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	NTSR2	O95665	410 aa		11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	CHRM1	P11229	460 aa	Predicted RBP	11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	TEF	Q10587	303 aa		11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	TPTE2	Q6XPS3	522 aa		11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	TTLL7	Q6ZT98	887 aa		11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	MOB2	Q70IA6	237 aa		11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	CDC37L1	Q7L3B6	337 aa		11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	SCAF8	Q9UPN6	1271 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-210	ENST00000470086	VCAN	P13611	3396 aa		11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	TBC1D8	O95759	1140 aa		11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	GPT	P24298	496 aa		11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	ZNF157	P51786	506 aa	Predicted RBP	11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	CAP1	Q01518	475 aa		11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	SUSD4	Q5VX71	490 aa		11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	DCBLD2	Q96PD2	775 aa		11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	ZNRF3	Q9ULT6	936 aa		11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	ZNF652	Q9Y2D9	606 aa		11.14	□□□□□ -0.63
LSM2-210	ENST00000470086	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.13	□□□□□ -0.63
LSM2-210	ENST00000470086	RPGR	Q92834	1020 aa	Known RBP	11.13	□□□□□ -0.63
LSM2-210	ENST00000470086	PHACTR3	Q96KR7	559 aa		11.13	□□□□□ -0.63
LSM2-210	ENST00000470086	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.13	□□□□□ -0.63
LSM2-210	ENST00000470086	KCNQ5	Q9NR82	932 aa		11.13	□□□□□ -0.63
LSM2-210	ENST00000470086	CNOT7	Q9UIV1	285 aa	Known RBP	11.13	□□□□□ -0.63
LSM2-210	ENST00000470086	BTBD11	A6QL63	1104 aa		11.12	□□□□□ -0.63
LSM2-210	ENST00000470086	GNAT3	A8MTJ3	354 aa		11.12	□□□□□ -0.63
LSM2-210	ENST00000470086	PYGB	P11216	843 aa		11.12	□□□□□ -0.63
LSM2-210	ENST00000470086	KIAA2012	Q0VF49	1180 aa		11.12	□□□□□ -0.63
LSM2-210	ENST00000470086	KRT26	Q7Z3Y9	468 aa		11.12	□□□□□ -0.63
LSM2-210	ENST00000470086	ZC3H15	Q8WU90	426 aa	Known RBP	11.12	□□□□□ -0.63
LSM2-210	ENST00000470086	GCC1	Q96CN9	775 aa		11.12	□□□□□ -0.63
LSM2-210	ENST00000470086	GGA3	Q9NZ52	723 aa		11.12	□□□□□ -0.63
LSM2-210	ENST00000470086	COLQ	Q9Y215	455 aa	Predicted RBP	11.12	□□□□□ -0.63
LSM2-210	ENST00000470086	PCDHB13	Q9Y5F0	798 aa		11.12	□□□□□ -0.63

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