RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 GRAPQ13588 217 aa14.89□□□□□ -0.03
MCF2L-222ENST00000469558 GRAPLQ8TC17 118 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-222ENST00000469558 CELF1Q92879 486 aaKnown RBP14.89□□□□□ -0.03
MCF2L-222ENST00000469558 ATP6V0A2Q9Y487 856 aa14.89□□□□□ -0.03
MCF2L-222ENST00000469558 PDE8AO60658 829 aa14.88□□□□□ -0.03
MCF2L-222ENST00000469558 NEXNQ0ZGT2 675 aa14.88□□□□□ -0.03
MCF2L-222ENST00000469558 ALDH1L2Q3SY69 923 aa14.88□□□□□ -0.03
MCF2L-222ENST00000469558 UBE3BQ7Z3V4 1068 aa14.88□□□□□ -0.03
MCF2L-222ENST00000469558 PSMD1Q99460 953 aa14.88□□□□□ -0.03
MCF2L-222ENST00000469558 SEC31BQ9NQW1 1179 aa14.88□□□□□ -0.03
MCF2L-222ENST00000469558 ZC3H4Q9UPT8 1303 aaKnown RBP14.88□□□□□ -0.03
MCF2L-222ENST00000469558 CT47B1P0C2W7 299 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-222ENST00000469558 RTKN2Q8IZC4 609 aa14.87□□□□□ -0.03
MCF2L-222ENST00000469558 ZNF526Q8TF50 670 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-222ENST00000469558 ZNF277Q9NRM2 450 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-222ENST00000469558 ZBED9Q6R2W3 1325 aa14.87□□□□□ -0.03
MCF2L-222ENST00000469558 RTL9Q8NET4 1388 aa14.86□□□□□ -0.03
MCF2L-222ENST00000469558 KIF3CO14782 793 aa14.86□□□□□ -0.03
MCF2L-222ENST00000469558 BBOX1O75936 387 aa14.86□□□□□ -0.03
MCF2L-222ENST00000469558 RARSP54136 660 aaKnown RBP14.86□□□□□ -0.03
MCF2L-222ENST00000469558 BRPF1P55201 1214 aaPredicted RBP14.86□□□□□ -0.03
MCF2L-222ENST00000469558 CTSWP56202 376 aa14.86□□□□□ -0.03
MCF2L-222ENST00000469558 CC2D2BQ6DHV5 1058 aa14.86□□□□□ -0.03
MCF2L-222ENST00000469558 DDX46Q7L014 1031 aaKnown RBP14.86□□□□□ -0.03
MCF2L-222ENST00000469558 SP8Q8IXZ3 490 aa14.86□□□□□ -0.03
MCF2L-222ENST00000469558 TTLL11Q8NHH1 800 aa14.86□□□□□ -0.03
MCF2L-222ENST00000469558 PLA2G12BQ9BX93 195 aa14.86□□□□□ -0.03
MCF2L-222ENST00000469558 SPEF2Q9C093 1822 aa14.86□□□□□ -0.03
MCF2L-222ENST00000469558 CCDC85AQ96PX6 553 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-222ENST00000469558 RTFDC1Q9BY42 306 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-222ENST00000469558 NMRK2Q9NPI5 230 aa14.85□□□□□ -0.03
MCF2L-222ENST00000469558 WDR90Q96KV7 1748 aa14.85□□□□□ -0.03
MCF2L-222ENST00000469558 PTPRCP08575 1304 aa14.85□□□□□ -0.03
MCF2L-222ENST00000469558 CSF1RP07333 972 aa14.84□□□□□ -0.03
MCF2L-222ENST00000469558 FOXO4P98177 505 aa14.84□□□□□ -0.03
MCF2L-222ENST00000469558 EPHA10Q5JZY3 1008 aa14.84□□□□□ -0.03
MCF2L-222ENST00000469558 KAZALD1Q96I82 304 aa14.84□□□□□ -0.03
MCF2L-222ENST00000469558 GREM2Q9H772 168 aa14.84□□□□□ -0.03
MCF2L-222ENST00000469558 GPBP1L1Q9HC44 474 aaPredicted RBP14.84□□□□□ -0.03
MCF2L-222ENST00000469558 SMC4Q9NTJ3 1288 aa14.84□□□□□ -0.03
MCF2L-222ENST00000469558 ZNF541Q9H0D2 1346 aa14.84□□□□□ -0.03
MCF2L-222ENST00000469558 POTECB2RU33 542 aa14.83□□□□□ -0.04
MCF2L-222ENST00000469558 ALDH1L1O75891 902 aa14.83□□□□□ -0.04
MCF2L-222ENST00000469558 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.04
MCF2L-222ENST00000469558 CCDC152Q4G0S7 254 aa14.83□□□□□ -0.04
MCF2L-222ENST00000469558 UTYO14607 1347 aa14.83□□□□□ -0.04
MCF2L-222ENST00000469558 A0A1B0GUL6 1792 aa14.83□□□□□ -0.04
MCF2L-222ENST00000469558 GLTPD2A6NH11 291 aa14.82□□□□□ -0.04
MCF2L-222ENST00000469558 GRM8O00222 908 aa14.82□□□□□ -0.04
MCF2L-222ENST00000469558 RPS8P62241 208 aaKnown RBP14.82□□□□□ -0.04
MCF2L-222ENST00000469558 GRIPAP1Q4V328 841 aa14.82□□□□□ -0.04
MCF2L-222ENST00000469558 SLC4A10Q6U841 1118 aa14.82□□□□□ -0.04
MCF2L-222ENST00000469558 TMC4Q7Z404 712 aa14.82□□□□□ -0.04
MCF2L-222ENST00000469558 SRCIN1Q9C0H9 1055 aa14.82□□□□□ -0.04
MCF2L-222ENST00000469558 FZD9O00144 591 aa14.81□□□□□ -0.04
MCF2L-222ENST00000469558 NBPF7P0C2Y1 421 aaPredicted RBP14.81□□□□□ -0.04
MCF2L-222ENST00000469558 HSP90B1P14625 803 aaKnown RBP14.81□□□□□ -0.04
MCF2L-222ENST00000469558 GPSM2P81274 684 aa14.81□□□□□ -0.04
MCF2L-222ENST00000469558 FAM161AQ3B820 660 aa14.81□□□□□ -0.04
MCF2L-222ENST00000469558 NOB1Q9ULX3 412 aaKnown RBP14.81□□□□□ -0.04
MCF2L-222ENST00000469558 AOC3Q16853 763 aa14.8□□□□□ -0.04
MCF2L-222ENST00000469558 MPNDQ8N594 471 aa14.8□□□□□ -0.04
MCF2L-222ENST00000469558 POLLQ9UGP5 575 aa14.8□□□□□ -0.04
MCF2L-222ENST00000469558 TNNQ9UQP3 1299 aa14.8□□□□□ -0.04
MCF2L-222ENST00000469558 WTIPA6NIX2 430 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-222ENST00000469558 BCAR3O75815 825 aa14.79□□□□□ -0.04
MCF2L-222ENST00000469558 DPP8Q6V1X1 898 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-222ENST00000469558 SUCLG2Q96I99 432 aa14.79□□□□□ -0.04
MCF2L-222ENST00000469558 USP44Q9H0E7 712 aa14.79□□□□□ -0.04
MCF2L-222ENST00000469558 KDM2BQ8NHM5 1336 aa14.78□□□□□ -0.04
MCF2L-222ENST00000469558 DDNO94850 711 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-222ENST00000469558 ITGA6P23229 1130 aa14.78□□□□□ -0.04
MCF2L-222ENST00000469558 KIAA2012Q0VF49 1180 aa14.78□□□□□ -0.04
MCF2L-222ENST00000469558 GPR101Q96P66 508 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-222ENST00000469558 PODXL2Q9NZ53 605 aa14.78□□□□□ -0.04
MCF2L-222ENST00000469558 PPIP5K2O43314 1243 aa14.77□□□□□ -0.05
MCF2L-222ENST00000469558 C1QTNF8P60827 252 aa14.77□□□□□ -0.05
MCF2L-222ENST00000469558 ANKRD18AQ8IVF6 992 aa14.77□□□□□ -0.05
MCF2L-222ENST00000469558 LARGE2Q8N3Y3 721 aa14.77□□□□□ -0.05
MCF2L-222ENST00000469558 ANKRD44Q8N8A2 993 aa14.77□□□□□ -0.05
MCF2L-222ENST00000469558 TBC1D16Q8TBP0 767 aa14.77□□□□□ -0.05
MCF2L-222ENST00000469558 L3MBTL3Q96JM7 780 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-222ENST00000469558 VPS33BQ9H267 617 aa14.77□□□□□ -0.05
MCF2L-222ENST00000469558 RRAGCQ9HB90 399 aa14.77□□□□□ -0.05
MCF2L-222ENST00000469558 BSDC1Q9NW68 430 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-222ENST00000469558 ZNF646O15015 1829 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-222ENST00000469558 ADAMTSL1Q8N6G6 1762 aa14.77□□□□□ -0.05
MCF2L-222ENST00000469558 SCN9AQ15858 1988 aa14.76□□□□□ -0.05
MCF2L-222ENST00000469558 KIF16BQ96L93 1317 aa14.76□□□□□ -0.05
MCF2L-222ENST00000469558 YDJCA8MPS7 323 aa14.76□□□□□ -0.05
MCF2L-222ENST00000469558 RABL6Q3YEC7 729 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-222ENST00000469558 LMBR1LQ6UX01 489 aa14.76□□□□□ -0.05
MCF2L-222ENST00000469558 ARHGAP45Q92619 1136 aa14.76□□□□□ -0.05
MCF2L-222ENST00000469558 CDC5LQ99459 802 aaKnown RBP14.76□□□□□ -0.05
MCF2L-222ENST00000469558 C9orf78Q9NZ63 289 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-222ENST00000469558 MINPP1Q9UNW1 487 aa14.76□□□□□ -0.05
MCF2L-222ENST00000469558 NSFL1CQ9UNZ2 370 aaKnown RBP14.76□□□□□ -0.05
MCF2L-222ENST00000469558 TRIM27P14373 513 aa14.75□□□□□ -0.05
MCF2L-222ENST00000469558 SUPT20HQ8NEM7 779 aa14.75□□□□□ -0.05
MCF2L-222ENST00000469558 BICC1Q9H694 974 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms