RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 SMIM5Q71RC9 77 aa18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 ATG9AQ7Z3C6 839 aa18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 AMIGO3Q86WK7 504 aa18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 BCL11AQ9H165 835 aa18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 GPR108Q9NPR9 543 aa18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 SDSP20132 328 aa18.42■□□□□ 0.54
CRAMP1-206ENST00000468839 RFC4P35249 363 aa18.42■□□□□ 0.54
CRAMP1-206ENST00000468839 SLC10A5Q5PT55 438 aa18.42■□□□□ 0.54
CRAMP1-206ENST00000468839 TBC1D9BQ66K14 1250 aa18.42■□□□□ 0.54
CRAMP1-206ENST00000468839 EAF2Q96CJ1 260 aaPredicted RBP18.42■□□□□ 0.54
CRAMP1-206ENST00000468839 SPEF2Q9C093 1822 aa18.42■□□□□ 0.54
CRAMP1-206ENST00000468839 RTL9Q8NET4 1388 aa18.42■□□□□ 0.54
CRAMP1-206ENST00000468839 CDC45O75419 566 aa18.41■□□□□ 0.54
CRAMP1-206ENST00000468839 SEC24BO95487 1268 aa18.41■□□□□ 0.54
CRAMP1-206ENST00000468839 IFIT2P09913 472 aaKnown RBP18.41■□□□□ 0.54
CRAMP1-206ENST00000468839 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
CRAMP1-206ENST00000468839 NYXQ9GZU5 481 aa18.41■□□□□ 0.54
CRAMP1-206ENST00000468839 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
CRAMP1-206ENST00000468839 ANKRD18BA2A2Z9 1011 aa18.4■□□□□ 0.54
CRAMP1-206ENST00000468839 EIF5BO60841 1220 aaKnown RBP18.4■□□□□ 0.54
CRAMP1-206ENST00000468839 ITGA6P23229 1130 aa18.4■□□□□ 0.54
CRAMP1-206ENST00000468839 TFCP2Q12800 502 aa18.4■□□□□ 0.54
CRAMP1-206ENST00000468839 AACSQ86V21 672 aa18.4■□□□□ 0.54
CRAMP1-206ENST00000468839 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
CRAMP1-206ENST00000468839 ZNF594Q96JF6 807 aaPredicted RBP18.4■□□□□ 0.54
CRAMP1-206ENST00000468839 SETDB2Q96T68 719 aa18.4■□□□□ 0.54
CRAMP1-206ENST00000468839 GREM2Q9H772 168 aa18.4■□□□□ 0.54
CRAMP1-206ENST00000468839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.39■□□□□ 0.53
CRAMP1-206ENST00000468839 FAM177BA6PVY3 158 aa18.39■□□□□ 0.53
CRAMP1-206ENST00000468839 ERC2O15083 957 aa18.39■□□□□ 0.53
CRAMP1-206ENST00000468839 GLRX3O76003 335 aaKnown RBP18.39■□□□□ 0.53
CRAMP1-206ENST00000468839 HCLS1P14317 486 aaPredicted RBP18.39■□□□□ 0.53
CRAMP1-206ENST00000468839 TNNI3KQ59H18 835 aa18.39■□□□□ 0.53
CRAMP1-206ENST00000468839 ECHDC1Q9NTX5 307 aa18.39■□□□□ 0.53
CRAMP1-206ENST00000468839 FPGT-TNNI3KV9GXZ4 949 aa18.39■□□□□ 0.53
CRAMP1-206ENST00000468839 LRP5O75197 1615 aa18.38■□□□□ 0.53
CRAMP1-206ENST00000468839 QSER1Q2KHR3 1735 aa18.38■□□□□ 0.53
CRAMP1-206ENST00000468839 LRRC24Q50LG9 513 aa18.38■□□□□ 0.53
CRAMP1-206ENST00000468839 TAF7LQ5H9L4 462 aa18.38■□□□□ 0.53
CRAMP1-206ENST00000468839 TBC1D9Q6ZT07 1266 aa18.38■□□□□ 0.53
CRAMP1-206ENST00000468839 PUS3Q9BZE2 481 aaKnown RBP18.38■□□□□ 0.53
CRAMP1-206ENST00000468839 TAF1P21675 1872 aa18.37■□□□□ 0.53
CRAMP1-206ENST00000468839 PHF14O94880 888 aa18.37■□□□□ 0.53
CRAMP1-206ENST00000468839 SF3B3Q15393 1217 aaKnown RBP18.37■□□□□ 0.53
CRAMP1-206ENST00000468839 ERFEQ4G0M1 354 aa18.37■□□□□ 0.53
CRAMP1-206ENST00000468839 CCDC152Q4G0S7 254 aa18.37■□□□□ 0.53
CRAMP1-206ENST00000468839 TSHZ3Q63HK5 1081 aa18.37■□□□□ 0.53
CRAMP1-206ENST00000468839 AKT1S1Q96B36 256 aa18.37■□□□□ 0.53
CRAMP1-206ENST00000468839 CCDC8Q9H0W5 538 aaPredicted RBP18.37■□□□□ 0.53
CRAMP1-206ENST00000468839 RIPOR2Q9Y4F9 1068 aa18.37■□□□□ 0.53
CRAMP1-206ENST00000468839 A0A1B0GUL6 1792 aa18.36■□□□□ 0.53
CRAMP1-206ENST00000468839 TPTE2Q6XPS3 522 aa18.36■□□□□ 0.53
CRAMP1-206ENST00000468839 BICDL1Q6ZP65 573 aa18.36■□□□□ 0.53
CRAMP1-206ENST00000468839 CCDC85AQ96PX6 553 aaPredicted RBP18.36■□□□□ 0.53
CRAMP1-206ENST00000468839 UPF2Q9HAU5 1272 aaKnown RBP18.36■□□□□ 0.53
CRAMP1-206ENST00000468839 CEP126Q9P2H0 1117 aa18.36■□□□□ 0.53
CRAMP1-206ENST00000468839 ARAP2Q8WZ64 1704 aa18.35■□□□□ 0.53
CRAMP1-206ENST00000468839 ZNF609O15014 1411 aa18.34■□□□□ 0.53
CRAMP1-206ENST00000468839 CARMIL3Q8ND23 1372 aa18.34■□□□□ 0.53
CRAMP1-206ENST00000468839 GYS1P13807 737 aa18.34■□□□□ 0.53
CRAMP1-206ENST00000468839 LDHAL6AQ6ZMR3 332 aa18.34■□□□□ 0.53
CRAMP1-206ENST00000468839 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
CRAMP1-206ENST00000468839 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
CRAMP1-206ENST00000468839 AKAP2Q9Y2D5 859 aa18.34■□□□□ 0.53
CRAMP1-206ENST00000468839 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 ATP5JP18859 108 aa18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 GTF2E1P29083 439 aaPredicted RBP18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 TM4SF1P30408 202 aa18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 NFIXQ14938 502 aa18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 CASC1Q6TDU7 716 aa18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 CNTROBQ8N137 903 aa18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 DBNLQ9UJU6 430 aaKnown RBP18.33■□□□□ 0.52
CRAMP1-206ENST00000468839 RIC1Q4ADV7 1423 aa18.32■□□□□ 0.52
CRAMP1-206ENST00000468839 ZNF827Q17R98 1081 aa18.32■□□□□ 0.52
CRAMP1-206ENST00000468839 RILPL2Q969X0 211 aa18.32■□□□□ 0.52
CRAMP1-206ENST00000468839 TBC1D32Q96NH3 1257 aa18.32■□□□□ 0.52
CRAMP1-206ENST00000468839 CNNM1Q9NRU3 951 aa18.32■□□□□ 0.52
CRAMP1-206ENST00000468839 ABCC12Q96J65 1359 aa18.31■□□□□ 0.52
CRAMP1-206ENST00000468839 AKAP11Q9UKA4 1901 aa18.31■□□□□ 0.52
CRAMP1-206ENST00000468839 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
CRAMP1-206ENST00000468839 NLRP3Q96P20 1036 aa18.31■□□□□ 0.52
CRAMP1-206ENST00000468839 CAMKK2Q96RR4 588 aa18.31■□□□□ 0.52
CRAMP1-206ENST00000468839 DBNDD2Q9BQY9 259 aa18.31■□□□□ 0.52
CRAMP1-206ENST00000468839 NRXN2Q9P2S2 1712 aa18.31■□□□□ 0.52
CRAMP1-206ENST00000468839 MROH5Q6ZUA9 1318 aa18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 A0A1B0GUL7 405 aa18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 CHMLP26374 656 aa18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 TIMM10P62072 90 aa18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 VGLL2Q8N8G2 317 aa18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 SEC31BQ9NQW1 1179 aa18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 TNRC6CQ9HCJ0 1690 aaKnown RBP18.3■□□□□ 0.52
CRAMP1-206ENST00000468839 MYH7P12883 1935 aa18.29■□□□□ 0.52
CRAMP1-206ENST00000468839 IGHMBP2P38935 993 aaKnown RBP18.29■□□□□ 0.52
CRAMP1-206ENST00000468839 EVI5LQ96CN4 794 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms