RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 EPS15P42566 896 aa19.12■□□□□ 0.65
ATPAF2-204ENST00000467560 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
ATPAF2-204ENST00000467560 IFFO2Q5TF58 517 aa19.12■□□□□ 0.65
ATPAF2-204ENST00000467560 MAP1SQ66K74 1059 aaPredicted RBP19.12■□□□□ 0.65
ATPAF2-204ENST00000467560 DPP8Q6V1X1 898 aaPredicted RBP19.12■□□□□ 0.65
ATPAF2-204ENST00000467560 RIC3Q7Z5B4 369 aa19.12■□□□□ 0.65
ATPAF2-204ENST00000467560 JARID2Q92833 1246 aaPredicted RBP19.12■□□□□ 0.65
ATPAF2-204ENST00000467560 WWC1Q8IX03 1113 aa19.11■□□□□ 0.65
ATPAF2-204ENST00000467560 NIM1KQ8IY84 436 aa19.11■□□□□ 0.65
ATPAF2-204ENST00000467560 MPNDQ8N594 471 aa19.11■□□□□ 0.65
ATPAF2-204ENST00000467560 MYD88Q99836 296 aa19.11■□□□□ 0.65
ATPAF2-204ENST00000467560 CREBZFQ9NS37 354 aa19.11■□□□□ 0.65
ATPAF2-204ENST00000467560 CLEC11AQ9Y240 323 aa19.11■□□□□ 0.65
ATPAF2-204ENST00000467560 ZNF316A6NFI3 1004 aaPredicted RBP19.1■□□□□ 0.65
ATPAF2-204ENST00000467560 IRS4O14654 1257 aaPredicted RBP19.1■□□□□ 0.65
ATPAF2-204ENST00000467560 CXCL9Q07325 125 aa19.1■□□□□ 0.65
ATPAF2-204ENST00000467560 GOLGA2Q08379 1002 aa19.1■□□□□ 0.65
ATPAF2-204ENST00000467560 MKRN1Q9UHC7 482 aaKnown RBP19.1■□□□□ 0.65
ATPAF2-204ENST00000467560 KIAA2012Q0VF49 1180 aa19.09■□□□□ 0.65
ATPAF2-204ENST00000467560 CCDC27Q2M243 656 aa19.09■□□□□ 0.65
ATPAF2-204ENST00000467560 PNMA8AQ86V59 439 aaPredicted RBP19.09■□□□□ 0.65
ATPAF2-204ENST00000467560 TMX4Q9H1E5 349 aaPredicted RBP19.09■□□□□ 0.65
ATPAF2-204ENST00000467560 MRS2Q9HD23 443 aa19.09■□□□□ 0.65
ATPAF2-204ENST00000467560 ZNRF3Q9ULT6 936 aa19.09■□□□□ 0.65
ATPAF2-204ENST00000467560 FMR1Q06787 632 aaKnown RBP eCLIP19.08■□□□□ 0.64
ATPAF2-204ENST00000467560 CNTROBQ8N137 903 aa19.08■□□□□ 0.64
ATPAF2-204ENST00000467560 ZBTB38Q8NAP3 1195 aaPredicted RBP19.08■□□□□ 0.64
ATPAF2-204ENST00000467560 VPS33BQ9H267 617 aa19.08■□□□□ 0.64
ATPAF2-204ENST00000467560 LRRC37AA6NMS7 1700 aa19.08■□□□□ 0.64
ATPAF2-204ENST00000467560 YDJCA8MPS7 323 aa19.07■□□□□ 0.64
ATPAF2-204ENST00000467560 GPSM2P81274 684 aa19.07■□□□□ 0.64
ATPAF2-204ENST00000467560 CCDC30Q5VVM6 783 aa19.07■□□□□ 0.64
ATPAF2-204ENST00000467560 G2E3Q7L622 706 aa19.07■□□□□ 0.64
ATPAF2-204ENST00000467560 SUPT20HQ8NEM7 779 aa19.07■□□□□ 0.64
ATPAF2-204ENST00000467560 SEC31BQ9NQW1 1179 aa19.07■□□□□ 0.64
ATPAF2-204ENST00000467560 COL13A1Q5TAT6 717 aaPredicted RBP19.06■□□□□ 0.64
ATPAF2-204ENST00000467560 GPR101Q96P66 508 aaPredicted RBP19.06■□□□□ 0.64
ATPAF2-204ENST00000467560 METTL22Q9BUU2 404 aaPredicted RBP19.06■□□□□ 0.64
ATPAF2-204ENST00000467560 POLLQ9UGP5 575 aa19.06■□□□□ 0.64
ATPAF2-204ENST00000467560 MAP3K2Q9Y2U5 619 aa19.06■□□□□ 0.64
ATPAF2-204ENST00000467560 RAD17O75943 681 aa19.05■□□□□ 0.64
ATPAF2-204ENST00000467560 IGKV5-2P06315 115 aa19.05■□□□□ 0.64
ATPAF2-204ENST00000467560 LMOD1P29536 600 aaPredicted RBP19.05■□□□□ 0.64
ATPAF2-204ENST00000467560 GMPSP49915 693 aaPredicted RBP19.05■□□□□ 0.64
ATPAF2-204ENST00000467560 TMC4Q7Z404 712 aa19.05■□□□□ 0.64
ATPAF2-204ENST00000467560 CCDC191Q8NCU4 936 aa19.05■□□□□ 0.64
ATPAF2-204ENST00000467560 GPRC5DQ9NZD1 345 aa19.05■□□□□ 0.64
ATPAF2-204ENST00000467560 NSFL1CQ9UNZ2 370 aaKnown RBP19.05■□□□□ 0.64
ATPAF2-204ENST00000467560 SALL2Q9Y467 1007 aaPredicted RBP19.05■□□□□ 0.64
ATPAF2-204ENST00000467560 SHTN1A0MZ66 631 aa19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 PI4KAP2A4QPH2 592 aa19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 TMEM88BA6NKF7 163 aa19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 PCCAP05165 728 aaPredicted RBP19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 HSPA1AP0DMV8 641 aaKnown RBP19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 HSPA1BP0DMV9 641 aaKnown RBP19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 TWISTNBQ3B726 338 aaPredicted RBP19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 PI4KAP1Q8N8J0 262 aa19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 CCDC85AQ96PX6 553 aaPredicted RBP19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 CWC25Q9NXE8 425 aaPredicted RBP19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 CNTNAP1P78357 1384 aa19.04■□□□□ 0.64
ATPAF2-204ENST00000467560 ANP32CO43423 234 aa19.03■□□□□ 0.64
ATPAF2-204ENST00000467560 RPS8P62241 208 aaKnown RBP19.03■□□□□ 0.64
ATPAF2-204ENST00000467560 KSR2Q6VAB6 950 aa19.03■□□□□ 0.64
ATPAF2-204ENST00000467560 FANCIQ9NVI1 1328 aa19.02■□□□□ 0.64
ATPAF2-204ENST00000467560 TRAF5O00463 557 aa19.02■□□□□ 0.64
ATPAF2-204ENST00000467560 RIMBP2O15034 1052 aa19.02■□□□□ 0.64
ATPAF2-204ENST00000467560 CIAPIN1Q6FI81 312 aa19.02■□□□□ 0.64
ATPAF2-204ENST00000467560 USP50Q70EL3 339 aaPredicted RBP19.02■□□□□ 0.64
ATPAF2-204ENST00000467560 DBNDD1Q9H9R9 158 aa19.02■□□□□ 0.64
ATPAF2-204ENST00000467560 SPINK5Q9NQ38 1064 aaPredicted RBP19.02■□□□□ 0.64
ATPAF2-204ENST00000467560 KCNQ5Q9NR82 932 aa19.02■□□□□ 0.64
ATPAF2-204ENST00000467560 IL16Q14005 1332 aa19.01■□□□□ 0.63
ATPAF2-204ENST00000467560 DDX58O95786 925 aaKnown RBP19.01■□□□□ 0.63
ATPAF2-204ENST00000467560 VEGFBP49765 207 aa19.01■□□□□ 0.63
ATPAF2-204ENST00000467560 HIRAP54198 1017 aaPredicted RBP19.01■□□□□ 0.63
ATPAF2-204ENST00000467560 WASHC4Q2M389 1173 aa19.01■□□□□ 0.63
ATPAF2-204ENST00000467560 CWF19L2Q2TBE0 894 aaKnown RBP19.01■□□□□ 0.63
ATPAF2-204ENST00000467560 TBC1D16Q8TBP0 767 aa19.01■□□□□ 0.63
ATPAF2-204ENST00000467560 ADARB2Q9NS39 739 aaKnown RBP19.01■□□□□ 0.63
ATPAF2-204ENST00000467560 C6orf229H3BNL8 230 aa19■□□□□ 0.63
ATPAF2-204ENST00000467560 SLC4A2P04920 1241 aa19■□□□□ 0.63
ATPAF2-204ENST00000467560 DOK7Q18PE1 504 aa19■□□□□ 0.63
ATPAF2-204ENST00000467560 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
ATPAF2-204ENST00000467560 ZBTB12Q9Y330 459 aaPredicted RBP19■□□□□ 0.63
ATPAF2-204ENST00000467560 RTL9Q8NET4 1388 aa18.99■□□□□ 0.63
ATPAF2-204ENST00000467560 WTIPA6NIX2 430 aaPredicted RBP18.99■□□□□ 0.63
ATPAF2-204ENST00000467560 PDE8AO60658 829 aa18.99■□□□□ 0.63
ATPAF2-204ENST00000467560 TRPM4Q8TD43 1214 aa18.99■□□□□ 0.63
ATPAF2-204ENST00000467560 STK31Q9BXU1 1019 aa18.99■□□□□ 0.63
ATPAF2-204ENST00000467560 PSMD14O00487 310 aa18.98■□□□□ 0.63
ATPAF2-204ENST00000467560 TNIP1Q15025 636 aa18.98■□□□□ 0.63
ATPAF2-204ENST00000467560 CCDC152Q4G0S7 254 aa18.98■□□□□ 0.63
ATPAF2-204ENST00000467560 CST9Q5W186 159 aa18.98■□□□□ 0.63
ATPAF2-204ENST00000467560 BCL2L13Q9BXK5 485 aa18.98■□□□□ 0.63
ATPAF2-204ENST00000467560 CDHR2Q9BYE9 1310 aa18.98■□□□□ 0.63
ATPAF2-204ENST00000467560 RASSF10A6NK89 507 aa18.97■□□□□ 0.63
ATPAF2-204ENST00000467560 NEURL1BA8MQ27 555 aa18.97■□□□□ 0.63
ATPAF2-204ENST00000467560 VAMP4O75379 141 aa18.97■□□□□ 0.63
ATPAF2-204ENST00000467560 EXOSC9Q06265 439 aaKnown RBP18.97■□□□□ 0.63
ATPAF2-204ENST00000467560 CHMP4AQ9BY43 222 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms