RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 GRIPAP1Q4V328 841 aa26.87■■□□□ 1.89
COL6A1-203ENST00000466285 DPP8Q6V1X1 898 aaPredicted RBP26.87■■□□□ 1.89
COL6A1-203ENST00000466285 PLBD2Q8NHP8 589 aa26.87■■□□□ 1.89
COL6A1-203ENST00000466285 GRAPLQ8TC17 118 aaPredicted RBP26.87■■□□□ 1.89
COL6A1-203ENST00000466285 FAM89AQ96GI7 184 aa26.87■■□□□ 1.89
COL6A1-203ENST00000466285 RASSF10A6NK89 507 aa26.86■■□□□ 1.89
COL6A1-203ENST00000466285 YDJCA8MPS7 323 aa26.86■■□□□ 1.89
COL6A1-203ENST00000466285 ZNF853P0CG23 659 aa26.86■■□□□ 1.89
COL6A1-203ENST00000466285 GMPSP49915 693 aaPredicted RBP26.86■■□□□ 1.89
COL6A1-203ENST00000466285 SP8Q8IXZ3 490 aa26.86■■□□□ 1.89
COL6A1-203ENST00000466285 CELF1Q92879 486 aaKnown RBP26.86■■□□□ 1.89
COL6A1-203ENST00000466285 CFAP44Q96MT7 982 aa26.86■■□□□ 1.89
COL6A1-203ENST00000466285 SCN9AQ15858 1988 aa26.86■■□□□ 1.89
COL6A1-203ENST00000466285 APAF1O14727 1248 aa26.85■■□□□ 1.89
COL6A1-203ENST00000466285 HOXB7P09629 217 aa26.85■■□□□ 1.89
COL6A1-203ENST00000466285 MPNDQ8N594 471 aa26.85■■□□□ 1.89
COL6A1-203ENST00000466285 GPRC5DQ9NZD1 345 aa26.85■■□□□ 1.89
COL6A1-203ENST00000466285 RAD17O75943 681 aa26.84■■□□□ 1.89
COL6A1-203ENST00000466285 KIAA2012Q0VF49 1180 aa26.84■■□□□ 1.89
COL6A1-203ENST00000466285 ANKRD13DQ6ZTN6 518 aa26.84■■□□□ 1.89
COL6A1-203ENST00000466285 DDX46Q7L014 1031 aaKnown RBP26.84■■□□□ 1.89
COL6A1-203ENST00000466285 DBF4Q9UBU7 674 aaPredicted RBP26.84■■□□□ 1.89
COL6A1-203ENST00000466285 ZNRF3Q9ULT6 936 aa26.84■■□□□ 1.89
COL6A1-203ENST00000466285 BBOX1O75936 387 aa26.83■■□□□ 1.89
COL6A1-203ENST00000466285 GPR101Q96P66 508 aaPredicted RBP26.83■■□□□ 1.89
COL6A1-203ENST00000466285 PHAXQ9H814 394 aaKnown RBP26.83■■□□□ 1.89
COL6A1-203ENST00000466285 ELL2O00472 640 aaPredicted RBP26.82■■□□□ 1.88
COL6A1-203ENST00000466285 CCDC184Q52MB2 194 aa26.82■■□□□ 1.88
COL6A1-203ENST00000466285 SPEF2Q9C093 1822 aa26.81■■□□□ 1.88
COL6A1-203ENST00000466285 CST9Q5W186 159 aa26.81■■□□□ 1.88
COL6A1-203ENST00000466285 USP50Q70EL3 339 aaPredicted RBP26.81■■□□□ 1.88
COL6A1-203ENST00000466285 TRPM4Q8TD43 1214 aa26.81■■□□□ 1.88
COL6A1-203ENST00000466285 ABT1Q9ULW3 272 aaKnown RBP26.81■■□□□ 1.88
COL6A1-203ENST00000466285 HIRAP54198 1017 aaPredicted RBP26.79■■□□□ 1.88
COL6A1-203ENST00000466285 DEFB115Q30KQ5 88 aa26.79■■□□□ 1.88
COL6A1-203ENST00000466285 CIAPIN1Q6FI81 312 aa26.79■■□□□ 1.88
COL6A1-203ENST00000466285 C8orf58Q8NAV2 365 aa26.79■■□□□ 1.88
COL6A1-203ENST00000466285 SUPT20HQ8NEM7 779 aa26.79■■□□□ 1.88
COL6A1-203ENST00000466285 ADARB2Q9NS39 739 aaKnown RBP26.79■■□□□ 1.88
COL6A1-203ENST00000466285 WBP1LQ9NX94 342 aa26.79■■□□□ 1.88
COL6A1-203ENST00000466285 GPSM2P81274 684 aa26.78■■□□□ 1.88
COL6A1-203ENST00000466285 SF3B3Q15393 1217 aaKnown RBP26.78■■□□□ 1.88
COL6A1-203ENST00000466285 JARID2Q92833 1246 aaPredicted RBP26.78■■□□□ 1.88
COL6A1-203ENST00000466285 GLIS2Q9BZE0 524 aaPredicted RBP26.78■■□□□ 1.88
COL6A1-203ENST00000466285 TMX4Q9H1E5 349 aaPredicted RBP26.78■■□□□ 1.88
COL6A1-203ENST00000466285 VPS33BQ9H267 617 aa26.78■■□□□ 1.88
COL6A1-203ENST00000466285 HYPKQ9NX55 129 aa26.78■■□□□ 1.88
COL6A1-203ENST00000466285 WDR33Q9C0J8 1336 aaKnown RBP26.78■■□□□ 1.88
COL6A1-203ENST00000466285 DLK2Q6UY11 383 aa26.77■■□□□ 1.88
COL6A1-203ENST00000466285 IFT57Q9NWB7 429 aa26.77■■□□□ 1.88
COL6A1-203ENST00000466285 IRS4O14654 1257 aaPredicted RBP26.76■■□□□ 1.87
COL6A1-203ENST00000466285 CYP4F22Q6NT55 531 aa26.76■■□□□ 1.87
COL6A1-203ENST00000466285 DBNDD1Q9H9R9 158 aa26.76■■□□□ 1.87
COL6A1-203ENST00000466285 POLLQ9UGP5 575 aa26.76■■□□□ 1.87
COL6A1-203ENST00000466285 ZBTB12Q9Y330 459 aaPredicted RBP26.76■■□□□ 1.87
COL6A1-203ENST00000466285 RTL9Q8NET4 1388 aa26.75■■□□□ 1.87
COL6A1-203ENST00000466285 SEC31BQ9NQW1 1179 aa26.75■■□□□ 1.87
COL6A1-203ENST00000466285 KCNQ5Q9NR82 932 aa26.75■■□□□ 1.87
COL6A1-203ENST00000466285 PSME4Q14997 1843 aa26.74■■□□□ 1.87
COL6A1-203ENST00000466285 RIMBP2O15034 1052 aa26.74■■□□□ 1.87
COL6A1-203ENST00000466285 EGFRP00533 1210 aa26.74■■□□□ 1.87
COL6A1-203ENST00000466285 LBX1P52954 281 aa26.74■■□□□ 1.87
COL6A1-203ENST00000466285 GRM1Q13255 1194 aa26.74■■□□□ 1.87
COL6A1-203ENST00000466285 TSPYL6Q8N831 410 aa26.74■■□□□ 1.87
COL6A1-203ENST00000466285 MYD88Q99836 296 aa26.74■■□□□ 1.87
COL6A1-203ENST00000466285 POLR2AP24928 1970 aaKnown RBP26.74■■□□□ 1.87
COL6A1-203ENST00000466285 ZNF646O15015 1829 aaPredicted RBP26.74■■□□□ 1.87
COL6A1-203ENST00000466285 HSPA8P11142 646 aaKnown RBP26.73■■□□□ 1.87
COL6A1-203ENST00000466285 NSFL1CQ9UNZ2 370 aaKnown RBP26.73■■□□□ 1.87
COL6A1-203ENST00000466285 MYH3P11055 1940 aa26.73■■□□□ 1.87
COL6A1-203ENST00000466285 PSMD14O00487 310 aa26.72■■□□□ 1.87
COL6A1-203ENST00000466285 TRIM28Q13263 835 aaKnown RBP26.72■■□□□ 1.87
COL6A1-203ENST00000466285 PAXIP1Q6ZW49 1069 aaPredicted RBP26.72■■□□□ 1.87
COL6A1-203ENST00000466285 RIC3Q7Z5B4 369 aa26.72■■□□□ 1.87
COL6A1-203ENST00000466285 CAPNS2Q96L46 248 aa26.72■■□□□ 1.87
COL6A1-203ENST00000466285 BCL2L13Q9BXK5 485 aa26.72■■□□□ 1.87
COL6A1-203ENST00000466285 CTCFP49711 727 aaPredicted RBP26.71■■□□□ 1.87
COL6A1-203ENST00000466285 GNAI1P63096 354 aa26.71■■□□□ 1.87
COL6A1-203ENST00000466285 GOLGA2Q08379 1002 aa26.71■■□□□ 1.87
COL6A1-203ENST00000466285 DOK7Q18PE1 504 aa26.71■■□□□ 1.87
COL6A1-203ENST00000466285 MICALL2Q8IY33 904 aa26.71■■□□□ 1.87
COL6A1-203ENST00000466285 TSR2Q969E8 191 aaKnown RBP26.71■■□□□ 1.87
COL6A1-203ENST00000466285 AIDAQ96BJ3 306 aa26.71■■□□□ 1.87
COL6A1-203ENST00000466285 CCDC85AQ96PX6 553 aaPredicted RBP26.71■■□□□ 1.87
COL6A1-203ENST00000466285 TLL2Q9Y6L7 1015 aa26.71■■□□□ 1.87
COL6A1-203ENST00000466285 CDHR2Q9BYE9 1310 aa26.7■■□□□ 1.87
COL6A1-203ENST00000466285 AOC2O75106 756 aa26.7■■□□□ 1.86
COL6A1-203ENST00000466285 TMC4Q7Z404 712 aa26.7■■□□□ 1.86
COL6A1-203ENST00000466285 PRDM10Q9NQV6 1147 aa26.7■■□□□ 1.86
COL6A1-203ENST00000466285 PGAP2Q9UHJ9 254 aa26.7■■□□□ 1.86
COL6A1-203ENST00000466285 CELF2O95319 508 aaKnown RBP26.69■■□□□ 1.86
COL6A1-203ENST00000466285 WASHC4Q2M389 1173 aa26.69■■□□□ 1.86
COL6A1-203ENST00000466285 ZBTB38Q8NAP3 1195 aaPredicted RBP26.69■■□□□ 1.86
COL6A1-203ENST00000466285 TBC1D16Q8TBP0 767 aa26.69■■□□□ 1.86
COL6A1-203ENST00000466285 CNOT7Q9UIV1 285 aaKnown RBP26.69■■□□□ 1.86
COL6A1-203ENST00000466285 C6orf229H3BNL8 230 aa26.68■■□□□ 1.86
COL6A1-203ENST00000466285 ECE2O60344 883 aa26.68■■□□□ 1.86
COL6A1-203ENST00000466285 TNIP1Q15025 636 aa26.68■■□□□ 1.86
COL6A1-203ENST00000466285 SAMD7Q7Z3H4 446 aa26.68■■□□□ 1.86
COL6A1-203ENST00000466285 ZNF408Q9H9D4 720 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms