RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CDHR2Q9BYE9 1310 aa21.63■■□□□ 1.05
VPS52-215ENST00000464425 LTBP3Q9NS15 1303 aa21.63■■□□□ 1.05
VPS52-215ENST00000464425 SBF1O95248 1867 aa21.63■■□□□ 1.05
VPS52-215ENST00000464425 FKBP4Q02790 459 aaKnown RBP eCLIP21.63■■□□□ 1.05
VPS52-215ENST00000464425 CC2D2BQ6DHV5 1058 aa21.63■■□□□ 1.05
VPS52-215ENST00000464425 TMX4Q9H1E5 349 aaPredicted RBP21.63■■□□□ 1.05
VPS52-215ENST00000464425 ZNF277Q9NRM2 450 aaPredicted RBP21.63■■□□□ 1.05
VPS52-215ENST00000464425 ATP6V0A2Q9Y487 856 aa21.63■■□□□ 1.05
VPS52-215ENST00000464425 FER1L6Q2WGJ9 1857 aa21.62■■□□□ 1.05
VPS52-215ENST00000464425 CELF1Q92879 486 aaKnown RBP21.62■■□□□ 1.05
VPS52-215ENST00000464425 GPBP1L1Q9HC44 474 aaPredicted RBP21.62■■□□□ 1.05
VPS52-215ENST00000464425 PTPRCP08575 1304 aa21.61■■□□□ 1.05
VPS52-215ENST00000464425 CCDC152Q4G0S7 254 aa21.61■■□□□ 1.05
VPS52-215ENST00000464425 SEC31BQ9NQW1 1179 aa21.61■■□□□ 1.05
VPS52-215ENST00000464425 SP8Q8IXZ3 490 aa21.6■■□□□ 1.05
VPS52-215ENST00000464425 TAF1P21675 1872 aa21.6■■□□□ 1.05
VPS52-215ENST00000464425 RARSP54136 660 aaKnown RBP21.59■■□□□ 1.05
VPS52-215ENST00000464425 CASP7P55210 303 aa21.59■■□□□ 1.05
VPS52-215ENST00000464425 CTSWP56202 376 aa21.59■■□□□ 1.05
VPS52-215ENST00000464425 SRCIN1Q9C0H9 1055 aa21.59■■□□□ 1.05
VPS52-215ENST00000464425 CCDC88AQ3V6T2 1871 aa21.58■■□□□ 1.05
VPS52-215ENST00000464425 RPS8P62241 208 aaKnown RBP21.58■■□□□ 1.05
VPS52-215ENST00000464425 GRIPAP1Q4V328 841 aa21.58■■□□□ 1.05
VPS52-215ENST00000464425 TTLL11Q8NHH1 800 aa21.58■■□□□ 1.05
VPS52-215ENST00000464425 PSMD1Q99460 953 aa21.58■■□□□ 1.05
VPS52-215ENST00000464425 NOB1Q9ULX3 412 aaKnown RBP21.58■■□□□ 1.05
VPS52-215ENST00000464425 SNED1Q8TER0 1413 aa21.57■■□□□ 1.04
VPS52-215ENST00000464425 ALDH1L1O75891 902 aa21.57■■□□□ 1.04
VPS52-215ENST00000464425 GREM2Q9H772 168 aa21.57■■□□□ 1.04
VPS52-215ENST00000464425 C9orf78Q9NZ63 289 aaPredicted RBP21.57■■□□□ 1.04
VPS52-215ENST00000464425 GRM8O00222 908 aa21.56■■□□□ 1.04
VPS52-215ENST00000464425 IARSP41252 1262 aaKnown RBP21.56■■□□□ 1.04
VPS52-215ENST00000464425 TMC4Q7Z404 712 aa21.56■■□□□ 1.04
VPS52-215ENST00000464425 MPNDQ8N594 471 aa21.56■■□□□ 1.04
VPS52-215ENST00000464425 PLA2G12BQ9BX93 195 aa21.56■■□□□ 1.04
VPS52-215ENST00000464425 ZC3H4Q9UPT8 1303 aaKnown RBP21.55■■□□□ 1.04
VPS52-215ENST00000464425 DPP8Q6V1X1 898 aaPredicted RBP21.55■■□□□ 1.04
VPS52-215ENST00000464425 COL4A1P02462 1669 aa21.55■■□□□ 1.04
VPS52-215ENST00000464425 NMRK2Q9NPI5 230 aa21.54■■□□□ 1.04
VPS52-215ENST00000464425 KDM2BQ8NHM5 1336 aa21.54■■□□□ 1.04
VPS52-215ENST00000464425 BRPF1P55201 1214 aaPredicted RBP21.53■■□□□ 1.04
VPS52-215ENST00000464425 ANKRD18AQ8IVF6 992 aa21.53■■□□□ 1.04
VPS52-215ENST00000464425 NSFL1CQ9UNZ2 370 aaKnown RBP21.53■■□□□ 1.04
VPS52-215ENST00000464425 GLTPD2A6NH11 291 aa21.52■■□□□ 1.04
VPS52-215ENST00000464425 BCAR3O75815 825 aa21.52■■□□□ 1.04
VPS52-215ENST00000464425 GPSM2P81274 684 aa21.52■■□□□ 1.04
VPS52-215ENST00000464425 FOXO4P98177 505 aa21.52■■□□□ 1.04
VPS52-215ENST00000464425 DPY19L2Q6NUT2 758 aa21.52■■□□□ 1.04
VPS52-215ENST00000464425 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
VPS52-215ENST00000464425 CDC5LQ99459 802 aaKnown RBP21.52■■□□□ 1.04
VPS52-215ENST00000464425 PPIP5K2O43314 1243 aa21.51■■□□□ 1.03
VPS52-215ENST00000464425 CSF1RP07333 972 aa21.51■■□□□ 1.03
VPS52-215ENST00000464425 NBPF7P0C2Y1 421 aaPredicted RBP21.51■■□□□ 1.03
VPS52-215ENST00000464425 AOC3Q16853 763 aa21.51■■□□□ 1.03
VPS52-215ENST00000464425 FAM161AQ3B820 660 aa21.51■■□□□ 1.03
VPS52-215ENST00000464425 EPHA10Q5JZY3 1008 aa21.51■■□□□ 1.03
VPS52-215ENST00000464425 SUPT20HQ8NEM7 779 aa21.51■■□□□ 1.03
VPS52-215ENST00000464425 JDP2Q8WYK2 163 aa21.51■■□□□ 1.03
VPS52-215ENST00000464425 RTFDC1Q9BY42 306 aaPredicted RBP21.51■■□□□ 1.03
VPS52-215ENST00000464425 RRAGCQ9HB90 399 aa21.51■■□□□ 1.03
VPS52-215ENST00000464425 ITGA6P23229 1130 aa21.5■■□□□ 1.03
VPS52-215ENST00000464425 API5Q9BZZ5 524 aaKnown RBP21.5■■□□□ 1.03
VPS52-215ENST00000464425 CHMP3Q9Y3E7 222 aa21.5■■□□□ 1.03
VPS52-215ENST00000464425 DICER1Q9UPY3 1922 aaKnown RBP21.49■■□□□ 1.03
VPS52-215ENST00000464425 KIF3CO14782 793 aa21.49■■□□□ 1.03
VPS52-215ENST00000464425 LMBR1LQ6UX01 489 aa21.49■■□□□ 1.03
VPS52-215ENST00000464425 FRAT1Q92837 279 aaPredicted RBP21.49■■□□□ 1.03
VPS52-215ENST00000464425 SUCLG2Q96I99 432 aa21.49■■□□□ 1.03
VPS52-215ENST00000464425 TIAM2Q8IVF5 1701 aa21.49■■□□□ 1.03
VPS52-215ENST00000464425 RTL9Q8NET4 1388 aa21.48■■□□□ 1.03
VPS52-215ENST00000464425 C6orf229H3BNL8 230 aa21.48■■□□□ 1.03
VPS52-215ENST00000464425 DDNO94850 711 aaPredicted RBP21.48■■□□□ 1.03
VPS52-215ENST00000464425 ANKIB1Q9P2G1 1089 aa21.48■■□□□ 1.03
VPS52-215ENST00000464425 POLLQ9UGP5 575 aa21.48■■□□□ 1.03
VPS52-215ENST00000464425 KIF16BQ96L93 1317 aa21.48■■□□□ 1.03
VPS52-215ENST00000464425 ZNF541Q9H0D2 1346 aa21.48■■□□□ 1.03
VPS52-215ENST00000464425 MYH3P11055 1940 aa21.47■■□□□ 1.03
VPS52-215ENST00000464425 FZD9O00144 591 aa21.47■■□□□ 1.03
VPS52-215ENST00000464425 CCT4P50991 539 aaKnown RBP21.47■■□□□ 1.03
VPS52-215ENST00000464425 NIM1KQ8IY84 436 aa21.47■■□□□ 1.03
VPS52-215ENST00000464425 ARHGAP45Q92619 1136 aa21.47■■□□□ 1.03
VPS52-215ENST00000464425 USP44Q9H0E7 712 aa21.47■■□□□ 1.03
VPS52-215ENST00000464425 BSDC1Q9NW68 430 aaPredicted RBP21.47■■□□□ 1.03
VPS52-215ENST00000464425 UTYO14607 1347 aa21.47■■□□□ 1.03
VPS52-215ENST00000464425 ANKRD18BA2A2Z9 1011 aa21.46■■□□□ 1.03
VPS52-215ENST00000464425 RIMBP2O15034 1052 aa21.46■■□□□ 1.03
VPS52-215ENST00000464425 IPO8O15397 1037 aaKnown RBP21.46■■□□□ 1.03
VPS52-215ENST00000464425 IGHMBP2P38935 993 aaKnown RBP21.46■■□□□ 1.03
VPS52-215ENST00000464425 IFIT5Q13325 482 aaKnown RBP21.46■■□□□ 1.03
VPS52-215ENST00000464425 KAZALD1Q96I82 304 aa21.46■■□□□ 1.03
VPS52-215ENST00000464425 GPR101Q96P66 508 aaPredicted RBP21.46■■□□□ 1.03
VPS52-215ENST00000464425 VPS33BQ9H267 617 aa21.46■■□□□ 1.03
VPS52-215ENST00000464425 COL4A5P29400 1685 aa21.46■■□□□ 1.03
VPS52-215ENST00000464425 KIAA2012Q0VF49 1180 aa21.45■■□□□ 1.02
VPS52-215ENST00000464425 WASHC4Q2M389 1173 aa21.45■■□□□ 1.02
VPS52-215ENST00000464425 TBC1D16Q8TBP0 767 aa21.45■■□□□ 1.02
VPS52-215ENST00000464425 MPHOSPH8Q99549 860 aa21.45■■□□□ 1.02
VPS52-215ENST00000464425 MINPP1Q9UNW1 487 aa21.45■■□□□ 1.02
VPS52-215ENST00000464425 LRRC37AA6NMS7 1700 aa21.44■■□□□ 1.02
VPS52-215ENST00000464425 UFL1O94874 794 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms