RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 GRAPLQ8TC17 118 aaPredicted RBP17.13■□□□□ 0.33
UBA3-205ENST00000461934 MKRN1Q9UHC7 482 aaKnown RBP17.13■□□□□ 0.33
UBA3-205ENST00000461934 POLR2AP24928 1970 aaKnown RBP17.12■□□□□ 0.33
UBA3-205ENST00000461934 ATP5J2-PTCD1G3V325 749 aa17.12■□□□□ 0.33
UBA3-205ENST00000461934 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
UBA3-205ENST00000461934 SP8Q8IXZ3 490 aa17.12■□□□□ 0.33
UBA3-205ENST00000461934 TMEM88BA6NKF7 163 aa17.11■□□□□ 0.33
UBA3-205ENST00000461934 ELL2O00472 640 aaPredicted RBP17.11■□□□□ 0.33
UBA3-205ENST00000461934 HSPA1AP0DMV8 641 aaKnown RBP17.11■□□□□ 0.33
UBA3-205ENST00000461934 HSPA1BP0DMV9 641 aaKnown RBP17.11■□□□□ 0.33
UBA3-205ENST00000461934 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
UBA3-205ENST00000461934 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
UBA3-205ENST00000461934 MAP1SQ66K74 1059 aaPredicted RBP17.1■□□□□ 0.33
UBA3-205ENST00000461934 CNTROBQ8N137 903 aa17.1■□□□□ 0.33
UBA3-205ENST00000461934 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
UBA3-205ENST00000461934 PASKQ96RG2 1323 aa17.1■□□□□ 0.33
UBA3-205ENST00000461934 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
UBA3-205ENST00000461934 ZEB1P37275 1124 aaPredicted RBP17.09■□□□□ 0.33
UBA3-205ENST00000461934 ISCA1Q9BUE6 129 aa17.09■□□□□ 0.33
UBA3-205ENST00000461934 ZNRF3Q9ULT6 936 aa17.09■□□□□ 0.33
UBA3-205ENST00000461934 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
UBA3-205ENST00000461934 C1QBPQ07021 282 aaKnown RBP17.08■□□□□ 0.32
UBA3-205ENST00000461934 CCDC30Q5VVM6 783 aa17.08■□□□□ 0.32
UBA3-205ENST00000461934 SLC51AQ86UW1 340 aa17.08■□□□□ 0.32
UBA3-205ENST00000461934 BCL2L13Q9BXK5 485 aa17.08■□□□□ 0.32
UBA3-205ENST00000461934 RTFDC1Q9BY42 306 aaPredicted RBP17.08■□□□□ 0.32
UBA3-205ENST00000461934 PSME4Q14997 1843 aa17.07■□□□□ 0.32
UBA3-205ENST00000461934 CNTNAP1P78357 1384 aa17.07■□□□□ 0.32
UBA3-205ENST00000461934 IRS4O14654 1257 aaPredicted RBP17.07■□□□□ 0.32
UBA3-205ENST00000461934 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
UBA3-205ENST00000461934 EPS15P42566 896 aa17.07■□□□□ 0.32
UBA3-205ENST00000461934 SCNN1DP51172 638 aa17.07■□□□□ 0.32
UBA3-205ENST00000461934 TNIP1Q15025 636 aa17.07■□□□□ 0.32
UBA3-205ENST00000461934 CIAPIN1Q6FI81 312 aa17.07■□□□□ 0.32
UBA3-205ENST00000461934 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
UBA3-205ENST00000461934 MYD88Q99836 296 aa17.07■□□□□ 0.32
UBA3-205ENST00000461934 PHAXQ9H814 394 aaKnown RBP17.07■□□□□ 0.32
UBA3-205ENST00000461934 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
UBA3-205ENST00000461934 ADARB2Q9NS39 739 aaKnown RBP17.06■□□□□ 0.32
UBA3-205ENST00000461934 ABT1Q9ULW3 272 aaKnown RBP17.06■□□□□ 0.32
UBA3-205ENST00000461934 NSFL1CQ9UNZ2 370 aaKnown RBP17.06■□□□□ 0.32
UBA3-205ENST00000461934 C6orf229H3BNL8 230 aa17.05■□□□□ 0.32
UBA3-205ENST00000461934 CXCL9Q07325 125 aa17.05■□□□□ 0.32
UBA3-205ENST00000461934 SF3B3Q15393 1217 aaKnown RBP17.05■□□□□ 0.32
UBA3-205ENST00000461934 COL13A1Q5TAT6 717 aaPredicted RBP17.05■□□□□ 0.32
UBA3-205ENST00000461934 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
UBA3-205ENST00000461934 STK31Q9BXU1 1019 aa17.05■□□□□ 0.32
UBA3-205ENST00000461934 DUOX1Q9NRD9 1551 aa17.05■□□□□ 0.32
UBA3-205ENST00000461934 G3V3G9 751 aa17.04■□□□□ 0.32
UBA3-205ENST00000461934 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
UBA3-205ENST00000461934 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
UBA3-205ENST00000461934 DEFB115Q30KQ5 88 aa17.04■□□□□ 0.32
UBA3-205ENST00000461934 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
UBA3-205ENST00000461934 TNS4Q8IZW8 715 aa17.04■□□□□ 0.32
UBA3-205ENST00000461934 ZBTB38Q8NAP3 1195 aaPredicted RBP17.04■□□□□ 0.32
UBA3-205ENST00000461934 C8orf58Q8NAV2 365 aa17.04■□□□□ 0.32
UBA3-205ENST00000461934 EYA3Q99504 573 aa17.04■□□□□ 0.32
UBA3-205ENST00000461934 GPRC5DQ9NZD1 345 aa17.04■□□□□ 0.32
UBA3-205ENST00000461934 ANP32CO43423 234 aa17.03■□□□□ 0.32
UBA3-205ENST00000461934 RAD17O75943 681 aa17.03■□□□□ 0.32
UBA3-205ENST00000461934 GMPSP49915 693 aaPredicted RBP17.03■□□□□ 0.32
UBA3-205ENST00000461934 PAXIP1Q6ZW49 1069 aaPredicted RBP17.03■□□□□ 0.32
UBA3-205ENST00000461934 CCDC191Q8NCU4 936 aa17.03■□□□□ 0.32
UBA3-205ENST00000461934 CELF1Q92879 486 aaKnown RBP17.03■□□□□ 0.32
UBA3-205ENST00000461934 CWC25Q9NXE8 425 aaPredicted RBP17.03■□□□□ 0.32
UBA3-205ENST00000461934 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.32
UBA3-205ENST00000461934 RIMBP2O15034 1052 aa17.02■□□□□ 0.32
UBA3-205ENST00000461934 NEXNQ0ZGT2 675 aa17.02■□□□□ 0.32
UBA3-205ENST00000461934 CCDC152Q4G0S7 254 aa17.02■□□□□ 0.32
UBA3-205ENST00000461934 MRS2Q9HD23 443 aa17.02■□□□□ 0.32
UBA3-205ENST00000461934 SCN9AQ15858 1988 aa17.02■□□□□ 0.31
UBA3-205ENST00000461934 H7C1D1 291 aa17.01■□□□□ 0.31
UBA3-205ENST00000461934 PDE8AO60658 829 aa17.01■□□□□ 0.31
UBA3-205ENST00000461934 PCCAP05165 728 aaPredicted RBP17.01■□□□□ 0.31
UBA3-205ENST00000461934 VEGFBP49765 207 aa17.01■□□□□ 0.31
UBA3-205ENST00000461934 RPS8P62241 208 aaKnown RBP17.01■□□□□ 0.31
UBA3-205ENST00000461934 TSR2Q969E8 191 aaKnown RBP17.01■□□□□ 0.31
UBA3-205ENST00000461934 METTL22Q9BUU2 404 aaPredicted RBP17.01■□□□□ 0.31
UBA3-205ENST00000461934 COL4A1P02462 1669 aa17.01■□□□□ 0.31
UBA3-205ENST00000461934 CCDC27Q2M243 656 aa17■□□□□ 0.31
UBA3-205ENST00000461934 DBNDD1Q9H9R9 158 aa17■□□□□ 0.31
UBA3-205ENST00000461934 ANKIB1Q9P2G1 1089 aa17■□□□□ 0.31
UBA3-205ENST00000461934 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
UBA3-205ENST00000461934 RASSF10A6NK89 507 aa16.99■□□□□ 0.31
UBA3-205ENST00000461934 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
UBA3-205ENST00000461934 GPSM2P81274 684 aa16.99■□□□□ 0.31
UBA3-205ENST00000461934 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
UBA3-205ENST00000461934 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
UBA3-205ENST00000461934 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
UBA3-205ENST00000461934 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
UBA3-205ENST00000461934 ECE1P42892 770 aa16.98■□□□□ 0.31
UBA3-205ENST00000461934 GRM1Q13255 1194 aa16.98■□□□□ 0.31
UBA3-205ENST00000461934 KSR2Q6VAB6 950 aa16.98■□□□□ 0.31
UBA3-205ENST00000461934 ANKRD18AQ8IVF6 992 aa16.98■□□□□ 0.31
UBA3-205ENST00000461934 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
UBA3-205ENST00000461934 CCDC85AQ96PX6 553 aaPredicted RBP16.98■□□□□ 0.31
UBA3-205ENST00000461934 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
UBA3-205ENST00000461934 PCNTO95613 3336 aa16.98■□□□□ 0.31
UBA3-205ENST00000461934 WDR33Q9C0J8 1336 aaKnown RBP16.97■□□□□ 0.31
UBA3-205ENST00000461934 PI4KAP2A4QPH2 592 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms