RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 LTBP3Q9NS15 1303 aa13.43□□□□□ -0.26
TRAPPC12-213ENST00000461577 MYH3P11055 1940 aa13.43□□□□□ -0.26
TRAPPC12-213ENST00000461577 H7C1W4 665 aa13.43□□□□□ -0.26
TRAPPC12-213ENST00000461577 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRAPPC12-213ENST00000461577 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
TRAPPC12-213ENST00000461577 BEND3Q5T5X7 828 aa13.43□□□□□ -0.26
TRAPPC12-213ENST00000461577 OLFM4Q6UX06 510 aa13.43□□□□□ -0.26
TRAPPC12-213ENST00000461577 UBE3BQ7Z3V4 1068 aa13.43□□□□□ -0.26
TRAPPC12-213ENST00000461577 ZNF526Q8TF50 670 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC12-213ENST00000461577 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
TRAPPC12-213ENST00000461577 SRCIN1Q9C0H9 1055 aa13.42□□□□□ -0.26
TRAPPC12-213ENST00000461577 ATP6V0A2Q9Y487 856 aa13.42□□□□□ -0.26
TRAPPC12-213ENST00000461577 DICER1Q9UPY3 1922 aaKnown RBP13.42□□□□□ -0.26
TRAPPC12-213ENST00000461577 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
TRAPPC12-213ENST00000461577 PRELPP51888 382 aa13.41□□□□□ -0.26
TRAPPC12-213ENST00000461577 CTSWP56202 376 aa13.41□□□□□ -0.26
TRAPPC12-213ENST00000461577 SP8Q8IXZ3 490 aa13.41□□□□□ -0.26
TRAPPC12-213ENST00000461577 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-213ENST00000461577 GPBP1L1Q9HC44 474 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-213ENST00000461577 C9orf78Q9NZ63 289 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-213ENST00000461577 TIAM2Q8IVF5 1701 aa13.41□□□□□ -0.26
TRAPPC12-213ENST00000461577 ZC3H4Q9UPT8 1303 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-213ENST00000461577 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-213ENST00000461577 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-213ENST00000461577 PSMD1Q99460 953 aa13.4□□□□□ -0.26
TRAPPC12-213ENST00000461577 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-213ENST00000461577 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-213ENST00000461577 IARSP41252 1262 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-213ENST00000461577 CASP7P55210 303 aa13.39□□□□□ -0.27
TRAPPC12-213ENST00000461577 RPS8P62241 208 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-213ENST00000461577 PLA2G12BQ9BX93 195 aa13.39□□□□□ -0.27
TRAPPC12-213ENST00000461577 SEC31BQ9NQW1 1179 aa13.39□□□□□ -0.27
TRAPPC12-213ENST00000461577 GRM8O00222 908 aa13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 MPNDQ8N594 471 aa13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 SUPT20HQ8NEM7 779 aa13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 TTLL11Q8NHH1 800 aa13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 API5Q9BZZ5 524 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 SNED1Q8TER0 1413 aa13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 KIF16BQ96L93 1317 aa13.38□□□□□ -0.27
TRAPPC12-213ENST00000461577 GREM2Q9H772 168 aa13.37□□□□□ -0.27
TRAPPC12-213ENST00000461577 CHMP3Q9Y3E7 222 aa13.37□□□□□ -0.27
TRAPPC12-213ENST00000461577 SPEF2Q9C093 1822 aa13.36□□□□□ -0.27
TRAPPC12-213ENST00000461577 LRRC37AA6NMS7 1700 aa13.36□□□□□ -0.27
TRAPPC12-213ENST00000461577 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
TRAPPC12-213ENST00000461577 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-213ENST00000461577 CCT4P50991 539 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-213ENST00000461577 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
TRAPPC12-213ENST00000461577 LARGE2Q8N3Y3 721 aa13.36□□□□□ -0.27
TRAPPC12-213ENST00000461577 JDP2Q8WYK2 163 aa13.36□□□□□ -0.27
TRAPPC12-213ENST00000461577 COL4A1P02462 1669 aa13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 GLTPD2A6NH11 291 aa13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 PPIP5K2O43314 1243 aa13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 BCAR3O75815 825 aa13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 CSF1RP07333 972 aa13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 ITGA6P23229 1130 aa13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 IGHMBP2P38935 993 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 FAM161AQ3B820 660 aa13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 ARHGAP45Q92619 1136 aa13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 VPS33BQ9H267 617 aa13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 NSFL1CQ9UNZ2 370 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-213ENST00000461577 ANKRD18BA2A2Z9 1011 aa13.34□□□□□ -0.27
TRAPPC12-213ENST00000461577 C6orf229H3BNL8 230 aa13.34□□□□□ -0.27
TRAPPC12-213ENST00000461577 GPSM2P81274 684 aa13.34□□□□□ -0.27
TRAPPC12-213ENST00000461577 FOXO4P98177 505 aa13.34□□□□□ -0.27
TRAPPC12-213ENST00000461577 NIM1KQ8IY84 436 aa13.34□□□□□ -0.27
TRAPPC12-213ENST00000461577 RTFDC1Q9BY42 306 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-213ENST00000461577 NBPF7P0C2Y1 421 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 IFIT5Q13325 482 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 AOC3Q16853 763 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 TAF7LQ5H9L4 462 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 LMBR1LQ6UX01 489 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 SUCLG2Q96I99 432 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 EYA3Q99504 573 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 MPHOSPH8Q99549 860 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 NMRK2Q9NPI5 230 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 ANKIB1Q9P2G1 1089 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 UTYO14607 1347 aa13.33□□□□□ -0.28
TRAPPC12-213ENST00000461577 CCDC57Q2TAC2 916 aa13.32□□□□□ -0.28
TRAPPC12-213ENST00000461577 EPHA10Q5JZY3 1008 aa13.32□□□□□ -0.28
TRAPPC12-213ENST00000461577 C16orf71Q8IYS4 520 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC12-213ENST00000461577 BSDC1Q9NW68 430 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC12-213ENST00000461577 GGA1Q9UJY5 639 aa13.32□□□□□ -0.28
TRAPPC12-213ENST00000461577 FZD9O00144 591 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 DDNO94850 711 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 UFL1O94874 794 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 KIAA2012Q0VF49 1180 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 WASHC4Q2M389 1173 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 ZKSCAN2Q63HK3 967 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 ATF7IPQ6VMQ6 1270 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 USP44Q9H0E7 712 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 PODXL2Q9NZ53 605 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms