RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 MYH3P11055 1940 aa19.14■□□□□ 0.65
SMPD4-216ENST00000461187 GRAPQ13588 217 aa19.14■□□□□ 0.65
SMPD4-216ENST00000461187 DUSP27Q5VZP5 1158 aa19.14■□□□□ 0.65
SMPD4-216ENST00000461187 DPP8Q6V1X1 898 aaPredicted RBP19.14■□□□□ 0.65
SMPD4-216ENST00000461187 MPNDQ8N594 471 aa19.14■□□□□ 0.65
SMPD4-216ENST00000461187 GRAPLQ8TC17 118 aaPredicted RBP19.14■□□□□ 0.65
SMPD4-216ENST00000461187 ISCA1Q9BUE6 129 aa19.14■□□□□ 0.65
SMPD4-216ENST00000461187 MBIPQ9NS73 344 aa19.14■□□□□ 0.65
SMPD4-216ENST00000461187 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
SMPD4-216ENST00000461187 CXCL9Q07325 125 aa19.13■□□□□ 0.65
SMPD4-216ENST00000461187 USP50Q70EL3 339 aaPredicted RBP19.13■□□□□ 0.65
SMPD4-216ENST00000461187 ZNRF3Q9ULT6 936 aa19.13■□□□□ 0.65
SMPD4-216ENST00000461187 RASSF10A6NK89 507 aa19.12■□□□□ 0.65
SMPD4-216ENST00000461187 KIAA2012Q0VF49 1180 aa19.12■□□□□ 0.65
SMPD4-216ENST00000461187 HYPKQ9NX55 129 aa19.12■□□□□ 0.65
SMPD4-216ENST00000461187 GPRC5DQ9NZD1 345 aa19.12■□□□□ 0.65
SMPD4-216ENST00000461187 CACNA1FO60840 1977 aa19.12■□□□□ 0.65
SMPD4-216ENST00000461187 SCN9AQ15858 1988 aa19.12■□□□□ 0.65
SMPD4-216ENST00000461187 ATP5J2-PTCD1G3V325 749 aa19.11■□□□□ 0.65
SMPD4-216ENST00000461187 FOXN1O15353 648 aa19.11■□□□□ 0.65
SMPD4-216ENST00000461187 FAM89AQ96GI7 184 aa19.11■□□□□ 0.65
SMPD4-216ENST00000461187 THSD7BQ9C0I4 1608 aa19.11■□□□□ 0.65
SMPD4-216ENST00000461187 PSME4Q14997 1843 aa19.1■□□□□ 0.65
SMPD4-216ENST00000461187 APAF1O14727 1248 aa19.1■□□□□ 0.65
SMPD4-216ENST00000461187 FMR1Q06787 632 aaKnown RBP eCLIP19.1■□□□□ 0.65
SMPD4-216ENST00000461187 SF3B3Q15393 1217 aaKnown RBP19.1■□□□□ 0.65
SMPD4-216ENST00000461187 DEFB115Q30KQ5 88 aa19.1■□□□□ 0.65
SMPD4-216ENST00000461187 TMC4Q7Z404 712 aa19.1■□□□□ 0.65
SMPD4-216ENST00000461187 TRIM28Q13263 835 aaKnown RBP19.09■□□□□ 0.65
SMPD4-216ENST00000461187 CIAPIN1Q6FI81 312 aa19.09■□□□□ 0.65
SMPD4-216ENST00000461187 ADARB2Q9NS39 739 aaKnown RBP19.09■□□□□ 0.65
SMPD4-216ENST00000461187 IFT57Q9NWB7 429 aa19.09■□□□□ 0.65
SMPD4-216ENST00000461187 SPEF2Q9C093 1822 aa19.09■□□□□ 0.65
SMPD4-216ENST00000461187 CAPN15O75808 1086 aa19.08■□□□□ 0.64
SMPD4-216ENST00000461187 GMPSP49915 693 aaPredicted RBP19.08■□□□□ 0.64
SMPD4-216ENST00000461187 CELF1Q92879 486 aaKnown RBP19.08■□□□□ 0.64
SMPD4-216ENST00000461187 ABT1Q9ULW3 272 aaKnown RBP19.08■□□□□ 0.64
SMPD4-216ENST00000461187 YDJCA8MPS7 323 aa19.07■□□□□ 0.64
SMPD4-216ENST00000461187 TRAF5O00463 557 aa19.07■□□□□ 0.64
SMPD4-216ENST00000461187 GNAI1P63096 354 aa19.07■□□□□ 0.64
SMPD4-216ENST00000461187 RTL5Q5HYW3 569 aaPredicted RBP19.07■□□□□ 0.64
SMPD4-216ENST00000461187 WBP1LQ9NX94 342 aa19.07■□□□□ 0.64
SMPD4-216ENST00000461187 CDHR2Q9BYE9 1310 aa19.06■□□□□ 0.64
SMPD4-216ENST00000461187 WDR33Q9C0J8 1336 aaKnown RBP19.06■□□□□ 0.64
SMPD4-216ENST00000461187 RAD17O75943 681 aa19.06■□□□□ 0.64
SMPD4-216ENST00000461187 TNIP1Q15025 636 aa19.06■□□□□ 0.64
SMPD4-216ENST00000461187 CST9Q5W186 159 aa19.06■□□□□ 0.64
SMPD4-216ENST00000461187 PHAXQ9H814 394 aaKnown RBP19.06■□□□□ 0.64
SMPD4-216ENST00000461187 ELL2O00472 640 aaPredicted RBP19.05■□□□□ 0.64
SMPD4-216ENST00000461187 IRS4O14654 1257 aaPredicted RBP19.05■□□□□ 0.64
SMPD4-216ENST00000461187 CALD1Q05682 793 aaKnown RBP19.05■□□□□ 0.64
SMPD4-216ENST00000461187 RIC3Q7Z5B4 369 aa19.05■□□□□ 0.64
SMPD4-216ENST00000461187 AIDAQ96BJ3 306 aa19.05■□□□□ 0.64
SMPD4-216ENST00000461187 PRDM10Q9NQV6 1147 aa19.05■□□□□ 0.64
SMPD4-216ENST00000461187 CTCFP49711 727 aaPredicted RBP19.04■□□□□ 0.64
SMPD4-216ENST00000461187 GOLGA2Q08379 1002 aa19.04■□□□□ 0.64
SMPD4-216ENST00000461187 C8orf58Q8NAV2 365 aa19.04■□□□□ 0.64
SMPD4-216ENST00000461187 BCL2L13Q9BXK5 485 aa19.04■□□□□ 0.64
SMPD4-216ENST00000461187 PGAP2Q9UHJ9 254 aa19.04■□□□□ 0.64
SMPD4-216ENST00000461187 NSFL1CQ9UNZ2 370 aaKnown RBP19.04■□□□□ 0.64
SMPD4-216ENST00000461187 HIRAP54198 1017 aaPredicted RBP19.03■□□□□ 0.64
SMPD4-216ENST00000461187 GPSM2P81274 684 aa19.03■□□□□ 0.64
SMPD4-216ENST00000461187 WASHC4Q2M389 1173 aa19.03■□□□□ 0.64
SMPD4-216ENST00000461187 ZBTB38Q8NAP3 1195 aaPredicted RBP19.03■□□□□ 0.64
SMPD4-216ENST00000461187 POLLQ9UGP5 575 aa19.03■□□□□ 0.64
SMPD4-216ENST00000461187 SHTN1A0MZ66 631 aa19.02■□□□□ 0.64
SMPD4-216ENST00000461187 TRPM4Q8TD43 1214 aa19.02■□□□□ 0.64
SMPD4-216ENST00000461187 MYD88Q99836 296 aa19.02■□□□□ 0.64
SMPD4-216ENST00000461187 CNOT7Q9UIV1 285 aaKnown RBP19.02■□□□□ 0.64
SMPD4-216ENST00000461187 TLL2Q9Y6L7 1015 aa19.02■□□□□ 0.64
SMPD4-216ENST00000461187 CASP8AP2Q9UKL3 1982 aa19.01■□□□□ 0.63
SMPD4-216ENST00000461187 C6orf229H3BNL8 230 aa19.01■□□□□ 0.63
SMPD4-216ENST00000461187 RIMBP2O15034 1052 aa19.01■□□□□ 0.63
SMPD4-216ENST00000461187 RPS8P62241 208 aaKnown RBP19.01■□□□□ 0.63
SMPD4-216ENST00000461187 CCDC191Q8NCU4 936 aa19.01■□□□□ 0.63
SMPD4-216ENST00000461187 ZC3H15Q8WU90 426 aaKnown RBP19.01■□□□□ 0.63
SMPD4-216ENST00000461187 CAPNS2Q96L46 248 aa19.01■□□□□ 0.63
SMPD4-216ENST00000461187 GLIS2Q9BZE0 524 aaPredicted RBP19.01■□□□□ 0.63
SMPD4-216ENST00000461187 DBNDD1Q9H9R9 158 aa19.01■□□□□ 0.63
SMPD4-216ENST00000461187 PSMD14O00487 310 aa19■□□□□ 0.63
SMPD4-216ENST00000461187 LBX1P52954 281 aa19■□□□□ 0.63
SMPD4-216ENST00000461187 MAP2K1Q02750 393 aaPredicted RBP19■□□□□ 0.63
SMPD4-216ENST00000461187 CYP4F22Q6NT55 531 aa19■□□□□ 0.63
SMPD4-216ENST00000461187 SEC31BQ9NQW1 1179 aa19■□□□□ 0.63
SMPD4-216ENST00000461187 ZBTB12Q9Y330 459 aaPredicted RBP19■□□□□ 0.63
SMPD4-216ENST00000461187 H7C1D1 291 aa18.99■□□□□ 0.63
SMPD4-216ENST00000461187 PCCAP05165 728 aaPredicted RBP18.99■□□□□ 0.63
SMPD4-216ENST00000461187 HSPA8P11142 646 aaKnown RBP18.99■□□□□ 0.63
SMPD4-216ENST00000461187 ECE1P42892 770 aa18.99■□□□□ 0.63
SMPD4-216ENST00000461187 CCDC184Q52MB2 194 aa18.99■□□□□ 0.63
SMPD4-216ENST00000461187 CCDC30Q5VVM6 783 aa18.99■□□□□ 0.63
SMPD4-216ENST00000461187 PAXIP1Q6ZW49 1069 aaPredicted RBP18.99■□□□□ 0.63
SMPD4-216ENST00000461187 MICALL2Q8IY33 904 aa18.99■□□□□ 0.63
SMPD4-216ENST00000461187 TSPYL6Q8N831 410 aa18.99■□□□□ 0.63
SMPD4-216ENST00000461187 TBC1D16Q8TBP0 767 aa18.99■□□□□ 0.63
SMPD4-216ENST00000461187 DPF2Q92785 391 aa18.99■□□□□ 0.63
SMPD4-216ENST00000461187 ZNF646O15015 1829 aaPredicted RBP18.98■□□□□ 0.63
SMPD4-216ENST00000461187 ECE2O60344 883 aa18.98■□□□□ 0.63
SMPD4-216ENST00000461187 CELF2O95319 508 aaKnown RBP18.98■□□□□ 0.63
SMPD4-216ENST00000461187 HSP90B1P14625 803 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms