RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
RAB11FIP3-207ENST00000461009 HACL1Q9UJ83 578 aa16.91■□□□□ 0.3
RAB11FIP3-207ENST00000461009 TRIM28Q13263 835 aaKnown RBP16.9■□□□□ 0.3
RAB11FIP3-207ENST00000461009 GRAPQ13588 217 aa16.9■□□□□ 0.3
RAB11FIP3-207ENST00000461009 DPP8Q6V1X1 898 aaPredicted RBP16.9■□□□□ 0.3
RAB11FIP3-207ENST00000461009 PNMA8AQ86V59 439 aaPredicted RBP16.9■□□□□ 0.3
RAB11FIP3-207ENST00000461009 GRAPLQ8TC17 118 aaPredicted RBP16.9■□□□□ 0.3
RAB11FIP3-207ENST00000461009 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 LMOD1P29536 600 aaPredicted RBP16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 LDHDQ86WU2 507 aa16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 MPNDQ8N594 471 aa16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 DNAJC5GQ8N7S2 189 aa16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 FAM89AQ96GI7 184 aa16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 TAF1DQ9H5J8 278 aaPredicted RBP16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 GJA3Q9Y6H8 435 aa16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
RAB11FIP3-207ENST00000461009 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
RAB11FIP3-207ENST00000461009 EAPPQ56P03 285 aaPredicted RBP16.88■□□□□ 0.29
RAB11FIP3-207ENST00000461009 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
RAB11FIP3-207ENST00000461009 KLRG1Q96E93 195 aa16.88■□□□□ 0.29
RAB11FIP3-207ENST00000461009 CEP350Q5VT06 3117 aa16.88■□□□□ 0.29
RAB11FIP3-207ENST00000461009 SCN4AP35499 1836 aa16.88■□□□□ 0.29
RAB11FIP3-207ENST00000461009 IRS4O14654 1257 aaPredicted RBP16.87■□□□□ 0.29
RAB11FIP3-207ENST00000461009 EPHX2P34913 555 aa16.87■□□□□ 0.29
RAB11FIP3-207ENST00000461009 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
RAB11FIP3-207ENST00000461009 FLIIQ13045 1269 aa16.87■□□□□ 0.29
RAB11FIP3-207ENST00000461009 ZBTB38Q8NAP3 1195 aaPredicted RBP16.87■□□□□ 0.29
RAB11FIP3-207ENST00000461009 CCDC191Q8NCU4 936 aa16.87■□□□□ 0.29
RAB11FIP3-207ENST00000461009 MYD88Q99836 296 aa16.87■□□□□ 0.29
RAB11FIP3-207ENST00000461009 HTRA3P83110 453 aa16.86■□□□□ 0.29
RAB11FIP3-207ENST00000461009 FKBP5Q13451 457 aaPredicted RBP16.86■□□□□ 0.29
RAB11FIP3-207ENST00000461009 SF3B3Q15393 1217 aaKnown RBP16.86■□□□□ 0.29
RAB11FIP3-207ENST00000461009 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
RAB11FIP3-207ENST00000461009 METTL22Q9BUU2 404 aaPredicted RBP16.86■□□□□ 0.29
RAB11FIP3-207ENST00000461009 RTFDC1Q9BY42 306 aaPredicted RBP16.86■□□□□ 0.29
RAB11FIP3-207ENST00000461009 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
RAB11FIP3-207ENST00000461009 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
RAB11FIP3-207ENST00000461009 AOC3Q16853 763 aa16.85■□□□□ 0.29
RAB11FIP3-207ENST00000461009 G2E3Q7L622 706 aa16.85■□□□□ 0.29
RAB11FIP3-207ENST00000461009 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
RAB11FIP3-207ENST00000461009 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
RAB11FIP3-207ENST00000461009 MAP3K2Q9Y2U5 619 aa16.85■□□□□ 0.29
RAB11FIP3-207ENST00000461009 ZBED9Q6R2W3 1325 aa16.85■□□□□ 0.29
RAB11FIP3-207ENST00000461009 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
RAB11FIP3-207ENST00000461009 ZNRF3Q9ULT6 936 aa16.84■□□□□ 0.29
RAB11FIP3-207ENST00000461009 CCDC152Q4G0S7 254 aa16.83■□□□□ 0.28
RAB11FIP3-207ENST00000461009 PCCAP05165 728 aaPredicted RBP16.82■□□□□ 0.28
RAB11FIP3-207ENST00000461009 POTEIP0CG38 1075 aa16.82■□□□□ 0.28
RAB11FIP3-207ENST00000461009 POTEJP0CG39 1038 aa16.82■□□□□ 0.28
RAB11FIP3-207ENST00000461009 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
RAB11FIP3-207ENST00000461009 KIAA2012Q0VF49 1180 aa16.82■□□□□ 0.28
RAB11FIP3-207ENST00000461009 TNIP1Q15025 636 aa16.82■□□□□ 0.28
RAB11FIP3-207ENST00000461009 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
RAB11FIP3-207ENST00000461009 NSFL1CQ9UNZ2 370 aaKnown RBP16.82■□□□□ 0.28
RAB11FIP3-207ENST00000461009 LAMB2P55268 1798 aa16.82■□□□□ 0.28
RAB11FIP3-207ENST00000461009 PDE8AO60658 829 aa16.81■□□□□ 0.28
RAB11FIP3-207ENST00000461009 DNAAF4Q8WXU2 420 aa16.81■□□□□ 0.28
RAB11FIP3-207ENST00000461009 EYA3Q99504 573 aa16.81■□□□□ 0.28
RAB11FIP3-207ENST00000461009 C6orf229H3BNL8 230 aa16.8■□□□□ 0.28
RAB11FIP3-207ENST00000461009 WASHC4Q2M389 1173 aa16.8■□□□□ 0.28
RAB11FIP3-207ENST00000461009 CIAPIN1Q6FI81 312 aa16.8■□□□□ 0.28
RAB11FIP3-207ENST00000461009 USP50Q70EL3 339 aaPredicted RBP16.8■□□□□ 0.28
RAB11FIP3-207ENST00000461009 MRPL50Q8N5N7 158 aaKnown RBP16.8■□□□□ 0.28
RAB11FIP3-207ENST00000461009 JMYQ8N9B5 988 aa16.8■□□□□ 0.28
RAB11FIP3-207ENST00000461009 SSH1Q8WYL5 1049 aa16.8■□□□□ 0.28
RAB11FIP3-207ENST00000461009 CELF1Q92879 486 aaKnown RBP16.8■□□□□ 0.28
RAB11FIP3-207ENST00000461009 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
RAB11FIP3-207ENST00000461009 G3V3G9 751 aa16.79■□□□□ 0.28
RAB11FIP3-207ENST00000461009 DCAF8Q5TAQ9 597 aa16.79■□□□□ 0.28
RAB11FIP3-207ENST00000461009 CNTROBQ8N137 903 aa16.79■□□□□ 0.28
RAB11FIP3-207ENST00000461009 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
RAB11FIP3-207ENST00000461009 DDX60Q8IY21 1712 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-207ENST00000461009 PTPRCP08575 1304 aa16.78■□□□□ 0.28
RAB11FIP3-207ENST00000461009 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
RAB11FIP3-207ENST00000461009 CXCL9Q07325 125 aa16.78■□□□□ 0.28
RAB11FIP3-207ENST00000461009 LINS1Q8NG48 757 aa16.78■□□□□ 0.28
RAB11FIP3-207ENST00000461009 ADARB2Q9NS39 739 aaKnown RBP16.78■□□□□ 0.28
RAB11FIP3-207ENST00000461009 ANKIB1Q9P2G1 1089 aa16.78■□□□□ 0.28
RAB11FIP3-207ENST00000461009 CDHR2Q9BYE9 1310 aa16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 NEURL1BA8MQ27 555 aa16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 IGKV5-2P06315 115 aa16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 EPS15P42566 896 aa16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 SCNN1DP51172 638 aa16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 MAP1SQ66K74 1059 aaPredicted RBP16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 SLC51AQ86UW1 340 aa16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 ANKRD18AQ8IVF6 992 aa16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 CDC5LQ99459 802 aaKnown RBP16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 ZC3H12CQ9C0D7 883 aaKnown RBP16.77■□□□□ 0.28
RAB11FIP3-207ENST00000461009 PASKQ96RG2 1323 aa16.76■□□□□ 0.27
RAB11FIP3-207ENST00000461009 F6X3S4 739 aa16.76■□□□□ 0.27
RAB11FIP3-207ENST00000461009 RAD17O75943 681 aa16.76■□□□□ 0.27
RAB11FIP3-207ENST00000461009 ITGBL1O95965 494 aaPredicted RBP16.76■□□□□ 0.27
RAB11FIP3-207ENST00000461009 RARSP54136 660 aaKnown RBP16.76■□□□□ 0.27
RAB11FIP3-207ENST00000461009 BRPF1P55201 1214 aaPredicted RBP16.76■□□□□ 0.27
RAB11FIP3-207ENST00000461009 GPSM2P81274 684 aa16.76■□□□□ 0.27
RAB11FIP3-207ENST00000461009 GPRC5DQ9NZD1 345 aa16.76■□□□□ 0.27
RAB11FIP3-207ENST00000461009 COL4A5P29400 1685 aa16.75■□□□□ 0.27
RAB11FIP3-207ENST00000461009 H7C1D1 291 aa16.75■□□□□ 0.27
RAB11FIP3-207ENST00000461009 RIMBP2O15034 1052 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms