RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 IFIT5Q13325 482 aaKnown RBP29.98■■■□□ 2.39
U2AF1-204ENST00000459639 AACSQ86V21 672 aa29.98■■■□□ 2.39
U2AF1-204ENST00000459639 PROM2Q8N271 834 aa29.98■■■□□ 2.39
U2AF1-204ENST00000459639 EYA2O00167 538 aa29.97■■■□□ 2.39
U2AF1-204ENST00000459639 PHF14O94880 888 aa29.97■■■□□ 2.39
U2AF1-204ENST00000459639 IFIT2P09913 472 aaKnown RBP29.97■■■□□ 2.39
U2AF1-204ENST00000459639 IL15P40933 162 aaPredicted RBP29.97■■■□□ 2.39
U2AF1-204ENST00000459639 TBC1D9BQ66K14 1250 aa29.97■■■□□ 2.39
U2AF1-204ENST00000459639 AK9Q5TCS8 1911 aa29.97■■■□□ 2.39
U2AF1-204ENST00000459639 LRP5O75197 1615 aa29.96■■■□□ 2.39
U2AF1-204ENST00000459639 FAM177BA6PVY3 158 aa29.96■■■□□ 2.39
U2AF1-204ENST00000459639 CDC45O75419 566 aa29.96■■■□□ 2.39
U2AF1-204ENST00000459639 SSFA2P28290 1259 aa29.96■■■□□ 2.39
U2AF1-204ENST00000459639 ATG9AQ7Z3C6 839 aa29.96■■■□□ 2.39
U2AF1-204ENST00000459639 GPATCH3Q96I76 525 aa29.96■■■□□ 2.39
U2AF1-204ENST00000459639 SDSP20132 328 aa29.95■■■□□ 2.39
U2AF1-204ENST00000459639 TSHZ3Q63HK5 1081 aa29.95■■■□□ 2.39
U2AF1-204ENST00000459639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.95■■■□□ 2.39
U2AF1-204ENST00000459639 SEC24BO95487 1268 aa29.95■■■□□ 2.38
U2AF1-204ENST00000459639 TFCP2Q12800 502 aa29.95■■■□□ 2.38
U2AF1-204ENST00000459639 EAF2Q96CJ1 260 aaPredicted RBP29.95■■■□□ 2.38
U2AF1-204ENST00000459639 ZNF594Q96JF6 807 aaPredicted RBP29.95■■■□□ 2.38
U2AF1-204ENST00000459639 GREM2Q9H772 168 aa29.95■■■□□ 2.38
U2AF1-204ENST00000459639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.94■■■□□ 2.38
U2AF1-204ENST00000459639 PI4K2BQ8TCG2 481 aa29.94■■■□□ 2.38
U2AF1-204ENST00000459639 ANKRD18BA2A2Z9 1011 aa29.93■■■□□ 2.38
U2AF1-204ENST00000459639 ITGA6P23229 1130 aa29.93■■■□□ 2.38
U2AF1-204ENST00000459639 TAF7LQ5H9L4 462 aa29.93■■■□□ 2.38
U2AF1-204ENST00000459639 CCDC85AQ96PX6 553 aaPredicted RBP29.93■■■□□ 2.38
U2AF1-204ENST00000459639 SETDB2Q96T68 719 aa29.93■■■□□ 2.38
U2AF1-204ENST00000459639 NYXQ9GZU5 481 aa29.93■■■□□ 2.38
U2AF1-204ENST00000459639 RTL9Q8NET4 1388 aa29.93■■■□□ 2.38
U2AF1-204ENST00000459639 HCLS1P14317 486 aaPredicted RBP29.92■■■□□ 2.38
U2AF1-204ENST00000459639 TNNI3KQ59H18 835 aa29.92■■■□□ 2.38
U2AF1-204ENST00000459639 GPR108Q9NPR9 543 aa29.92■■■□□ 2.38
U2AF1-204ENST00000459639 ECHDC1Q9NTX5 307 aa29.92■■■□□ 2.38
U2AF1-204ENST00000459639 FPGT-TNNI3KV9GXZ4 949 aa29.92■■■□□ 2.38
U2AF1-204ENST00000459639 ERC2O15083 957 aa29.91■■■□□ 2.38
U2AF1-204ENST00000459639 TBC1D9Q6ZT07 1266 aa29.91■■■□□ 2.38
U2AF1-204ENST00000459639 UPF2Q9HAU5 1272 aaKnown RBP29.91■■■□□ 2.38
U2AF1-204ENST00000459639 BICDL1Q6ZP65 573 aa29.91■■■□□ 2.38
U2AF1-204ENST00000459639 GLRX3O76003 335 aaKnown RBP29.9■■■□□ 2.38
U2AF1-204ENST00000459639 LRRC24Q50LG9 513 aa29.9■■■□□ 2.38
U2AF1-204ENST00000459639 ZNF609O15014 1411 aa29.89■■■□□ 2.37
U2AF1-204ENST00000459639 EIF5BO60841 1220 aaKnown RBP29.88■■■□□ 2.37
U2AF1-204ENST00000459639 ANP32AP39687 249 aaKnown RBP29.88■■■□□ 2.37
U2AF1-204ENST00000459639 CCDC152Q4G0S7 254 aa29.88■■■□□ 2.37
U2AF1-204ENST00000459639 PUS3Q9BZE2 481 aaKnown RBP29.88■■■□□ 2.37
U2AF1-204ENST00000459639 CCDC8Q9H0W5 538 aaPredicted RBP29.88■■■□□ 2.37
U2AF1-204ENST00000459639 ERFEQ4G0M1 354 aa29.88■■■□□ 2.37
U2AF1-204ENST00000459639 CARMIL3Q8ND23 1372 aa29.87■■■□□ 2.37
U2AF1-204ENST00000459639 SLC10A5Q5PT55 438 aa29.87■■■□□ 2.37
U2AF1-204ENST00000459639 CASC1Q6TDU7 716 aa29.87■■■□□ 2.37
U2AF1-204ENST00000459639 TLR7Q9NYK1 1049 aaKnown RBP29.87■■■□□ 2.37
U2AF1-204ENST00000459639 NBPF5PQ86XG9 351 aaPredicted RBP29.86■■■□□ 2.37
U2AF1-204ENST00000459639 RIC1Q4ADV7 1423 aa29.86■■■□□ 2.37
U2AF1-204ENST00000459639 SPEF2Q9C093 1822 aa29.85■■■□□ 2.37
U2AF1-204ENST00000459639 CEP126Q9P2H0 1117 aa29.85■■■□□ 2.37
U2AF1-204ENST00000459639 ABCC12Q96J65 1359 aa29.85■■■□□ 2.37
U2AF1-204ENST00000459639 TRIM6-TRIM34B2RNG4 842 aa29.85■■■□□ 2.37
U2AF1-204ENST00000459639 AKT1S1Q96B36 256 aa29.85■■■□□ 2.37
U2AF1-204ENST00000459639 DBNLQ9UJU6 430 aaKnown RBP29.85■■■□□ 2.37
U2AF1-204ENST00000459639 GTF2E1P29083 439 aaPredicted RBP29.84■■■□□ 2.37
U2AF1-204ENST00000459639 MFAP1P55081 439 aaKnown RBP29.84■■■□□ 2.37
U2AF1-204ENST00000459639 TPTE2Q6XPS3 522 aa29.84■■■□□ 2.37
U2AF1-204ENST00000459639 LDHAL6AQ6ZMR3 332 aa29.84■■■□□ 2.37
U2AF1-204ENST00000459639 GYS1P13807 737 aa29.83■■■□□ 2.37
U2AF1-204ENST00000459639 ZNF827Q17R98 1081 aa29.83■■■□□ 2.37
U2AF1-204ENST00000459639 RIPOR2Q9Y4F9 1068 aa29.83■■■□□ 2.37
U2AF1-204ENST00000459639 NFIXQ14938 502 aa29.82■■■□□ 2.36
U2AF1-204ENST00000459639 SF3B3Q15393 1217 aaKnown RBP29.82■■■□□ 2.36
U2AF1-204ENST00000459639 CNTROBQ8N137 903 aa29.82■■■□□ 2.36
U2AF1-204ENST00000459639 RILPL2Q969X0 211 aa29.82■■■□□ 2.36
U2AF1-204ENST00000459639 AKAP2Q9Y2D5 859 aa29.82■■■□□ 2.36
U2AF1-204ENST00000459639 CNNM1Q9NRU3 951 aa29.81■■■□□ 2.36
U2AF1-204ENST00000459639 TBC1D32Q96NH3 1257 aa29.8■■■□□ 2.36
U2AF1-204ENST00000459639 DBNDD2Q9BQY9 259 aa29.8■■■□□ 2.36
U2AF1-204ENST00000459639 TFCP2L1Q9NZI6 479 aa29.8■■■□□ 2.36
U2AF1-204ENST00000459639 ATP5JP18859 108 aa29.79■■■□□ 2.36
U2AF1-204ENST00000459639 FLAD1Q8NFF5 587 aa29.79■■■□□ 2.36
U2AF1-204ENST00000459639 ARAP2Q8WZ64 1704 aa29.79■■■□□ 2.36
U2AF1-204ENST00000459639 TNRC6CQ9HCJ0 1690 aaKnown RBP29.78■■■□□ 2.36
U2AF1-204ENST00000459639 A0A1B0GUL7 405 aa29.78■■■□□ 2.36
U2AF1-204ENST00000459639 METTL24Q5JXM2 366 aa29.78■■■□□ 2.36
U2AF1-204ENST00000459639 MROH5Q6ZUA9 1318 aa29.77■■■□□ 2.36
U2AF1-204ENST00000459639 QSER1Q2KHR3 1735 aa29.77■■■□□ 2.36
U2AF1-204ENST00000459639 CDC5LQ99459 802 aaKnown RBP29.77■■■□□ 2.36
U2AF1-204ENST00000459639 SEC31BQ9NQW1 1179 aa29.77■■■□□ 2.36
U2AF1-204ENST00000459639 IGHMBP2P38935 993 aaKnown RBP29.76■■■□□ 2.36
U2AF1-204ENST00000459639 NEUROD6Q96NK8 337 aa29.76■■■□□ 2.36
U2AF1-204ENST00000459639 A0A1B0GUL6 1792 aa29.76■■■□□ 2.35
U2AF1-204ENST00000459639 MAP4K4O95819 1239 aaPredicted RBP29.76■■■□□ 2.35
U2AF1-204ENST00000459639 C3orf67Q6ZVT6 689 aa29.76■■■□□ 2.35
U2AF1-204ENST00000459639 VGLL2Q8N8G2 317 aa29.76■■■□□ 2.35
U2AF1-204ENST00000459639 NLRP3Q96P20 1036 aa29.76■■■□□ 2.35
U2AF1-204ENST00000459639 MPHOSPH8Q99549 860 aa29.76■■■□□ 2.35
U2AF1-204ENST00000459639 CHMLP26374 656 aa29.75■■■□□ 2.35
U2AF1-204ENST00000459639 TM4SF1P30408 202 aa29.75■■■□□ 2.35
U2AF1-204ENST00000459639 TIMM10P62072 90 aa29.75■■■□□ 2.35
U2AF1-204ENST00000459639 EVI5LQ96CN4 794 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms