RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
TOP3B-212ENST00000456075 ATP6V0A2Q9Y487 856 aa13.12□□□□□ -0.31
TOP3B-212ENST00000456075 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
TOP3B-212ENST00000456075 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
TOP3B-212ENST00000456075 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
TOP3B-212ENST00000456075 ZNF277Q9NRM2 450 aaPredicted RBP13.11□□□□□ -0.31
TOP3B-212ENST00000456075 C9orf78Q9NZ63 289 aaPredicted RBP13.11□□□□□ -0.31
TOP3B-212ENST00000456075 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
TOP3B-212ENST00000456075 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
TOP3B-212ENST00000456075 H7C1W4 665 aa13.1□□□□□ -0.31
TOP3B-212ENST00000456075 CTSWP56202 376 aa13.1□□□□□ -0.31
TOP3B-212ENST00000456075 BEND3Q5T5X7 828 aa13.1□□□□□ -0.31
TOP3B-212ENST00000456075 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
TOP3B-212ENST00000456075 DPP8Q6V1X1 898 aaPredicted RBP13.1□□□□□ -0.31
TOP3B-212ENST00000456075 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
TOP3B-212ENST00000456075 SUPT20HQ8NEM7 779 aa13.1□□□□□ -0.31
TOP3B-212ENST00000456075 PSMD1Q99460 953 aa13.1□□□□□ -0.31
TOP3B-212ENST00000456075 LAMB2P55268 1798 aa13.09□□□□□ -0.31
TOP3B-212ENST00000456075 ALDH1L1O75891 902 aa13.09□□□□□ -0.31
TOP3B-212ENST00000456075 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
TOP3B-212ENST00000456075 RPS8P62241 208 aaKnown RBP13.09□□□□□ -0.31
TOP3B-212ENST00000456075 MPNDQ8N594 471 aa13.09□□□□□ -0.31
TOP3B-212ENST00000456075 JDP2Q8WYK2 163 aa13.09□□□□□ -0.31
TOP3B-212ENST00000456075 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
TOP3B-212ENST00000456075 FER1L6Q2WGJ9 1857 aa13.08□□□□□ -0.32
TOP3B-212ENST00000456075 GRM8O00222 908 aa13.08□□□□□ -0.32
TOP3B-212ENST00000456075 PRELPP51888 382 aa13.08□□□□□ -0.32
TOP3B-212ENST00000456075 ANKRD18AQ8IVF6 992 aa13.08□□□□□ -0.32
TOP3B-212ENST00000456075 LARGE2Q8N3Y3 721 aa13.08□□□□□ -0.32
TOP3B-212ENST00000456075 CELF1Q92879 486 aaKnown RBP13.08□□□□□ -0.32
TOP3B-212ENST00000456075 CHMP3Q9Y3E7 222 aa13.08□□□□□ -0.32
TOP3B-212ENST00000456075 KIF16BQ96L93 1317 aa13.08□□□□□ -0.32
TOP3B-212ENST00000456075 PPIP5K2O43314 1243 aa13.07□□□□□ -0.32
TOP3B-212ENST00000456075 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
TOP3B-212ENST00000456075 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
TOP3B-212ENST00000456075 TTLL11Q8NHH1 800 aa13.07□□□□□ -0.32
TOP3B-212ENST00000456075 API5Q9BZZ5 524 aaKnown RBP13.07□□□□□ -0.32
TOP3B-212ENST00000456075 SEC31BQ9NQW1 1179 aa13.07□□□□□ -0.32
TOP3B-212ENST00000456075 NOB1Q9ULX3 412 aaKnown RBP13.07□□□□□ -0.32
TOP3B-212ENST00000456075 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
TOP3B-212ENST00000456075 SBF1O95248 1867 aa13.07□□□□□ -0.32
TOP3B-212ENST00000456075 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
TOP3B-212ENST00000456075 GLTPD2A6NH11 291 aa13.06□□□□□ -0.32
TOP3B-212ENST00000456075 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
TOP3B-212ENST00000456075 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
TOP3B-212ENST00000456075 NIM1KQ8IY84 436 aa13.06□□□□□ -0.32
TOP3B-212ENST00000456075 PLA2G12BQ9BX93 195 aa13.06□□□□□ -0.32
TOP3B-212ENST00000456075 GREM2Q9H772 168 aa13.06□□□□□ -0.32
TOP3B-212ENST00000456075 ANKIB1Q9P2G1 1089 aa13.06□□□□□ -0.32
TOP3B-212ENST00000456075 C6orf229H3BNL8 230 aa13.05□□□□□ -0.32
TOP3B-212ENST00000456075 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
TOP3B-212ENST00000456075 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
TOP3B-212ENST00000456075 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
TOP3B-212ENST00000456075 MPHOSPH8Q99549 860 aa13.05□□□□□ -0.32
TOP3B-212ENST00000456075 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
TOP3B-212ENST00000456075 ANKRD18BA2A2Z9 1011 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 ITGA6P23229 1130 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
TOP3B-212ENST00000456075 CASP7P55210 303 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 IFIT5Q13325 482 aaKnown RBP13.04□□□□□ -0.32
TOP3B-212ENST00000456075 AOC3Q16853 763 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 FAM161AQ3B820 660 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 TAF7LQ5H9L4 462 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 EYA3Q99504 573 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
TOP3B-212ENST00000456075 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 RTL9Q8NET4 1388 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 CCDC88AQ3V6T2 1871 aa13.04□□□□□ -0.32
TOP3B-212ENST00000456075 G3V3G9 751 aa13.03□□□□□ -0.32
TOP3B-212ENST00000456075 GPSM2P81274 684 aa13.03□□□□□ -0.32
TOP3B-212ENST00000456075 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
TOP3B-212ENST00000456075 CCDC57Q2TAC2 916 aa13.03□□□□□ -0.32
TOP3B-212ENST00000456075 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
TOP3B-212ENST00000456075 LMBR1LQ6UX01 489 aa13.03□□□□□ -0.32
TOP3B-212ENST00000456075 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
TOP3B-212ENST00000456075 GGA1Q9UJY5 639 aa13.03□□□□□ -0.32
TOP3B-212ENST00000456075 SNED1Q8TER0 1413 aa13.03□□□□□ -0.32
TOP3B-212ENST00000456075 UFL1O94874 794 aa13.02□□□□□ -0.33
TOP3B-212ENST00000456075 CSF1RP07333 972 aa13.02□□□□□ -0.33
TOP3B-212ENST00000456075 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-212ENST00000456075 ARHGAP45Q92619 1136 aa13.02□□□□□ -0.33
TOP3B-212ENST00000456075 BSDC1Q9NW68 430 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-212ENST00000456075 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.33
TOP3B-212ENST00000456075 GJA3Q9Y6H8 435 aa13.02□□□□□ -0.33
TOP3B-212ENST00000456075 XDHP47989 1333 aa13.02□□□□□ -0.33
TOP3B-212ENST00000456075 TAF1P21675 1872 aa13.02□□□□□ -0.33
TOP3B-212ENST00000456075 MYH3P11055 1940 aa13.01□□□□□ -0.33
TOP3B-212ENST00000456075 DICER1Q9UPY3 1922 aaKnown RBP13.01□□□□□ -0.33
TOP3B-212ENST00000456075 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
TOP3B-212ENST00000456075 BCAR3O75815 825 aa13.01□□□□□ -0.33
TOP3B-212ENST00000456075 DDNO94850 711 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-212ENST00000456075 NBPF7P0C2Y1 421 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-212ENST00000456075 FOXO4P98177 505 aa13.01□□□□□ -0.33
TOP3B-212ENST00000456075 KIAA2012Q0VF49 1180 aa13.01□□□□□ -0.33
TOP3B-212ENST00000456075 ZC3H12CQ9C0D7 883 aaKnown RBP13.01□□□□□ -0.33
TOP3B-212ENST00000456075 LRRC37AA6NMS7 1700 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 ZNF541Q9H0D2 1346 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 IQCA1LA6NCM1 817 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms