RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 EPHX2P34913 555 aa15.42■□□□□ 0.06
PDGFB-204ENST00000455790 EIF6P56537 245 aaKnown RBP15.42■□□□□ 0.06
PDGFB-204ENST00000455790 EAPPQ56P03 285 aaPredicted RBP15.42■□□□□ 0.06
PDGFB-204ENST00000455790 DPP8Q6V1X1 898 aaPredicted RBP15.42■□□□□ 0.06
PDGFB-204ENST00000455790 SP8Q8IXZ3 490 aa15.42■□□□□ 0.06
PDGFB-204ENST00000455790 NIM1KQ8IY84 436 aa15.42■□□□□ 0.06
PDGFB-204ENST00000455790 CELF1Q92879 486 aaKnown RBP15.42■□□□□ 0.06
PDGFB-204ENST00000455790 RTFDC1Q9BY42 306 aaPredicted RBP15.42■□□□□ 0.06
PDGFB-204ENST00000455790 SCNN1DP51172 638 aa15.41■□□□□ 0.06
PDGFB-204ENST00000455790 SF3B3Q15393 1217 aaKnown RBP15.41■□□□□ 0.06
PDGFB-204ENST00000455790 CCDC30Q5VVM6 783 aa15.41■□□□□ 0.06
PDGFB-204ENST00000455790 JMYQ8N9B5 988 aa15.41■□□□□ 0.06
PDGFB-204ENST00000455790 JARID2Q92833 1246 aaPredicted RBP15.41■□□□□ 0.06
PDGFB-204ENST00000455790 MPNDQ8N594 471 aa15.4■□□□□ 0.06
PDGFB-204ENST00000455790 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
PDGFB-204ENST00000455790 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
PDGFB-204ENST00000455790 SALL2Q9Y467 1007 aaPredicted RBP15.4■□□□□ 0.06
PDGFB-204ENST00000455790 PASKQ96RG2 1323 aa15.4■□□□□ 0.06
PDGFB-204ENST00000455790 FANCIQ9NVI1 1328 aa15.4■□□□□ 0.06
PDGFB-204ENST00000455790 EPS15P42566 896 aa15.39■□□□□ 0.05
PDGFB-204ENST00000455790 METTL22Q9BUU2 404 aaPredicted RBP15.39■□□□□ 0.05
PDGFB-204ENST00000455790 MAP3K2Q9Y2U5 619 aa15.39■□□□□ 0.05
PDGFB-204ENST00000455790 IL16Q14005 1332 aa15.39■□□□□ 0.05
PDGFB-204ENST00000455790 ITGBL1O95965 494 aaPredicted RBP15.38■□□□□ 0.05
PDGFB-204ENST00000455790 KIAA2012Q0VF49 1180 aa15.38■□□□□ 0.05
PDGFB-204ENST00000455790 TWISTNBQ3B726 338 aaPredicted RBP15.38■□□□□ 0.05
PDGFB-204ENST00000455790 MAP1SQ66K74 1059 aaPredicted RBP15.38■□□□□ 0.05
PDGFB-204ENST00000455790 G2E3Q7L622 706 aa15.38■□□□□ 0.05
PDGFB-204ENST00000455790 SUPT20HQ8NEM7 779 aa15.38■□□□□ 0.05
PDGFB-204ENST00000455790 SEC31BQ9NQW1 1179 aa15.38■□□□□ 0.05
PDGFB-204ENST00000455790 PI4KAP2A4QPH2 592 aa15.37■□□□□ 0.05
PDGFB-204ENST00000455790 DDX58O95786 925 aaKnown RBP15.37■□□□□ 0.05
PDGFB-204ENST00000455790 PCCAP05165 728 aaPredicted RBP15.37■□□□□ 0.05
PDGFB-204ENST00000455790 IGKV5-2P06315 115 aa15.37■□□□□ 0.05
PDGFB-204ENST00000455790 CXCL9Q07325 125 aa15.37■□□□□ 0.05
PDGFB-204ENST00000455790 PI4KAP1Q8N8J0 262 aa15.37■□□□□ 0.05
PDGFB-204ENST00000455790 CCDC191Q8NCU4 936 aa15.37■□□□□ 0.05
PDGFB-204ENST00000455790 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
PDGFB-204ENST00000455790 CREBZFQ9NS37 354 aa15.37■□□□□ 0.05
PDGFB-204ENST00000455790 CWC25Q9NXE8 425 aaPredicted RBP15.37■□□□□ 0.05
PDGFB-204ENST00000455790 ZNRF3Q9ULT6 936 aa15.37■□□□□ 0.05
PDGFB-204ENST00000455790 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
PDGFB-204ENST00000455790 YDJCA8MPS7 323 aa15.36■□□□□ 0.05
PDGFB-204ENST00000455790 RAD17O75943 681 aa15.36■□□□□ 0.05
PDGFB-204ENST00000455790 LMOD1P29536 600 aaPredicted RBP15.36■□□□□ 0.05
PDGFB-204ENST00000455790 GPSM2P81274 684 aa15.36■□□□□ 0.05
PDGFB-204ENST00000455790 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
PDGFB-204ENST00000455790 KSR2Q6VAB6 950 aa15.36■□□□□ 0.05
PDGFB-204ENST00000455790 TMC4Q7Z404 712 aa15.36■□□□□ 0.05
PDGFB-204ENST00000455790 PNMA8AQ86V59 439 aaPredicted RBP15.36■□□□□ 0.05
PDGFB-204ENST00000455790 GPR101Q96P66 508 aaPredicted RBP15.36■□□□□ 0.05
PDGFB-204ENST00000455790 CCDC85AQ96PX6 553 aaPredicted RBP15.36■□□□□ 0.05
PDGFB-204ENST00000455790 STK31Q9BXU1 1019 aa15.36■□□□□ 0.05
PDGFB-204ENST00000455790 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
PDGFB-204ENST00000455790 MKRN1Q9UHC7 482 aaKnown RBP15.36■□□□□ 0.05
PDGFB-204ENST00000455790 GMPSP49915 693 aaPredicted RBP15.35■□□□□ 0.05
PDGFB-204ENST00000455790 CWF19L2Q2TBE0 894 aaKnown RBP15.35■□□□□ 0.05
PDGFB-204ENST00000455790 POLLQ9UGP5 575 aa15.35■□□□□ 0.05
PDGFB-204ENST00000455790 NSFL1CQ9UNZ2 370 aaKnown RBP15.35■□□□□ 0.05
PDGFB-204ENST00000455790 RPS8P62241 208 aaKnown RBP15.34■□□□□ 0.05
PDGFB-204ENST00000455790 FMR1Q06787 632 aaKnown RBP eCLIP15.34■□□□□ 0.05
PDGFB-204ENST00000455790 FAM9BQ8IZU0 186 aa15.34■□□□□ 0.05
PDGFB-204ENST00000455790 CNTROBQ8N137 903 aa15.34■□□□□ 0.05
PDGFB-204ENST00000455790 GPRC5DQ9NZD1 345 aa15.34■□□□□ 0.05
PDGFB-204ENST00000455790 SHTN1A0MZ66 631 aa15.33■□□□□ 0.04
PDGFB-204ENST00000455790 PDE8AO60658 829 aa15.33■□□□□ 0.04
PDGFB-204ENST00000455790 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
PDGFB-204ENST00000455790 CIAPIN1Q6FI81 312 aa15.33■□□□□ 0.04
PDGFB-204ENST00000455790 WDR63Q8IWG1 891 aa15.33■□□□□ 0.04
PDGFB-204ENST00000455790 CHMP4AQ9BY43 222 aa15.33■□□□□ 0.04
PDGFB-204ENST00000455790 DBNDD1Q9H9R9 158 aa15.33■□□□□ 0.04
PDGFB-204ENST00000455790 CDHR2Q9BYE9 1310 aa15.33■□□□□ 0.04
PDGFB-204ENST00000455790 CNTNAP1P78357 1384 aa15.33■□□□□ 0.04
PDGFB-204ENST00000455790 NEURL1BA8MQ27 555 aa15.32■□□□□ 0.04
PDGFB-204ENST00000455790 C6orf229H3BNL8 230 aa15.32■□□□□ 0.04
PDGFB-204ENST00000455790 RIMBP2O15034 1052 aa15.32■□□□□ 0.04
PDGFB-204ENST00000455790 VAMP4O75379 141 aa15.32■□□□□ 0.04
PDGFB-204ENST00000455790 CTSWP56202 376 aa15.32■□□□□ 0.04
PDGFB-204ENST00000455790 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
PDGFB-204ENST00000455790 FLIIQ13045 1269 aa15.32■□□□□ 0.04
PDGFB-204ENST00000455790 WASHC4Q2M389 1173 aa15.32■□□□□ 0.04
PDGFB-204ENST00000455790 CCDC152Q4G0S7 254 aa15.32■□□□□ 0.04
PDGFB-204ENST00000455790 TBC1D16Q8TBP0 767 aa15.32■□□□□ 0.04
PDGFB-204ENST00000455790 TMEM88BA6NKF7 163 aa15.31■□□□□ 0.04
PDGFB-204ENST00000455790 DOK7Q18PE1 504 aa15.31■□□□□ 0.04
PDGFB-204ENST00000455790 USP50Q70EL3 339 aaPredicted RBP15.31■□□□□ 0.04
PDGFB-204ENST00000455790 ADARB2Q9NS39 739 aaKnown RBP15.31■□□□□ 0.04
PDGFB-204ENST00000455790 RTL9Q8NET4 1388 aa15.31■□□□□ 0.04
PDGFB-204ENST00000455790 TRAF5O00463 557 aa15.3■□□□□ 0.04
PDGFB-204ENST00000455790 UFL1O94874 794 aa15.3■□□□□ 0.04
PDGFB-204ENST00000455790 HSPA1AP0DMV8 641 aaKnown RBP15.3■□□□□ 0.04
PDGFB-204ENST00000455790 HSPA1BP0DMV9 641 aaKnown RBP15.3■□□□□ 0.04
PDGFB-204ENST00000455790 HSP90B1P14625 803 aaKnown RBP15.3■□□□□ 0.04
PDGFB-204ENST00000455790 NEXNQ0ZGT2 675 aa15.3■□□□□ 0.04
PDGFB-204ENST00000455790 IFFO2Q5TF58 517 aa15.3■□□□□ 0.04
PDGFB-204ENST00000455790 UBE3BQ7Z3V4 1068 aa15.3■□□□□ 0.04
PDGFB-204ENST00000455790 TRPM4Q8TD43 1214 aa15.3■□□□□ 0.04
PDGFB-204ENST00000455790 GREM2Q9H772 168 aa15.3■□□□□ 0.04
PDGFB-204ENST00000455790 KCNQ5Q9NR82 932 aa15.3■□□□□ 0.04
PDGFB-204ENST00000455790 ZBTB12Q9Y330 459 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms