RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CELF1Q92879 486 aaKnown RBP20.91■□□□□ 0.94
GPC1-206ENST00000455111 TRPM7Q96QT4 1865 aa20.91■□□□□ 0.94
GPC1-206ENST00000455111 CLEC11AQ9Y240 323 aa20.91■□□□□ 0.94
GPC1-206ENST00000455111 YDJCA8MPS7 323 aa20.9■□□□□ 0.94
GPC1-206ENST00000455111 ELL2O00472 640 aaPredicted RBP20.9■□□□□ 0.94
GPC1-206ENST00000455111 BBOX1O75936 387 aa20.9■□□□□ 0.94
GPC1-206ENST00000455111 RTL5Q5HYW3 569 aaPredicted RBP20.89■□□□□ 0.93
GPC1-206ENST00000455111 PNMA8AQ86V59 439 aaPredicted RBP20.89■□□□□ 0.93
GPC1-206ENST00000455111 NIM1KQ8IY84 436 aa20.89■□□□□ 0.93
GPC1-206ENST00000455111 IFT57Q9NWB7 429 aa20.89■□□□□ 0.93
GPC1-206ENST00000455111 THSD7BQ9C0I4 1608 aa20.89■□□□□ 0.93
GPC1-206ENST00000455111 TMEM88BA6NKF7 163 aa20.88■□□□□ 0.93
GPC1-206ENST00000455111 VEGFBP49765 207 aa20.88■□□□□ 0.93
GPC1-206ENST00000455111 KIAA2012Q0VF49 1180 aa20.88■□□□□ 0.93
GPC1-206ENST00000455111 SF3B3Q15393 1217 aaKnown RBP20.88■□□□□ 0.93
GPC1-206ENST00000455111 TSPYL6Q8N831 410 aa20.88■□□□□ 0.93
GPC1-206ENST00000455111 HYPKQ9NX55 129 aa20.88■□□□□ 0.93
GPC1-206ENST00000455111 SCN9AQ15858 1988 aa20.88■□□□□ 0.93
GPC1-206ENST00000455111 SHTN1A0MZ66 631 aa20.87■□□□□ 0.93
GPC1-206ENST00000455111 TRIM28Q13263 835 aaKnown RBP20.87■□□□□ 0.93
GPC1-206ENST00000455111 DPP8Q6V1X1 898 aaPredicted RBP20.87■□□□□ 0.93
GPC1-206ENST00000455111 DDX46Q7L014 1031 aaKnown RBP20.87■□□□□ 0.93
GPC1-206ENST00000455111 MPNDQ8N594 471 aa20.87■□□□□ 0.93
GPC1-206ENST00000455111 ZNRF3Q9ULT6 936 aa20.87■□□□□ 0.93
GPC1-206ENST00000455111 VPS33BQ9H267 617 aa20.86■□□□□ 0.93
GPC1-206ENST00000455111 GPRC5DQ9NZD1 345 aa20.86■□□□□ 0.93
GPC1-206ENST00000455111 TRAF5O00463 557 aa20.85■□□□□ 0.93
GPC1-206ENST00000455111 HIRAP54198 1017 aaPredicted RBP20.85■□□□□ 0.93
GPC1-206ENST00000455111 RASSF10A6NK89 507 aa20.84■□□□□ 0.93
GPC1-206ENST00000455111 FOXN1O15353 648 aa20.84■□□□□ 0.93
GPC1-206ENST00000455111 GMPSP49915 693 aaPredicted RBP20.84■□□□□ 0.93
GPC1-206ENST00000455111 GNAI1P63096 354 aa20.84■□□□□ 0.93
GPC1-206ENST00000455111 CST9Q5W186 159 aa20.84■□□□□ 0.93
GPC1-206ENST00000455111 JARID2Q92833 1246 aaPredicted RBP20.84■□□□□ 0.93
GPC1-206ENST00000455111 POLLQ9UGP5 575 aa20.84■□□□□ 0.93
GPC1-206ENST00000455111 ZNF646O15015 1829 aaPredicted RBP20.83■□□□□ 0.93
GPC1-206ENST00000455111 SPEF2Q9C093 1822 aa20.83■□□□□ 0.93
GPC1-206ENST00000455111 IRS4O14654 1257 aaPredicted RBP20.83■□□□□ 0.93
GPC1-206ENST00000455111 RAD17O75943 681 aa20.83■□□□□ 0.93
GPC1-206ENST00000455111 GPSM2P81274 684 aa20.83■□□□□ 0.93
GPC1-206ENST00000455111 USP50Q70EL3 339 aaPredicted RBP20.83■□□□□ 0.93
GPC1-206ENST00000455111 SUPT20HQ8NEM7 779 aa20.83■□□□□ 0.93
GPC1-206ENST00000455111 TSR2Q969E8 191 aaKnown RBP20.83■□□□□ 0.93
GPC1-206ENST00000455111 GPR101Q96P66 508 aaPredicted RBP20.83■□□□□ 0.93
GPC1-206ENST00000455111 SEC31BQ9NQW1 1179 aa20.83■□□□□ 0.93
GPC1-206ENST00000455111 LMOD1P29536 600 aaPredicted RBP20.82■□□□□ 0.92
GPC1-206ENST00000455111 MYD88Q99836 296 aa20.82■□□□□ 0.92
GPC1-206ENST00000455111 KCNQ5Q9NR82 932 aa20.82■□□□□ 0.92
GPC1-206ENST00000455111 PSME4Q14997 1843 aa20.81■□□□□ 0.92
GPC1-206ENST00000455111 CIAPIN1Q6FI81 312 aa20.81■□□□□ 0.92
GPC1-206ENST00000455111 TRPM4Q8TD43 1214 aa20.81■□□□□ 0.92
GPC1-206ENST00000455111 ADARB2Q9NS39 739 aaKnown RBP20.81■□□□□ 0.92
GPC1-206ENST00000455111 RTL9Q8NET4 1388 aa20.81■□□□□ 0.92
GPC1-206ENST00000455111 RIC3Q7Z5B4 369 aa20.8■□□□□ 0.92
GPC1-206ENST00000455111 ZBTB38Q8NAP3 1195 aaPredicted RBP20.8■□□□□ 0.92
GPC1-206ENST00000455111 PGAP2Q9UHJ9 254 aa20.8■□□□□ 0.92
GPC1-206ENST00000455111 ZBTB12Q9Y330 459 aaPredicted RBP20.8■□□□□ 0.92
GPC1-206ENST00000455111 MYH3P11055 1940 aa20.8■□□□□ 0.92
GPC1-206ENST00000455111 EGFRP00533 1210 aa20.79■□□□□ 0.92
GPC1-206ENST00000455111 IGKV5-2P06315 115 aa20.79■□□□□ 0.92
GPC1-206ENST00000455111 DLK2Q6UY11 383 aa20.79■□□□□ 0.92
GPC1-206ENST00000455111 TNS4Q8IZW8 715 aa20.79■□□□□ 0.92
GPC1-206ENST00000455111 DBNDD1Q9H9R9 158 aa20.79■□□□□ 0.92
GPC1-206ENST00000455111 POLR2AP24928 1970 aaKnown RBP20.79■□□□□ 0.92
GPC1-206ENST00000455111 DEFB115Q30KQ5 88 aa20.78■□□□□ 0.92
GPC1-206ENST00000455111 G2E3Q7L622 706 aa20.78■□□□□ 0.92
GPC1-206ENST00000455111 TMC4Q7Z404 712 aa20.78■□□□□ 0.92
GPC1-206ENST00000455111 METTL22Q9BUU2 404 aaPredicted RBP20.78■□□□□ 0.92
GPC1-206ENST00000455111 WBP1LQ9NX94 342 aa20.78■□□□□ 0.92
GPC1-206ENST00000455111 NSFL1CQ9UNZ2 370 aaKnown RBP20.78■□□□□ 0.92
GPC1-206ENST00000455111 RIMBP2O15034 1052 aa20.77■□□□□ 0.92
GPC1-206ENST00000455111 PCCAP05165 728 aaPredicted RBP20.77■□□□□ 0.92
GPC1-206ENST00000455111 GOLGA2Q08379 1002 aa20.77■□□□□ 0.92
GPC1-206ENST00000455111 WWC1Q8IX03 1113 aa20.77■□□□□ 0.92
GPC1-206ENST00000455111 TBC1D16Q8TBP0 767 aa20.77■□□□□ 0.92
GPC1-206ENST00000455111 GLIS2Q9BZE0 524 aaPredicted RBP20.77■□□□□ 0.92
GPC1-206ENST00000455111 WDR33Q9C0J8 1336 aaKnown RBP20.77■□□□□ 0.91
GPC1-206ENST00000455111 WTIPA6NIX2 430 aaPredicted RBP20.76■□□□□ 0.91
GPC1-206ENST00000455111 PSMD14O00487 310 aa20.76■□□□□ 0.91
GPC1-206ENST00000455111 RPS8P62241 208 aaKnown RBP20.76■□□□□ 0.91
GPC1-206ENST00000455111 CCDC85AQ96PX6 553 aaPredicted RBP20.76■□□□□ 0.91
GPC1-206ENST00000455111 TMX4Q9H1E5 349 aaPredicted RBP20.76■□□□□ 0.91
GPC1-206ENST00000455111 CALD1Q05682 793 aaKnown RBP20.75■□□□□ 0.91
GPC1-206ENST00000455111 DOK7Q18PE1 504 aa20.75■□□□□ 0.91
GPC1-206ENST00000455111 CCDC27Q2M243 656 aa20.75■□□□□ 0.91
GPC1-206ENST00000455111 WASHC4Q2M389 1173 aa20.75■□□□□ 0.91
GPC1-206ENST00000455111 CCDC191Q8NCU4 936 aa20.75■□□□□ 0.91
GPC1-206ENST00000455111 CNOT7Q9UIV1 285 aaKnown RBP20.75■□□□□ 0.91
GPC1-206ENST00000455111 MAP3K2Q9Y2U5 619 aa20.75■□□□□ 0.91
GPC1-206ENST00000455111 CDHR2Q9BYE9 1310 aa20.75■□□□□ 0.91
GPC1-206ENST00000455111 CAPN15O75808 1086 aa20.74■□□□□ 0.91
GPC1-206ENST00000455111 CYP4F22Q6NT55 531 aa20.74■□□□□ 0.91
GPC1-206ENST00000455111 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
GPC1-206ENST00000455111 ABT1Q9ULW3 272 aaKnown RBP20.74■□□□□ 0.91
GPC1-206ENST00000455111 PI4KAP2A4QPH2 592 aa20.73■□□□□ 0.91
GPC1-206ENST00000455111 ECE2O60344 883 aa20.73■□□□□ 0.91
GPC1-206ENST00000455111 CCDC30Q5VVM6 783 aa20.73■□□□□ 0.91
GPC1-206ENST00000455111 SAMD7Q7Z3H4 446 aa20.73■□□□□ 0.91
GPC1-206ENST00000455111 MICALL2Q8IY33 904 aa20.73■□□□□ 0.91
GPC1-206ENST00000455111 PI4KAP1Q8N8J0 262 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms