RNA–Protein interactions for RNA: ENST00000453863.5

RNF220-206, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-206ENST00000453863 C7orf43Q8WVR3 580 aa11.53□□□□□ -0.56
RNF220-206ENST00000453863 JDP2Q8WYK2 163 aa11.53□□□□□ -0.56
RNF220-206ENST00000453863 SMC4Q9NTJ3 1288 aa11.53□□□□□ -0.56
RNF220-206ENST00000453863 ATP6V0A2Q9Y487 856 aa11.53□□□□□ -0.56
RNF220-206ENST00000453863 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
RNF220-206ENST00000453863 CWF19L2Q2TBE0 894 aaKnown RBP11.52□□□□□ -0.57
RNF220-206ENST00000453863 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.57
RNF220-206ENST00000453863 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.57
RNF220-206ENST00000453863 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
RNF220-206ENST00000453863 CTSWP56202 376 aa11.51□□□□□ -0.57
RNF220-206ENST00000453863 GCKRQ14397 625 aa11.51□□□□□ -0.57
RNF220-206ENST00000453863 DPP8Q6V1X1 898 aaPredicted RBP11.51□□□□□ -0.57
RNF220-206ENST00000453863 SYNE4Q8N205 404 aa11.51□□□□□ -0.57
RNF220-206ENST00000453863 CDC5LQ99459 802 aaKnown RBP11.51□□□□□ -0.57
RNF220-206ENST00000453863 VPS33BQ9H267 617 aa11.51□□□□□ -0.57
RNF220-206ENST00000453863 KIF16BQ96L93 1317 aa11.51□□□□□ -0.57
RNF220-206ENST00000453863 SNED1Q8TER0 1413 aa11.51□□□□□ -0.57
RNF220-206ENST00000453863 GLTPD2A6NH11 291 aa11.5□□□□□ -0.57
RNF220-206ENST00000453863 ALDH1L1O75891 902 aa11.5□□□□□ -0.57
RNF220-206ENST00000453863 SLC4A10Q6U841 1118 aa11.5□□□□□ -0.57
RNF220-206ENST00000453863 SP8Q8IXZ3 490 aa11.5□□□□□ -0.57
RNF220-206ENST00000453863 MPNDQ8N594 471 aa11.5□□□□□ -0.57
RNF220-206ENST00000453863 CDCA7LQ96GN5 454 aa11.5□□□□□ -0.57
RNF220-206ENST00000453863 SRCIN1Q9C0H9 1055 aa11.5□□□□□ -0.57
RNF220-206ENST00000453863 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
RNF220-206ENST00000453863 RTL9Q8NET4 1388 aa11.5□□□□□ -0.57
RNF220-206ENST00000453863 F6X3S4 739 aa11.49□□□□□ -0.57
RNF220-206ENST00000453863 PPIP5K2O43314 1243 aa11.49□□□□□ -0.57
RNF220-206ENST00000453863 ANKRD18AQ8IVF6 992 aa11.49□□□□□ -0.57
RNF220-206ENST00000453863 NIM1KQ8IY84 436 aa11.49□□□□□ -0.57
RNF220-206ENST00000453863 TRMT2AQ8IZ69 625 aaKnown RBP11.49□□□□□ -0.57
RNF220-206ENST00000453863 LARGE2Q8N3Y3 721 aa11.49□□□□□ -0.57
RNF220-206ENST00000453863 C9orf78Q9NZ63 289 aaPredicted RBP11.49□□□□□ -0.57
RNF220-206ENST00000453863 ZBED9Q6R2W3 1325 aa11.49□□□□□ -0.57
RNF220-206ENST00000453863 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
RNF220-206ENST00000453863 IQCA1LA6NCM1 817 aa11.48□□□□□ -0.57
RNF220-206ENST00000453863 H7C1W4 665 aa11.48□□□□□ -0.57
RNF220-206ENST00000453863 GRM8O00222 908 aa11.48□□□□□ -0.57
RNF220-206ENST00000453863 EIF6P56537 245 aaKnown RBP11.48□□□□□ -0.57
RNF220-206ENST00000453863 RPS8P62241 208 aaKnown RBP11.48□□□□□ -0.57
RNF220-206ENST00000453863 BEND3Q5T5X7 828 aa11.48□□□□□ -0.57
RNF220-206ENST00000453863 OLFM4Q6UX06 510 aa11.48□□□□□ -0.57
RNF220-206ENST00000453863 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
RNF220-206ENST00000453863 SSH1Q8WYL5 1049 aa11.48□□□□□ -0.57
RNF220-206ENST00000453863 EYA3Q99504 573 aa11.48□□□□□ -0.57
RNF220-206ENST00000453863 PLA2G12BQ9BX93 195 aa11.48□□□□□ -0.57
RNF220-206ENST00000453863 SPEF2Q9C093 1822 aa11.48□□□□□ -0.57
RNF220-206ENST00000453863 TAF1P21675 1872 aa11.47□□□□□ -0.57
RNF220-206ENST00000453863 VEGFAP15692 232 aaPredicted RBP11.47□□□□□ -0.57
RNF220-206ENST00000453863 IGHMBP2P38935 993 aaKnown RBP11.47□□□□□ -0.57
RNF220-206ENST00000453863 CELF1Q92879 486 aaKnown RBP11.47□□□□□ -0.57
RNF220-206ENST00000453863 BCL2L13Q9BXK5 485 aa11.47□□□□□ -0.57
RNF220-206ENST00000453863 RTFDC1Q9BY42 306 aaPredicted RBP11.47□□□□□ -0.57
RNF220-206ENST00000453863 API5Q9BZZ5 524 aaKnown RBP11.47□□□□□ -0.57
RNF220-206ENST00000453863 NMRK2Q9NPI5 230 aa11.47□□□□□ -0.57
RNF220-206ENST00000453863 ANKIB1Q9P2G1 1089 aa11.47□□□□□ -0.57
RNF220-206ENST00000453863 SCN4AP35499 1836 aa11.46□□□□□ -0.57
RNF220-206ENST00000453863 DUOX1Q9NRD9 1551 aa11.46□□□□□ -0.57
RNF220-206ENST00000453863 XDHP47989 1333 aa11.46□□□□□ -0.57
RNF220-206ENST00000453863 TOMM70O94826 608 aa11.46□□□□□ -0.57
RNF220-206ENST00000453863 PRELPP51888 382 aa11.46□□□□□ -0.57
RNF220-206ENST00000453863 C1QTNF8P60827 252 aa11.46□□□□□ -0.57
RNF220-206ENST00000453863 TTLL11Q8NHH1 800 aa11.46□□□□□ -0.57
RNF220-206ENST00000453863 JARID2Q92833 1246 aaPredicted RBP11.46□□□□□ -0.57
RNF220-206ENST00000453863 CCDC85AQ96PX6 553 aaPredicted RBP11.46□□□□□ -0.57
RNF220-206ENST00000453863 NSFL1CQ9UNZ2 370 aaKnown RBP11.46□□□□□ -0.57
RNF220-206ENST00000453863 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
RNF220-206ENST00000453863 CHMP3Q9Y3E7 222 aa11.46□□□□□ -0.57
RNF220-206ENST00000453863 LTBP1Q14766 1721 aa11.46□□□□□ -0.58
RNF220-206ENST00000453863 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
RNF220-206ENST00000453863 KIF3CO14782 793 aa11.45□□□□□ -0.58
RNF220-206ENST00000453863 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
RNF220-206ENST00000453863 LMOD1P29536 600 aaPredicted RBP11.45□□□□□ -0.58
RNF220-206ENST00000453863 CCT4P50991 539 aaKnown RBP11.45□□□□□ -0.58
RNF220-206ENST00000453863 BRPF1P55201 1214 aaPredicted RBP11.45□□□□□ -0.58
RNF220-206ENST00000453863 KIAA2012Q0VF49 1180 aa11.45□□□□□ -0.58
RNF220-206ENST00000453863 AOC3Q16853 763 aa11.45□□□□□ -0.58
RNF220-206ENST00000453863 TAF7LQ5H9L4 462 aa11.45□□□□□ -0.58
RNF220-206ENST00000453863 GPC2Q8N158 579 aa11.45□□□□□ -0.58
RNF220-206ENST00000453863 MPHOSPH8Q99549 860 aa11.45□□□□□ -0.58
RNF220-206ENST00000453863 SEC31BQ9NQW1 1179 aa11.45□□□□□ -0.58
RNF220-206ENST00000453863 GGA1Q9UJY5 639 aa11.45□□□□□ -0.58
RNF220-206ENST00000453863 ANKRD18BA2A2Z9 1011 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 G3V3G9 751 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 FZD9O00144 591 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 UFL1O94874 794 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 ITGA6P23229 1130 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 IFIT5Q13325 482 aaKnown RBP11.44□□□□□ -0.58
RNF220-206ENST00000453863 WASHC4Q2M389 1173 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 RBM46Q8TBY0 533 aaKnown RBP11.44□□□□□ -0.58
RNF220-206ENST00000453863 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
RNF220-206ENST00000453863 GREM2Q9H772 168 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 RRAGCQ9HB90 399 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 BSDC1Q9NW68 430 aaPredicted RBP11.44□□□□□ -0.58
RNF220-206ENST00000453863 PODXL2Q9NZ53 605 aa11.44□□□□□ -0.58
RNF220-206ENST00000453863 ZNF541Q9H0D2 1346 aa11.43□□□□□ -0.58
RNF220-206ENST00000453863 RARSP54136 660 aaKnown RBP11.43□□□□□ -0.58
RNF220-206ENST00000453863 CASP7P55210 303 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms