RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 COL4A5P29400 1685 aa23.79■■□□□ 1.4
TNFRSF25-207ENST00000453260 ELL2O00472 640 aaPredicted RBP23.79■■□□□ 1.4
TNFRSF25-207ENST00000453260 HSP90B1P14625 803 aaKnown RBP23.79■■□□□ 1.4
TNFRSF25-207ENST00000453260 SLC51AQ86UW1 340 aa23.79■■□□□ 1.4
TNFRSF25-207ENST00000453260 HSPA1AP0DMV8 641 aaKnown RBP23.78■■□□□ 1.4
TNFRSF25-207ENST00000453260 HSPA1BP0DMV9 641 aaKnown RBP23.78■■□□□ 1.4
TNFRSF25-207ENST00000453260 MAP1SQ66K74 1059 aaPredicted RBP23.78■■□□□ 1.4
TNFRSF25-207ENST00000453260 ZNF428Q96B54 188 aa23.78■■□□□ 1.4
TNFRSF25-207ENST00000453260 EPS15P42566 896 aa23.77■■□□□ 1.4
TNFRSF25-207ENST00000453260 SCNN1DP51172 638 aa23.77■■□□□ 1.4
TNFRSF25-207ENST00000453260 SF3B3Q15393 1217 aaKnown RBP23.77■■□□□ 1.4
TNFRSF25-207ENST00000453260 USP50Q70EL3 339 aaPredicted RBP23.77■■□□□ 1.4
TNFRSF25-207ENST00000453260 ADAMTSL1Q8N6G6 1762 aa23.76■■□□□ 1.39
TNFRSF25-207ENST00000453260 KIAA2012Q0VF49 1180 aa23.76■■□□□ 1.39
TNFRSF25-207ENST00000453260 CCDC30Q5VVM6 783 aa23.76■■□□□ 1.39
TNFRSF25-207ENST00000453260 TAF1P21675 1872 aa23.75■■□□□ 1.39
TNFRSF25-207ENST00000453260 IRS4O14654 1257 aaPredicted RBP23.75■■□□□ 1.39
TNFRSF25-207ENST00000453260 CXCL9Q07325 125 aa23.75■■□□□ 1.39
TNFRSF25-207ENST00000453260 TNIP1Q15025 636 aa23.75■■□□□ 1.39
TNFRSF25-207ENST00000453260 COL13A1Q5TAT6 717 aaPredicted RBP23.75■■□□□ 1.39
TNFRSF25-207ENST00000453260 PHAXQ9H814 394 aaKnown RBP23.75■■□□□ 1.39
TNFRSF25-207ENST00000453260 CNTNAP1P78357 1384 aa23.75■■□□□ 1.39
TNFRSF25-207ENST00000453260 DDX58O95786 925 aaKnown RBP23.74■■□□□ 1.39
TNFRSF25-207ENST00000453260 ZEB1P37275 1124 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF25-207ENST00000453260 RTL5Q5HYW3 569 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF25-207ENST00000453260 DDX60Q8IY21 1712 aaKnown RBP23.73■■□□□ 1.39
TNFRSF25-207ENST00000453260 CIAPIN1Q6FI81 312 aa23.73■■□□□ 1.39
TNFRSF25-207ENST00000453260 ZBTB38Q8NAP3 1195 aaPredicted RBP23.73■■□□□ 1.39
TNFRSF25-207ENST00000453260 C8orf58Q8NAV2 365 aa23.73■■□□□ 1.39
TNFRSF25-207ENST00000453260 ADARB2Q9NS39 739 aaKnown RBP23.73■■□□□ 1.39
TNFRSF25-207ENST00000453260 GPRC5DQ9NZD1 345 aa23.73■■□□□ 1.39
TNFRSF25-207ENST00000453260 CCDC191Q8NCU4 936 aa23.72■■□□□ 1.39
TNFRSF25-207ENST00000453260 BCL2L13Q9BXK5 485 aa23.72■■□□□ 1.39
TNFRSF25-207ENST00000453260 NSFL1CQ9UNZ2 370 aaKnown RBP23.72■■□□□ 1.39
TNFRSF25-207ENST00000453260 WASHC4Q2M389 1173 aa23.71■■□□□ 1.39
TNFRSF25-207ENST00000453260 CELF1Q92879 486 aaKnown RBP23.71■■□□□ 1.39
TNFRSF25-207ENST00000453260 MYD88Q99836 296 aa23.71■■□□□ 1.39
TNFRSF25-207ENST00000453260 LTBP1Q14766 1721 aa23.7■■□□□ 1.39
TNFRSF25-207ENST00000453260 CDHR2Q9BYE9 1310 aa23.7■■□□□ 1.38
TNFRSF25-207ENST00000453260 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.38
TNFRSF25-207ENST00000453260 DEFB115Q30KQ5 88 aa23.7■■□□□ 1.38
TNFRSF25-207ENST00000453260 RAD17O75943 681 aa23.69■■□□□ 1.38
TNFRSF25-207ENST00000453260 VEGFBP49765 207 aa23.69■■□□□ 1.38
TNFRSF25-207ENST00000453260 GMPSP49915 693 aaPredicted RBP23.69■■□□□ 1.38
TNFRSF25-207ENST00000453260 CCDC27Q2M243 656 aa23.69■■□□□ 1.38
TNFRSF25-207ENST00000453260 TNS4Q8IZW8 715 aa23.69■■□□□ 1.38
TNFRSF25-207ENST00000453260 CWC25Q9NXE8 425 aaPredicted RBP23.69■■□□□ 1.38
TNFRSF25-207ENST00000453260 ABT1Q9ULW3 272 aaKnown RBP23.69■■□□□ 1.38
TNFRSF25-207ENST00000453260 C6orf229H3BNL8 230 aa23.68■■□□□ 1.38
TNFRSF25-207ENST00000453260 PCCAP05165 728 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF25-207ENST00000453260 EYA3Q99504 573 aa23.68■■□□□ 1.38
TNFRSF25-207ENST00000453260 METTL22Q9BUU2 404 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF25-207ENST00000453260 STK31Q9BXU1 1019 aa23.68■■□□□ 1.38
TNFRSF25-207ENST00000453260 RASSF10A6NK89 507 aa23.67■■□□□ 1.38
TNFRSF25-207ENST00000453260 CCDC152Q4G0S7 254 aa23.67■■□□□ 1.38
TNFRSF25-207ENST00000453260 AIDAQ96BJ3 306 aa23.67■■□□□ 1.38
TNFRSF25-207ENST00000453260 LRRC37AA6NMS7 1700 aa23.67■■□□□ 1.38
TNFRSF25-207ENST00000453260 CCDC184Q52MB2 194 aa23.66■■□□□ 1.38
TNFRSF25-207ENST00000453260 H7C1D1 291 aa23.65■■□□□ 1.38
TNFRSF25-207ENST00000453260 PDE8AO60658 829 aa23.65■■□□□ 1.38
TNFRSF25-207ENST00000453260 GPSM2P81274 684 aa23.65■■□□□ 1.38
TNFRSF25-207ENST00000453260 WWC1Q8IX03 1113 aa23.65■■□□□ 1.38
TNFRSF25-207ENST00000453260 TSPYL6Q8N831 410 aa23.65■■□□□ 1.38
TNFRSF25-207ENST00000453260 ZC3H15Q8WU90 426 aaKnown RBP23.65■■□□□ 1.38
TNFRSF25-207ENST00000453260 CNOT7Q9UIV1 285 aaKnown RBP23.65■■□□□ 1.38
TNFRSF25-207ENST00000453260 RIMBP2O15034 1052 aa23.64■■□□□ 1.37
TNFRSF25-207ENST00000453260 NEXNQ0ZGT2 675 aa23.64■■□□□ 1.37
TNFRSF25-207ENST00000453260 NCBP3Q53F19 620 aaKnown RBP23.64■■□□□ 1.37
TNFRSF25-207ENST00000453260 KSR2Q6VAB6 950 aa23.64■■□□□ 1.37
TNFRSF25-207ENST00000453260 TSR2Q969E8 191 aaKnown RBP23.64■■□□□ 1.37
TNFRSF25-207ENST00000453260 POLLQ9UGP5 575 aa23.64■■□□□ 1.37
TNFRSF25-207ENST00000453260 MAP3K2Q9Y2U5 619 aa23.64■■□□□ 1.37
TNFRSF25-207ENST00000453260 TRPM7Q96QT4 1865 aa23.64■■□□□ 1.37
TNFRSF25-207ENST00000453260 YDJCA8MPS7 323 aa23.63■■□□□ 1.37
TNFRSF25-207ENST00000453260 ANP32CO43423 234 aa23.63■■□□□ 1.37
TNFRSF25-207ENST00000453260 ZC3H12CQ9C0D7 883 aaKnown RBP23.63■■□□□ 1.37
TNFRSF25-207ENST00000453260 DBNDD1Q9H9R9 158 aa23.63■■□□□ 1.37
TNFRSF25-207ENST00000453260 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
TNFRSF25-207ENST00000453260 ANKIB1Q9P2G1 1089 aa23.63■■□□□ 1.37
TNFRSF25-207ENST00000453260 IL16Q14005 1332 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 DUOX1Q9NRD9 1551 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 PI4KAP2A4QPH2 592 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 G3V3G9 751 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 DCAF8Q5TAQ9 597 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 PI4KAP1Q8N8J0 262 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 TBC1D16Q8TBP0 767 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 DPF2Q92785 391 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 SEC31BQ9NQW1 1179 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 PGAP2Q9UHJ9 254 aa23.62■■□□□ 1.37
TNFRSF25-207ENST00000453260 WDR33Q9C0J8 1336 aaKnown RBP23.61■■□□□ 1.37
TNFRSF25-207ENST00000453260 TWISTNBQ3B726 338 aaPredicted RBP23.61■■□□□ 1.37
TNFRSF25-207ENST00000453260 PODXL2Q9NZ53 605 aa23.61■■□□□ 1.37
TNFRSF25-207ENST00000453260 TRAF5O00463 557 aa23.6■■□□□ 1.37
TNFRSF25-207ENST00000453260 PSMD14O00487 310 aa23.6■■□□□ 1.37
TNFRSF25-207ENST00000453260 ECE1P42892 770 aa23.6■■□□□ 1.37
TNFRSF25-207ENST00000453260 MAP2K1Q02750 393 aaPredicted RBP23.6■■□□□ 1.37
TNFRSF25-207ENST00000453260 PAXIP1Q6ZW49 1069 aaPredicted RBP23.6■■□□□ 1.37
TNFRSF25-207ENST00000453260 MICALL2Q8IY33 904 aa23.6■■□□□ 1.37
TNFRSF25-207ENST00000453260 JARID2Q92833 1246 aaPredicted RBP23.6■■□□□ 1.37
TNFRSF25-207ENST00000453260 FOXN1O15353 648 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms