RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 SPECC1Q5M775 1068 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 BBXQ8WY36 941 aaPredicted RBP8.95□□□□□ -0.98
RIF1-206ENST00000453091 TAF4BQ92750 862 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 IFNKQ9P0W0 207 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 RALGAPBQ86X10 1494 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 MCM5P33992 734 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 IFIT5Q13325 482 aaKnown RBP8.95□□□□□ -0.98
RIF1-206ENST00000453091 RHOXF2BP0C7M4 288 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 DNAJC21Q5F1R6 531 aaKnown RBP8.95□□□□□ -0.98
RIF1-206ENST00000453091 RHOXF2Q9BQY4 288 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 LZTFL1Q9NQ48 299 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 CD2BP2O95400 341 aaKnown RBP8.95□□□□□ -0.98
RIF1-206ENST00000453091 STARD3NLO95772 234 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 METAP2P50579 478 aaKnown RBP eCLIP8.95□□□□□ -0.98
RIF1-206ENST00000453091 LDHAL6AQ6ZMR3 332 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 DBF4Q9UBU7 674 aaPredicted RBP8.95□□□□□ -0.98
RIF1-206ENST00000453091 VGLL3A8MV65 326 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 RRAGBQ5VZM2 374 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 LMBR1LQ6UX01 489 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 NFATC2IPQ8NCF5 419 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 LGR6Q9HBX8 967 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 IARSP41252 1262 aaKnown RBP8.95□□□□□ -0.98
RIF1-206ENST00000453091 SPA17Q15506 151 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 PTPN21Q16825 1174 aa8.95□□□□□ -0.98
RIF1-206ENST00000453091 A0A1B0GVL5 298 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
RIF1-206ENST00000453091 LMBRD1Q9NUN5 540 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 PPIP5K1Q6PFW1 1433 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 MYO1BO43795 1136 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 CREB3L3Q68CJ9 461 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 KRT222Q8N1A0 295 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 DHX58Q96C10 678 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 ZKSCAN3Q9BRR0 538 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 TFCP2Q12800 502 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 BMS1Q14692 1282 aaKnown RBP8.94□□□□□ -0.98
RIF1-206ENST00000453091 SMARCC1Q92922 1105 aaPredicted RBP8.94□□□□□ -0.98
RIF1-206ENST00000453091 UIMC1Q96RL1 719 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 TRIM35Q9UPQ4 493 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 IDEP14735 1019 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 SNX14Q9Y5W7 946 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 SYKP43405 635 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 ALG1Q9BT22 464 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 PALD1Q9ULE6 856 aa8.94□□□□□ -0.98
RIF1-206ENST00000453091 MTIF2P46199 727 aaKnown RBP8.93□□□□□ -0.98
RIF1-206ENST00000453091 CACNA2D4Q7Z3S7 1137 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 SHTN1A0MZ66 631 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 MRPS27Q92552 414 aaKnown RBP8.93□□□□□ -0.98
RIF1-206ENST00000453091 WASF1Q92558 559 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 NUP153P49790 1475 aaKnown RBP8.93□□□□□ -0.98
RIF1-206ENST00000453091 PTPDC1A2A3K4 754 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 GSPT1P15170 499 aaKnown RBP8.93□□□□□ -0.98
RIF1-206ENST00000453091 CTR9Q6PD62 1173 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 MAATS1Q7Z4T9 603 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 MIGA1Q8NAN2 632 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 NGLY1Q96IV0 654 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 FAM227BQ96M60 508 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 JADE2Q9NQC1 790 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 IL16Q14005 1332 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 IFNL2Q8IZJ0 200 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 ASXL1Q8IXJ9 1541 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 ANKRD18BA2A2Z9 1011 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 ARHGAP45Q92619 1136 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 PNMA6EA0A0J9YXQ4 647 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 MKNK2Q9HBH9 465 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 PIK3R4Q99570 1358 aa8.93□□□□□ -0.98
RIF1-206ENST00000453091 KCNQ3O43525 872 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 KCNA6P17658 529 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 SF3A3Q12874 501 aaKnown RBP eCLIP8.92□□□□□ -0.98
RIF1-206ENST00000453091 UTP14AQ9BVJ6 771 aaKnown RBP8.92□□□□□ -0.98
RIF1-206ENST00000453091 CALCOCO1Q9P1Z2 691 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 ANKRD36BQ8N2N9 1353 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 CTAGE5O15320 804 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 YEATS4O95619 227 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 VPS18Q9P253 973 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 CEP131Q9UPN4 1083 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 N4BP3O15049 544 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 ANKRD13DQ6ZTN6 518 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 EDC3Q96F86 508 aaKnown RBP8.92□□□□□ -0.98
RIF1-206ENST00000453091 RTL1A6NKG5 1358 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 EXOC5O00471 708 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 ZNF76P36508 570 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 ZNF594Q96JF6 807 aaPredicted RBP8.92□□□□□ -0.98
RIF1-206ENST00000453091 TMCO5BA8MYB1 307 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 GSDMDP57764 484 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 HLTFQ14527 1009 aaKnown RBP eCLIP8.92□□□□□ -0.984e-7■■□□□ 14.4
RIF1-206ENST00000453091 ELF2Q15723 593 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 FAM135AQ9P2D6 1515 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 A0A087WWV3 80 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 KIF2AO00139 706 aaPredicted RBP8.92□□□□□ -0.98
RIF1-206ENST00000453091 PRPF4BQ13523 1007 aaKnown RBP8.92□□□□□ -0.98
RIF1-206ENST00000453091 CCDC102BQ68D86 513 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 ORAI2Q96SN7 254 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 PLEKHA4Q9H4M7 779 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 RNF123Q5XPI4 1314 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 A0A1W2PP64 1363 aa8.92□□□□□ -0.98
RIF1-206ENST00000453091 ZPR1O75312 459 aa8.91□□□□□ -0.98
RIF1-206ENST00000453091 SLU7O95391 586 aaKnown RBP8.91□□□□□ -0.98
RIF1-206ENST00000453091 POLR3AO14802 1390 aaPredicted RBP8.91□□□□□ -0.98
RIF1-206ENST00000453091 DZIP1Q86YF9 867 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms