RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 FKBP4Q02790 459 aaKnown RBP eCLIP11.2□□□□□ -0.62
COL8A1-203ENST00000452013 SUPT20HQ8NEM7 779 aa11.2□□□□□ -0.62
COL8A1-203ENST00000452013 TTLL11Q8NHH1 800 aa11.2□□□□□ -0.62
COL8A1-203ENST00000452013 FRAT1Q92837 279 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-203ENST00000452013 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
COL8A1-203ENST00000452013 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
COL8A1-203ENST00000452013 KIF13BQ9NQT8 1826 aa11.19□□□□□ -0.62
COL8A1-203ENST00000452013 CSF1RP07333 972 aa11.19□□□□□ -0.62
COL8A1-203ENST00000452013 RASSF7Q02833 373 aa11.19□□□□□ -0.62
COL8A1-203ENST00000452013 ZKSCAN2Q63HK3 967 aa11.19□□□□□ -0.62
COL8A1-203ENST00000452013 ANKRD18AQ8IVF6 992 aa11.19□□□□□ -0.62
COL8A1-203ENST00000452013 MPNDQ8N594 471 aa11.19□□□□□ -0.62
COL8A1-203ENST00000452013 CELF1Q92879 486 aaKnown RBP11.19□□□□□ -0.62
COL8A1-203ENST00000452013 CCDC85AQ96PX6 553 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-203ENST00000452013 PSMD1Q99460 953 aa11.19□□□□□ -0.62
COL8A1-203ENST00000452013 VPS33BQ9H267 617 aa11.19□□□□□ -0.62
COL8A1-203ENST00000452013 OLFM4Q6UX06 510 aa11.18□□□□□ -0.62
COL8A1-203ENST00000452013 DPP8Q6V1X1 898 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-203ENST00000452013 ATF7IPQ6VMQ6 1270 aa11.18□□□□□ -0.62
COL8A1-203ENST00000452013 SEC31BQ9NQW1 1179 aa11.18□□□□□ -0.62
COL8A1-203ENST00000452013 UTYO14607 1347 aa11.17□□□□□ -0.62
COL8A1-203ENST00000452013 AFDNP55196 1824 aaKnown RBP11.17□□□□□ -0.62
COL8A1-203ENST00000452013 ANKRD18BA2A2Z9 1011 aa11.17□□□□□ -0.62
COL8A1-203ENST00000452013 MS4A1P11836 297 aa11.17□□□□□ -0.62
COL8A1-203ENST00000452013 IGHMBP2P38935 993 aaKnown RBP11.17□□□□□ -0.62
COL8A1-203ENST00000452013 FOXO4P98177 505 aa11.17□□□□□ -0.62
COL8A1-203ENST00000452013 IFIT5Q13325 482 aaKnown RBP11.17□□□□□ -0.62
COL8A1-203ENST00000452013 CCDC57Q2TAC2 916 aa11.17□□□□□ -0.62
COL8A1-203ENST00000452013 INTS3Q68E01 1043 aaKnown RBP11.17□□□□□ -0.62
COL8A1-203ENST00000452013 DPY19L2Q6NUT2 758 aa11.17□□□□□ -0.62
COL8A1-203ENST00000452013 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
COL8A1-203ENST00000452013 USP44Q9H0E7 712 aa11.17□□□□□ -0.62
COL8A1-203ENST00000452013 GREM2Q9H772 168 aa11.17□□□□□ -0.62
COL8A1-203ENST00000452013 NSFL1CQ9UNZ2 370 aaKnown RBP11.17□□□□□ -0.62
COL8A1-203ENST00000452013 NUP98P52948 1817 aa11.16□□□□□ -0.62
COL8A1-203ENST00000452013 ZC3H4Q9UPT8 1303 aaKnown RBP11.16□□□□□ -0.62
COL8A1-203ENST00000452013 NBPF7P0C2Y1 421 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-203ENST00000452013 ITGA6P23229 1130 aa11.16□□□□□ -0.62
COL8A1-203ENST00000452013 IARSP41252 1262 aaKnown RBP11.16□□□□□ -0.62
COL8A1-203ENST00000452013 JDP2Q8WYK2 163 aa11.16□□□□□ -0.62
COL8A1-203ENST00000452013 YTHDC1Q96MU7 727 aaKnown RBP11.16□□□□□ -0.62
COL8A1-203ENST00000452013 MPHOSPH8Q99549 860 aa11.16□□□□□ -0.62
COL8A1-203ENST00000452013 ZNF277Q9NRM2 450 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-203ENST00000452013 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-203ENST00000452013 CHMP3Q9Y3E7 222 aa11.16□□□□□ -0.62
COL8A1-203ENST00000452013 N4BP2Q86UW6 1770 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-203ENST00000452013 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
COL8A1-203ENST00000452013 KIAA1551Q9HCM1 1747 aa11.15□□□□□ -0.62
COL8A1-203ENST00000452013 GNAI3P08754 354 aa11.15□□□□□ -0.62
COL8A1-203ENST00000452013 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-203ENST00000452013 TRIM27P14373 513 aa11.15□□□□□ -0.62
COL8A1-203ENST00000452013 TAF7LQ5H9L4 462 aa11.15□□□□□ -0.62
COL8A1-203ENST00000452013 ZNF784Q8NCA9 323 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-203ENST00000452013 SUCLG2Q96I99 432 aa11.15□□□□□ -0.62
COL8A1-203ENST00000452013 EYA3Q99504 573 aa11.15□□□□□ -0.62
COL8A1-203ENST00000452013 RTFDC1Q9BY42 306 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-203ENST00000452013 ANKIB1Q9P2G1 1089 aa11.15□□□□□ -0.62
COL8A1-203ENST00000452013 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.62
COL8A1-203ENST00000452013 KDM2BQ8NHM5 1336 aa11.14□□□□□ -0.63
COL8A1-203ENST00000452013 C6orf229H3BNL8 230 aa11.14□□□□□ -0.63
COL8A1-203ENST00000452013 PRELPP51888 382 aa11.14□□□□□ -0.63
COL8A1-203ENST00000452013 EPHA10Q5JZY3 1008 aa11.14□□□□□ -0.63
COL8A1-203ENST00000452013 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
COL8A1-203ENST00000452013 DZIP1LQ8IYY4 767 aaKnown RBP11.14□□□□□ -0.63
COL8A1-203ENST00000452013 LARGE2Q8N3Y3 721 aa11.14□□□□□ -0.63
COL8A1-203ENST00000452013 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-203ENST00000452013 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
COL8A1-203ENST00000452013 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
COL8A1-203ENST00000452013 GPBP1L1Q9HC44 474 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-203ENST00000452013 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 PPIP5K2O43314 1243 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 ATP2B4P23634 1241 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 GPSM2P81274 684 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 WASHC4Q2M389 1173 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 RABL6Q3YEC7 729 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-203ENST00000452013 KAZALD1Q96I82 304 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 ZC3H12CQ9C0D7 883 aaKnown RBP11.13□□□□□ -0.63
COL8A1-203ENST00000452013 BICC1Q9H694 974 aaKnown RBP11.13□□□□□ -0.63
COL8A1-203ENST00000452013 PODXL2Q9NZ53 605 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 MINPP1Q9UNW1 487 aa11.13□□□□□ -0.63
COL8A1-203ENST00000452013 ANKRD31Q8N7Z5 1873 aa11.12□□□□□ -0.63
COL8A1-203ENST00000452013 G3V3G9 751 aa11.12□□□□□ -0.63
COL8A1-203ENST00000452013 EIF6P56537 245 aaKnown RBP11.12□□□□□ -0.63
COL8A1-203ENST00000452013 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
COL8A1-203ENST00000452013 LDHAL6AQ6ZMR3 332 aa11.12□□□□□ -0.63
COL8A1-203ENST00000452013 NIM1KQ8IY84 436 aa11.12□□□□□ -0.63
COL8A1-203ENST00000452013 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
COL8A1-203ENST00000452013 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
COL8A1-203ENST00000452013 CNNM1Q9NRU3 951 aa11.12□□□□□ -0.63
COL8A1-203ENST00000452013 LEMD3Q9Y2U8 911 aa11.12□□□□□ -0.63
COL8A1-203ENST00000452013 ARFGEF2Q9Y6D5 1785 aa11.12□□□□□ -0.63
COL8A1-203ENST00000452013 XDHP47989 1333 aa11.11□□□□□ -0.63
COL8A1-203ENST00000452013 FZD9O00144 591 aa11.11□□□□□ -0.63
COL8A1-203ENST00000452013 KIAA2012Q0VF49 1180 aa11.11□□□□□ -0.63
COL8A1-203ENST00000452013 AOC3Q16853 763 aa11.11□□□□□ -0.63
COL8A1-203ENST00000452013 TMEM57Q8N5G2 664 aa11.11□□□□□ -0.63
COL8A1-203ENST00000452013 POLLQ9UGP5 575 aa11.11□□□□□ -0.63
COL8A1-203ENST00000452013 TNRC6CQ9HCJ0 1690 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms