RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 BEND3Q5T5X7 828 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 SP8Q8IXZ3 490 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 ZNF784Q8NCA9 323 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-212ENST00000451542 SUPT20HQ8NEM7 779 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 BCL2L13Q9BXK5 485 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
SMPD4-212ENST00000451542 ATP6V0A2Q9Y487 856 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 FER1L6Q2WGJ9 1857 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 LAMB2P55268 1798 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
SMPD4-212ENST00000451542 SBF1O95248 1867 aa15.23■□□□□ 0.03
SMPD4-212ENST00000451542 IPO8O15397 1037 aaKnown RBP15.23■□□□□ 0.03
SMPD4-212ENST00000451542 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-212ENST00000451542 CDC5LQ99459 802 aaKnown RBP15.23■□□□□ 0.03
SMPD4-212ENST00000451542 GPBP1L1Q9HC44 474 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-212ENST00000451542 KDM2BQ8NHM5 1336 aa15.22■□□□□ 0.03
SMPD4-212ENST00000451542 CTSWP56202 376 aa15.22■□□□□ 0.03
SMPD4-212ENST00000451542 RPS8P62241 208 aaKnown RBP15.22■□□□□ 0.03
SMPD4-212ENST00000451542 DPY19L2Q6NUT2 758 aa15.22■□□□□ 0.03
SMPD4-212ENST00000451542 JARID2Q92833 1246 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-212ENST00000451542 PSMD1Q99460 953 aa15.22■□□□□ 0.03
SMPD4-212ENST00000451542 PLA2G12BQ9BX93 195 aa15.22■□□□□ 0.03
SMPD4-212ENST00000451542 CCDC88AQ3V6T2 1871 aa15.22■□□□□ 0.03
SMPD4-212ENST00000451542 GRM8O00222 908 aa15.21■□□□□ 0.03
SMPD4-212ENST00000451542 RARSP54136 660 aaKnown RBP15.21■□□□□ 0.03
SMPD4-212ENST00000451542 ANKRD18AQ8IVF6 992 aa15.21■□□□□ 0.03
SMPD4-212ENST00000451542 MPNDQ8N594 471 aa15.21■□□□□ 0.03
SMPD4-212ENST00000451542 JDP2Q8WYK2 163 aa15.21■□□□□ 0.03
SMPD4-212ENST00000451542 VPS33BQ9H267 617 aa15.21■□□□□ 0.03
SMPD4-212ENST00000451542 HDAC5Q9UQL6 1122 aa15.21■□□□□ 0.03
SMPD4-212ENST00000451542 MYH3P11055 1940 aa15.21■□□□□ 0.02
SMPD4-212ENST00000451542 CCT4P50991 539 aaKnown RBP15.2■□□□□ 0.02
SMPD4-212ENST00000451542 DPP8Q6V1X1 898 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-212ENST00000451542 ARHGAP45Q92619 1136 aa15.2■□□□□ 0.02
SMPD4-212ENST00000451542 IARSP41252 1262 aaKnown RBP15.19■□□□□ 0.02
SMPD4-212ENST00000451542 TTLL11Q8NHH1 800 aa15.19■□□□□ 0.02
SMPD4-212ENST00000451542 ZNF526Q8TF50 670 aaPredicted RBP15.19■□□□□ 0.02
SMPD4-212ENST00000451542 CELF1Q92879 486 aaKnown RBP15.19■□□□□ 0.02
SMPD4-212ENST00000451542 NOB1Q9ULX3 412 aaKnown RBP15.19■□□□□ 0.02
SMPD4-212ENST00000451542 DICER1Q9UPY3 1922 aaKnown RBP15.19■□□□□ 0.02
SMPD4-212ENST00000451542 IGHMBP2P38935 993 aaKnown RBP15.18■□□□□ 0.02
SMPD4-212ENST00000451542 OLFM4Q6UX06 510 aa15.18■□□□□ 0.02
SMPD4-212ENST00000451542 CCDC85AQ96PX6 553 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-212ENST00000451542 ZNF277Q9NRM2 450 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-212ENST00000451542 NSFL1CQ9UNZ2 370 aaKnown RBP15.18■□□□□ 0.02
SMPD4-212ENST00000451542 RTL9Q8NET4 1388 aa15.18■□□□□ 0.02
SMPD4-212ENST00000451542 LARGE2Q8N3Y3 721 aa15.17■□□□□ 0.02
SMPD4-212ENST00000451542 MPHOSPH8Q99549 860 aa15.17■□□□□ 0.02
SMPD4-212ENST00000451542 CHMP3Q9Y3E7 222 aa15.17■□□□□ 0.02
SMPD4-212ENST00000451542 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
SMPD4-212ENST00000451542 PPIP5K2O43314 1243 aa15.16■□□□□ 0.02
SMPD4-212ENST00000451542 CSF1RP07333 972 aa15.16■□□□□ 0.02
SMPD4-212ENST00000451542 CASP7P55210 303 aa15.16■□□□□ 0.02
SMPD4-212ENST00000451542 IFIT5Q13325 482 aaKnown RBP15.16■□□□□ 0.02
SMPD4-212ENST00000451542 NIM1KQ8IY84 436 aa15.16■□□□□ 0.02
SMPD4-212ENST00000451542 FRAT1Q92837 279 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-212ENST00000451542 EYA3Q99504 573 aa15.16■□□□□ 0.02
SMPD4-212ENST00000451542 RTFDC1Q9BY42 306 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-212ENST00000451542 GREM2Q9H772 168 aa15.16■□□□□ 0.02
SMPD4-212ENST00000451542 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
SMPD4-212ENST00000451542 ANKIB1Q9P2G1 1089 aa15.16■□□□□ 0.02
SMPD4-212ENST00000451542 GLTPD2A6NH11 291 aa15.15■□□□□ 0.02
SMPD4-212ENST00000451542 ITGA6P23229 1130 aa15.15■□□□□ 0.02
SMPD4-212ENST00000451542 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
SMPD4-212ENST00000451542 CCDC57Q2TAC2 916 aa15.15■□□□□ 0.02
SMPD4-212ENST00000451542 TAF7LQ5H9L4 462 aa15.15■□□□□ 0.02
SMPD4-212ENST00000451542 ZKSCAN2Q63HK3 967 aa15.15■□□□□ 0.02
SMPD4-212ENST00000451542 TAF1P21675 1872 aa15.14■□□□□ 0.01
SMPD4-212ENST00000451542 C6orf229H3BNL8 230 aa15.14■□□□□ 0.01
SMPD4-212ENST00000451542 PRELPP51888 382 aa15.14■□□□□ 0.01
SMPD4-212ENST00000451542 ATF7IPQ6VMQ6 1270 aa15.14■□□□□ 0.01
SMPD4-212ENST00000451542 C16orf71Q8IYS4 520 aaPredicted RBP15.14■□□□□ 0.01
SMPD4-212ENST00000451542 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
SMPD4-212ENST00000451542 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
SMPD4-212ENST00000451542 UTYO14607 1347 aa15.14■□□□□ 0.01
SMPD4-212ENST00000451542 G3V3G9 751 aa15.13■□□□□ 0.01
SMPD4-212ENST00000451542 WASHC4Q2M389 1173 aa15.13■□□□□ 0.01
SMPD4-212ENST00000451542 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
SMPD4-212ENST00000451542 DCAF8Q5TAQ9 597 aa15.13■□□□□ 0.01
SMPD4-212ENST00000451542 LMBR1LQ6UX01 489 aa15.13■□□□□ 0.01
SMPD4-212ENST00000451542 ZC3H12CQ9C0D7 883 aaKnown RBP15.13■□□□□ 0.01
SMPD4-212ENST00000451542 ANKRD2Q9GZV1 360 aa15.13■□□□□ 0.01
SMPD4-212ENST00000451542 GGA1Q9UJY5 639 aa15.13■□□□□ 0.01
SMPD4-212ENST00000451542 XDHP47989 1333 aa15.13■□□□□ 0.01
SMPD4-212ENST00000451542 SNED1Q8TER0 1413 aa15.12■□□□□ 0.01
SMPD4-212ENST00000451542 BCAR3O75815 825 aa15.12■□□□□ 0.01
SMPD4-212ENST00000451542 NBPF7P0C2Y1 421 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-212ENST00000451542 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-212ENST00000451542 MS4A1P11836 297 aa15.12■□□□□ 0.01
SMPD4-212ENST00000451542 FOXO4P98177 505 aa15.12■□□□□ 0.01
SMPD4-212ENST00000451542 KIAA2012Q0VF49 1180 aa15.12■□□□□ 0.01
SMPD4-212ENST00000451542 PODXL2Q9NZ53 605 aa15.12■□□□□ 0.01
SMPD4-212ENST00000451542 LRRC37AA6NMS7 1700 aa15.12■□□□□ 0.01
SMPD4-212ENST00000451542 GOLGB1Q14789 3259 aaKnown RBP15.11■□□□□ 0.01
SMPD4-212ENST00000451542 VEGFAP15692 232 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-212ENST00000451542 ATP2B4P23634 1241 aa15.11■□□□□ 0.01
SMPD4-212ENST00000451542 GPSM2P81274 684 aa15.11■□□□□ 0.01
SMPD4-212ENST00000451542 AOC3Q16853 763 aa15.11■□□□□ 0.01
SMPD4-212ENST00000451542 FTSJ3Q8IY81 847 aaKnown RBP15.11■□□□□ 0.01
SMPD4-212ENST00000451542 USP44Q9H0E7 712 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms