RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CC2D2BQ6DHV5 1058 aa12.42□□□□□ -0.42
USP54-207ENST00000451492 DPP8Q6V1X1 898 aaPredicted RBP12.42□□□□□ -0.42
USP54-207ENST00000451492 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
USP54-207ENST00000451492 PI4KAP1Q8N8J0 262 aa12.42□□□□□ -0.42
USP54-207ENST00000451492 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
USP54-207ENST00000451492 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
USP54-207ENST00000451492 METTL22Q9BUU2 404 aaPredicted RBP12.42□□□□□ -0.42
USP54-207ENST00000451492 CHMP4AQ9BY43 222 aa12.42□□□□□ -0.42
USP54-207ENST00000451492 CWC25Q9NXE8 425 aaPredicted RBP12.42□□□□□ -0.42
USP54-207ENST00000451492 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
USP54-207ENST00000451492 NEXNQ0ZGT2 675 aa12.41□□□□□ -0.42
USP54-207ENST00000451492 FKBP5Q13451 457 aaPredicted RBP12.41□□□□□ -0.42
USP54-207ENST00000451492 CWF19L2Q2TBE0 894 aaKnown RBP12.41□□□□□ -0.42
USP54-207ENST00000451492 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
USP54-207ENST00000451492 KSR2Q6VAB6 950 aa12.41□□□□□ -0.42
USP54-207ENST00000451492 NIM1KQ8IY84 436 aa12.41□□□□□ -0.42
USP54-207ENST00000451492 ZBTB38Q8NAP3 1195 aaPredicted RBP12.41□□□□□ -0.42
USP54-207ENST00000451492 IGKV5-2P06315 115 aa12.4□□□□□ -0.42
USP54-207ENST00000451492 APLP1P51693 650 aa12.4□□□□□ -0.42
USP54-207ENST00000451492 EIF6P56537 245 aaKnown RBP12.4□□□□□ -0.42
USP54-207ENST00000451492 FSTL1Q12841 308 aa12.4□□□□□ -0.42
USP54-207ENST00000451492 FLIIQ13045 1269 aa12.4□□□□□ -0.42
USP54-207ENST00000451492 MPNDQ8N594 471 aa12.4□□□□□ -0.42
USP54-207ENST00000451492 CCDC191Q8NCU4 936 aa12.4□□□□□ -0.42
USP54-207ENST00000451492 MYH16Q9H6N6 1097 aa12.4□□□□□ -0.42
USP54-207ENST00000451492 SEC31BQ9NQW1 1179 aa12.4□□□□□ -0.42
USP54-207ENST00000451492 ADAMTSL1Q8N6G6 1762 aa12.4□□□□□ -0.42
USP54-207ENST00000451492 FZD9O00144 591 aa12.39□□□□□ -0.43
USP54-207ENST00000451492 BBOX1O75936 387 aa12.39□□□□□ -0.43
USP54-207ENST00000451492 PCCAP05165 728 aaPredicted RBP12.39□□□□□ -0.43
USP54-207ENST00000451492 TRIM28Q13263 835 aaKnown RBP12.39□□□□□ -0.43
USP54-207ENST00000451492 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
USP54-207ENST00000451492 SP8Q8IXZ3 490 aa12.39□□□□□ -0.43
USP54-207ENST00000451492 A0A1B0GUL6 1792 aa12.38□□□□□ -0.43
USP54-207ENST00000451492 IQCA1LA6NCM1 817 aa12.38□□□□□ -0.43
USP54-207ENST00000451492 PDE8AO60658 829 aa12.38□□□□□ -0.43
USP54-207ENST00000451492 VAMP4O75379 141 aa12.38□□□□□ -0.43
USP54-207ENST00000451492 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
USP54-207ENST00000451492 GRIPAP1Q4V328 841 aa12.38□□□□□ -0.43
USP54-207ENST00000451492 SUPT20HQ8NEM7 779 aa12.38□□□□□ -0.43
USP54-207ENST00000451492 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
USP54-207ENST00000451492 HACL1Q9UJ83 578 aa12.38□□□□□ -0.43
USP54-207ENST00000451492 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
USP54-207ENST00000451492 NEURL1BA8MQ27 555 aa12.37□□□□□ -0.43
USP54-207ENST00000451492 C6orf229H3BNL8 230 aa12.37□□□□□ -0.43
USP54-207ENST00000451492 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
USP54-207ENST00000451492 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
USP54-207ENST00000451492 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
USP54-207ENST00000451492 GPC2Q8N158 579 aa12.37□□□□□ -0.43
USP54-207ENST00000451492 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
USP54-207ENST00000451492 TAF1DQ9H5J8 278 aaPredicted RBP12.37□□□□□ -0.43
USP54-207ENST00000451492 NSFL1CQ9UNZ2 370 aaKnown RBP12.37□□□□□ -0.43
USP54-207ENST00000451492 F6X3S4 739 aa12.36□□□□□ -0.43
USP54-207ENST00000451492 RAD17O75943 681 aa12.36□□□□□ -0.43
USP54-207ENST00000451492 LMOD1P29536 600 aaPredicted RBP12.36□□□□□ -0.43
USP54-207ENST00000451492 EPHX2P34913 555 aa12.36□□□□□ -0.43
USP54-207ENST00000451492 GPSM2P81274 684 aa12.36□□□□□ -0.43
USP54-207ENST00000451492 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
USP54-207ENST00000451492 DNAAF4Q8WXU2 420 aa12.36□□□□□ -0.43
USP54-207ENST00000451492 PSME4Q14997 1843 aa12.36□□□□□ -0.43
USP54-207ENST00000451492 SCN9AQ15858 1988 aa12.36□□□□□ -0.43
USP54-207ENST00000451492 CDHR2Q9BYE9 1310 aa12.36□□□□□ -0.43
USP54-207ENST00000451492 HSP90B1P14625 803 aaKnown RBP12.35□□□□□ -0.43
USP54-207ENST00000451492 CTSWP56202 376 aa12.35□□□□□ -0.43
USP54-207ENST00000451492 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
USP54-207ENST00000451492 KIAA2012Q0VF49 1180 aa12.35□□□□□ -0.43
USP54-207ENST00000451492 TMC4Q7Z404 712 aa12.35□□□□□ -0.43
USP54-207ENST00000451492 RTFDC1Q9BY42 306 aaPredicted RBP12.35□□□□□ -0.43
USP54-207ENST00000451492 DBNDD1Q9H9R9 158 aa12.35□□□□□ -0.43
USP54-207ENST00000451492 ZNF521Q96K83 1311 aa12.35□□□□□ -0.43
USP54-207ENST00000451492 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 UFL1O94874 794 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 EPS15P42566 896 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 SCNN1DP51172 638 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 SLC4A10Q6U841 1118 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 LDHDQ86WU2 507 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 GREM2Q9H772 168 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 ANKIB1Q9P2G1 1089 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 POLLQ9UGP5 575 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 ZNRF3Q9ULT6 936 aa12.34□□□□□ -0.43
USP54-207ENST00000451492 YDJCA8MPS7 323 aa12.33□□□□□ -0.44
USP54-207ENST00000451492 CXCL9Q07325 125 aa12.33□□□□□ -0.44
USP54-207ENST00000451492 GCKRQ14397 625 aa12.33□□□□□ -0.44
USP54-207ENST00000451492 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
USP54-207ENST00000451492 MAP1SQ66K74 1059 aaPredicted RBP12.33□□□□□ -0.44
USP54-207ENST00000451492 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
USP54-207ENST00000451492 BCL2L13Q9BXK5 485 aa12.33□□□□□ -0.44
USP54-207ENST00000451492 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
USP54-207ENST00000451492 G3V3G9 751 aa12.32□□□□□ -0.44
USP54-207ENST00000451492 ECE2O60344 883 aa12.32□□□□□ -0.44
USP54-207ENST00000451492 GMPSP49915 693 aaPredicted RBP12.32□□□□□ -0.44
USP54-207ENST00000451492 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
USP54-207ENST00000451492 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
USP54-207ENST00000451492 LINS1Q8NG48 757 aa12.32□□□□□ -0.44
USP54-207ENST00000451492 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
USP54-207ENST00000451492 TBC1D16Q8TBP0 767 aa12.32□□□□□ -0.44
USP54-207ENST00000451492 CDCA7LQ96GN5 454 aa12.32□□□□□ -0.44
USP54-207ENST00000451492 EYA3Q99504 573 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms