RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 RTFDC1Q9BY42 306 aaPredicted RBP36.74■■■■□ 3.47
CBX4-202ENST00000448310 HYPKQ9NX55 129 aa36.74■■■■□ 3.47
CBX4-202ENST00000448310 MPNDQ8N594 471 aa36.73■■■■□ 3.47
CBX4-202ENST00000448310 FAM89AQ96GI7 184 aa36.73■■■■□ 3.47
CBX4-202ENST00000448310 VPS33BQ9H267 617 aa36.72■■■■□ 3.47
CBX4-202ENST00000448310 ELL2O00472 640 aaPredicted RBP36.71■■■■□ 3.47
CBX4-202ENST00000448310 RTL5Q5HYW3 569 aaPredicted RBP36.71■■■■□ 3.47
CBX4-202ENST00000448310 IFT57Q9NWB7 429 aa36.71■■■■□ 3.47
CBX4-202ENST00000448310 LRRC37AA6NMS7 1700 aa36.71■■■■□ 3.47
CBX4-202ENST00000448310 ZNRF3Q9ULT6 936 aa36.7■■■■□ 3.47
CBX4-202ENST00000448310 CXCL9Q07325 125 aa36.69■■■■□ 3.46
CBX4-202ENST00000448310 COL4A1P02462 1669 aa36.68■■■■□ 3.46
CBX4-202ENST00000448310 GNAI1P63096 354 aa36.68■■■■□ 3.46
CBX4-202ENST00000448310 DUOX1Q9NRD9 1551 aa36.68■■■■□ 3.46
CBX4-202ENST00000448310 PHAXQ9H814 394 aaKnown RBP36.67■■■■□ 3.46
CBX4-202ENST00000448310 VEGFBP49765 207 aa36.66■■■■□ 3.46
CBX4-202ENST00000448310 KIAA2012Q0VF49 1180 aa36.66■■■■□ 3.46
CBX4-202ENST00000448310 CALD1Q05682 793 aaKnown RBP36.65■■■■□ 3.46
CBX4-202ENST00000448310 FMR1Q06787 632 aaKnown RBP eCLIP36.65■■■■□ 3.46
CBX4-202ENST00000448310 RIC3Q7Z5B4 369 aa36.65■■■■□ 3.46
CBX4-202ENST00000448310 TNS4Q8IZW8 715 aa36.65■■■■□ 3.46
CBX4-202ENST00000448310 CELF1Q92879 486 aaKnown RBP36.65■■■■□ 3.46
CBX4-202ENST00000448310 USP50Q70EL3 339 aaPredicted RBP36.64■■■■□ 3.46
CBX4-202ENST00000448310 GPRC5DQ9NZD1 345 aa36.64■■■■□ 3.46
CBX4-202ENST00000448310 GOLGA2Q08379 1002 aa36.63■■■■□ 3.45
CBX4-202ENST00000448310 SF3B3Q15393 1217 aaKnown RBP36.63■■■■□ 3.45
CBX4-202ENST00000448310 C8orf58Q8NAV2 365 aa36.63■■■■□ 3.45
CBX4-202ENST00000448310 RAD17O75943 681 aa36.62■■■■□ 3.45
CBX4-202ENST00000448310 GMPSP49915 693 aaPredicted RBP36.62■■■■□ 3.45
CBX4-202ENST00000448310 TMC4Q7Z404 712 aa36.62■■■■□ 3.45
CBX4-202ENST00000448310 TRPM7Q96QT4 1865 aa36.61■■■■□ 3.45
CBX4-202ENST00000448310 IRS4O14654 1257 aaPredicted RBP36.61■■■■□ 3.45
CBX4-202ENST00000448310 TRIM28Q13263 835 aaKnown RBP36.61■■■■□ 3.45
CBX4-202ENST00000448310 CCDC184Q52MB2 194 aa36.61■■■■□ 3.45
CBX4-202ENST00000448310 CIAPIN1Q6FI81 312 aa36.61■■■■□ 3.45
CBX4-202ENST00000448310 ADARB2Q9NS39 739 aaKnown RBP36.6■■■■□ 3.45
CBX4-202ENST00000448310 MYD88Q99836 296 aa36.59■■■■□ 3.45
CBX4-202ENST00000448310 ABT1Q9ULW3 272 aaKnown RBP36.59■■■■□ 3.45
CBX4-202ENST00000448310 YDJCA8MPS7 323 aa36.58■■■■□ 3.45
CBX4-202ENST00000448310 DEFB115Q30KQ5 88 aa36.58■■■■□ 3.45
CBX4-202ENST00000448310 NSFL1CQ9UNZ2 370 aaKnown RBP36.58■■■■□ 3.45
CBX4-202ENST00000448310 RASSF10A6NK89 507 aa36.57■■■■□ 3.44
CBX4-202ENST00000448310 TRAF5O00463 557 aa36.57■■■■□ 3.44
CBX4-202ENST00000448310 FOXN1O15353 648 aa36.56■■■■□ 3.44
CBX4-202ENST00000448310 CAPN15O75808 1086 aa36.56■■■■□ 3.44
CBX4-202ENST00000448310 BCL2L13Q9BXK5 485 aa36.56■■■■□ 3.44
CBX4-202ENST00000448310 ZBTB38Q8NAP3 1195 aaPredicted RBP36.55■■■■□ 3.44
CBX4-202ENST00000448310 GPSM2P81274 684 aa36.54■■■■□ 3.44
CBX4-202ENST00000448310 TNIP1Q15025 636 aa36.54■■■■□ 3.44
CBX4-202ENST00000448310 TSPYL6Q8N831 410 aa36.54■■■■□ 3.44
CBX4-202ENST00000448310 WASHC4Q2M389 1173 aa36.53■■■■□ 3.44
CBX4-202ENST00000448310 JARID2Q92833 1246 aaPredicted RBP36.53■■■■□ 3.44
CBX4-202ENST00000448310 RIMBP2O15034 1052 aa36.52■■■■□ 3.44
CBX4-202ENST00000448310 TSR2Q969E8 191 aaKnown RBP36.52■■■■□ 3.44
CBX4-202ENST00000448310 POLLQ9UGP5 575 aa36.52■■■■□ 3.44
CBX4-202ENST00000448310 SHTN1A0MZ66 631 aa36.51■■■■□ 3.44
CBX4-202ENST00000448310 C6orf229H3BNL8 230 aa36.51■■■■□ 3.44
CBX4-202ENST00000448310 CCDC30Q5VVM6 783 aa36.51■■■■□ 3.44
CBX4-202ENST00000448310 DBNDD1Q9H9R9 158 aa36.51■■■■□ 3.44
CBX4-202ENST00000448310 SEC31BQ9NQW1 1179 aa36.51■■■■□ 3.44
CBX4-202ENST00000448310 RPS8P62241 208 aaKnown RBP36.5■■■■□ 3.43
CBX4-202ENST00000448310 CST9Q5W186 159 aa36.5■■■■□ 3.43
CBX4-202ENST00000448310 GPR101Q96P66 508 aaPredicted RBP36.5■■■■□ 3.43
CBX4-202ENST00000448310 CDHR2Q9BYE9 1310 aa36.5■■■■□ 3.43
CBX4-202ENST00000448310 CCDC191Q8NCU4 936 aa36.49■■■■□ 3.43
CBX4-202ENST00000448310 TRPM4Q8TD43 1214 aa36.49■■■■□ 3.43
CBX4-202ENST00000448310 AIDAQ96BJ3 306 aa36.49■■■■□ 3.43
CBX4-202ENST00000448310 WDR33Q9C0J8 1336 aaKnown RBP36.49■■■■□ 3.43
CBX4-202ENST00000448310 HIRAP54198 1017 aaPredicted RBP36.48■■■■□ 3.43
CBX4-202ENST00000448310 METTL22Q9BUU2 404 aaPredicted RBP36.48■■■■□ 3.43
CBX4-202ENST00000448310 CWC25Q9NXE8 425 aaPredicted RBP36.48■■■■□ 3.43
CBX4-202ENST00000448310 CNOT7Q9UIV1 285 aaKnown RBP36.48■■■■□ 3.43
CBX4-202ENST00000448310 ZBTB12Q9Y330 459 aaPredicted RBP36.48■■■■□ 3.43
CBX4-202ENST00000448310 PCCAP05165 728 aaPredicted RBP36.47■■■■□ 3.43
CBX4-202ENST00000448310 CCDC85AQ96PX6 553 aaPredicted RBP36.47■■■■□ 3.43
CBX4-202ENST00000448310 GLIS2Q9BZE0 524 aaPredicted RBP36.47■■■■□ 3.43
CBX4-202ENST00000448310 DDX58O95786 925 aaKnown RBP36.46■■■■□ 3.43
CBX4-202ENST00000448310 PAXIP1Q6ZW49 1069 aaPredicted RBP36.46■■■■□ 3.43
CBX4-202ENST00000448310 WBP1LQ9NX94 342 aa36.46■■■■□ 3.43
CBX4-202ENST00000448310 PSMD14O00487 310 aa36.45■■■■□ 3.43
CBX4-202ENST00000448310 DOK7Q18PE1 504 aa36.45■■■■□ 3.43
CBX4-202ENST00000448310 MICALL2Q8IY33 904 aa36.45■■■■□ 3.43
CBX4-202ENST00000448310 TBC1D16Q8TBP0 767 aa36.45■■■■□ 3.43
CBX4-202ENST00000448310 MAP3K2Q9Y2U5 619 aa36.45■■■■□ 3.43
CBX4-202ENST00000448310 ECE2O60344 883 aa36.43■■■■□ 3.42
CBX4-202ENST00000448310 PDE8AO60658 829 aa36.43■■■■□ 3.42
CBX4-202ENST00000448310 HSP90B1P14625 803 aaKnown RBP36.43■■■■□ 3.42
CBX4-202ENST00000448310 GRM1Q13255 1194 aa36.43■■■■□ 3.42
CBX4-202ENST00000448310 EYA3Q99504 573 aa36.43■■■■□ 3.42
CBX4-202ENST00000448310 KCNQ5Q9NR82 932 aa36.43■■■■□ 3.42
CBX4-202ENST00000448310 PGAP2Q9UHJ9 254 aa36.43■■■■□ 3.42
CBX4-202ENST00000448310 SCN9AQ15858 1988 aa36.43■■■■□ 3.42
CBX4-202ENST00000448310 CTCFP49711 727 aaPredicted RBP36.42■■■■□ 3.42
CBX4-202ENST00000448310 CCDC152Q4G0S7 254 aa36.42■■■■□ 3.42
CBX4-202ENST00000448310 CYP4F22Q6NT55 531 aa36.42■■■■□ 3.42
CBX4-202ENST00000448310 WWC1Q8IX03 1113 aa36.42■■■■□ 3.42
CBX4-202ENST00000448310 CAPNS2Q96L46 248 aa36.42■■■■□ 3.42
CBX4-202ENST00000448310 CHMP4AQ9BY43 222 aa36.42■■■■□ 3.42
CBX4-202ENST00000448310 H7C1D1 291 aa36.41■■■■□ 3.42
CBX4-202ENST00000448310 TLL2Q9Y6L7 1015 aa36.41■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms