RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
NPIPB3-202ENST00000448012 ZBTB38Q8NAP3 1195 aaPredicted RBP14.06□□□□□ -0.16
NPIPB3-202ENST00000448012 TAF1DQ9H5J8 278 aaPredicted RBP14.06□□□□□ -0.16
NPIPB3-202ENST00000448012 ZNF541Q9H0D2 1346 aa14.06□□□□□ -0.16
NPIPB3-202ENST00000448012 CACNA1SQ13698 1873 aa14.06□□□□□ -0.16
NPIPB3-202ENST00000448012 WDR90Q96KV7 1748 aa14.05□□□□□ -0.16
NPIPB3-202ENST00000448012 POTECB2RU33 542 aa14.05□□□□□ -0.16
NPIPB3-202ENST00000448012 EPHX2P34913 555 aa14.05□□□□□ -0.16
NPIPB3-202ENST00000448012 SF3B3Q15393 1217 aaKnown RBP14.05□□□□□ -0.16
NPIPB3-202ENST00000448012 AOC3Q16853 763 aa14.04□□□□□ -0.16
NPIPB3-202ENST00000448012 CCDC152Q4G0S7 254 aa14.04□□□□□ -0.16
NPIPB3-202ENST00000448012 KSR2Q6VAB6 950 aa14.04□□□□□ -0.16
NPIPB3-202ENST00000448012 TSPYL6Q8N831 410 aa14.04□□□□□ -0.16
NPIPB3-202ENST00000448012 METTL22Q9BUU2 404 aaPredicted RBP14.04□□□□□ -0.16
NPIPB3-202ENST00000448012 MYH16Q9H6N6 1097 aa14.04□□□□□ -0.16
NPIPB3-202ENST00000448012 MAP3K2Q9Y2U5 619 aa14.04□□□□□ -0.16
NPIPB3-202ENST00000448012 G3V3G9 751 aa14.03□□□□□ -0.16
NPIPB3-202ENST00000448012 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
NPIPB3-202ENST00000448012 PCCAP05165 728 aaPredicted RBP14.03□□□□□ -0.16
NPIPB3-202ENST00000448012 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
NPIPB3-202ENST00000448012 KLRG1Q96E93 195 aa14.03□□□□□ -0.16
NPIPB3-202ENST00000448012 EYA3Q99504 573 aa14.03□□□□□ -0.16
NPIPB3-202ENST00000448012 ZNRF3Q9ULT6 936 aa14.03□□□□□ -0.16
NPIPB3-202ENST00000448012 NSFL1CQ9UNZ2 370 aaKnown RBP14.03□□□□□ -0.16
NPIPB3-202ENST00000448012 CCDC88AQ3V6T2 1871 aa14.02□□□□□ -0.16
NPIPB3-202ENST00000448012 PI4KAP2A4QPH2 592 aa14.02□□□□□ -0.17
NPIPB3-202ENST00000448012 C6orf229H3BNL8 230 aa14.02□□□□□ -0.17
NPIPB3-202ENST00000448012 PDE8AO60658 829 aa14.02□□□□□ -0.17
NPIPB3-202ENST00000448012 RPS8P62241 208 aaKnown RBP14.02□□□□□ -0.17
NPIPB3-202ENST00000448012 TNIP1Q15025 636 aa14.02□□□□□ -0.17
NPIPB3-202ENST00000448012 PI4KAP1Q8N8J0 262 aa14.02□□□□□ -0.17
NPIPB3-202ENST00000448012 RTFDC1Q9BY42 306 aaPredicted RBP14.02□□□□□ -0.17
NPIPB3-202ENST00000448012 DICER1Q9UPY3 1922 aaKnown RBP14.02□□□□□ -0.17
NPIPB3-202ENST00000448012 ANKRD36CQ5JPF3 1778 aa14.01□□□□□ -0.17
NPIPB3-202ENST00000448012 FANCIQ9NVI1 1328 aa14.01□□□□□ -0.17
NPIPB3-202ENST00000448012 HTRA3P83110 453 aa14.01□□□□□ -0.17
NPIPB3-202ENST00000448012 KIAA2012Q0VF49 1180 aa14.01□□□□□ -0.17
NPIPB3-202ENST00000448012 FKBP5Q13451 457 aaPredicted RBP14.01□□□□□ -0.17
NPIPB3-202ENST00000448012 BCL2L13Q9BXK5 485 aa14.01□□□□□ -0.17
NPIPB3-202ENST00000448012 SNED1Q8TER0 1413 aa14□□□□□ -0.17
NPIPB3-202ENST00000448012 WASHC4Q2M389 1173 aa14□□□□□ -0.17
NPIPB3-202ENST00000448012 CIAPIN1Q6FI81 312 aa14□□□□□ -0.17
NPIPB3-202ENST00000448012 DNAJC5GQ8N7S2 189 aa14□□□□□ -0.17
NPIPB3-202ENST00000448012 CELF1Q92879 486 aaKnown RBP14□□□□□ -0.17
NPIPB3-202ENST00000448012 CDC5LQ99459 802 aaKnown RBP14□□□□□ -0.17
NPIPB3-202ENST00000448012 ANKIB1Q9P2G1 1089 aa14□□□□□ -0.17
NPIPB3-202ENST00000448012 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
NPIPB3-202ENST00000448012 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
NPIPB3-202ENST00000448012 USP50Q70EL3 339 aaPredicted RBP13.99□□□□□ -0.17
NPIPB3-202ENST00000448012 ANKRD18AQ8IVF6 992 aa13.99□□□□□ -0.17
NPIPB3-202ENST00000448012 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
NPIPB3-202ENST00000448012 CDHR2Q9BYE9 1310 aa13.98□□□□□ -0.17
NPIPB3-202ENST00000448012 EXOSC9Q06265 439 aaKnown RBP13.98□□□□□ -0.17
NPIPB3-202ENST00000448012 FLIIQ13045 1269 aa13.98□□□□□ -0.17
NPIPB3-202ENST00000448012 ZC3H12CQ9C0D7 883 aaKnown RBP13.98□□□□□ -0.17
NPIPB3-202ENST00000448012 H7C1D1 291 aa13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 RIMBP2O15034 1052 aa13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 CTSWP56202 376 aa13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 CXCL9Q07325 125 aa13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 PPP4R3CPQ6ZMV5 832 aa13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 CNTROBQ8N137 903 aa13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 DNAAF4Q8WXU2 420 aa13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 JARID2Q92833 1246 aaPredicted RBP13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 CCDC85AQ96PX6 553 aaPredicted RBP13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 ADARB2Q9NS39 739 aaKnown RBP13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 GGA1Q9UJY5 639 aa13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 SCN4AP35499 1836 aa13.97□□□□□ -0.17
NPIPB3-202ENST00000448012 TMEM88BA6NKF7 163 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 RAD17O75943 681 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 UFL1O94874 794 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 EPS15P42566 896 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 GMPSP49915 693 aaPredicted RBP13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 SCNN1DP51172 638 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 GPSM2P81274 684 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 MAP1SQ66K74 1059 aaPredicted RBP13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 SLC51AQ86UW1 340 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 JMYQ8N9B5 988 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 GPRC5DQ9NZD1 345 aa13.96□□□□□ -0.17
NPIPB3-202ENST00000448012 NEURL1BA8MQ27 555 aa13.95□□□□□ -0.18
NPIPB3-202ENST00000448012 VAMP4O75379 141 aa13.95□□□□□ -0.18
NPIPB3-202ENST00000448012 IGKV5-2P06315 115 aa13.95□□□□□ -0.18
NPIPB3-202ENST00000448012 CWF19L2Q2TBE0 894 aaKnown RBP13.95□□□□□ -0.18
NPIPB3-202ENST00000448012 G2E3Q7L622 706 aa13.95□□□□□ -0.18
NPIPB3-202ENST00000448012 UBE3BQ7Z3V4 1068 aa13.95□□□□□ -0.18
NPIPB3-202ENST00000448012 LINS1Q8NG48 757 aa13.95□□□□□ -0.18
NPIPB3-202ENST00000448012 ATP2B4P23634 1241 aa13.94□□□□□ -0.18
NPIPB3-202ENST00000448012 IGHMBP2P38935 993 aaKnown RBP13.94□□□□□ -0.18
NPIPB3-202ENST00000448012 TBC1D16Q8TBP0 767 aa13.94□□□□□ -0.18
NPIPB3-202ENST00000448012 DBNDD1Q9H9R9 158 aa13.94□□□□□ -0.18
NPIPB3-202ENST00000448012 PODXL2Q9NZ53 605 aa13.94□□□□□ -0.18
NPIPB3-202ENST00000448012 MKRN1Q9UHC7 482 aaKnown RBP13.94□□□□□ -0.18
NPIPB3-202ENST00000448012 XDHP47989 1333 aa13.93□□□□□ -0.18
NPIPB3-202ENST00000448012 RPS12P25398 132 aaKnown RBP13.93□□□□□ -0.18
NPIPB3-202ENST00000448012 GCKRQ14397 625 aa13.93□□□□□ -0.18
NPIPB3-202ENST00000448012 DOK7Q18PE1 504 aa13.93□□□□□ -0.18
NPIPB3-202ENST00000448012 POLLQ9UGP5 575 aa13.93□□□□□ -0.18
NPIPB3-202ENST00000448012 ABT1Q9ULW3 272 aaKnown RBP13.93□□□□□ -0.18
NPIPB3-202ENST00000448012 PASKQ96RG2 1323 aa13.92□□□□□ -0.18
NPIPB3-202ENST00000448012 H7C1W4 665 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms