RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 NBPF7P0C2Y1 421 aaPredicted RBP19.77■□□□□ 0.75
PMS1-213ENST00000441310 CPA1P15085 419 aa19.77■□□□□ 0.75
PMS1-213ENST00000441310 FAM173BQ6P4H8 233 aa19.77■□□□□ 0.75
PMS1-213ENST00000441310 UNC5CLQ8IV45 518 aa19.77■□□□□ 0.75
PMS1-213ENST00000441310 CCDC83Q8IWF9 413 aa19.77■□□□□ 0.75
PMS1-213ENST00000441310 CCDC171Q6TFL3 1326 aa19.77■□□□□ 0.75
PMS1-213ENST00000441310 FAM193AP78312 1265 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 GJB2P29033 226 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 FERMT3Q86UX7 667 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 C10orf67Q8IYJ2 551 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 SYTL4Q96C24 671 aaPredicted RBP19.76■□□□□ 0.75
PMS1-213ENST00000441310 DNAJC25Q9H1X3 360 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 FHOD1Q9Y613 1164 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 SKILP12757 684 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 SLFNL1Q499Z3 407 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 LRRC8AQ8IWT6 810 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 DACT1Q9NYF0 836 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 MTMR6Q9Y217 621 aa19.76■□□□□ 0.75
PMS1-213ENST00000441310 LARGE1O95461 756 aa19.75■□□□□ 0.75
PMS1-213ENST00000441310 SYT10Q6XYQ8 523 aa19.75■□□□□ 0.75
PMS1-213ENST00000441310 TTC6Q86TZ1 520 aa19.75■□□□□ 0.75
PMS1-213ENST00000441310 ZNF165P49910 485 aa19.75■□□□□ 0.75
PMS1-213ENST00000441310 KRBA2Q6ZNG9 492 aa19.75■□□□□ 0.75
PMS1-213ENST00000441310 RUFY3Q7L099 469 aa19.75■□□□□ 0.75
PMS1-213ENST00000441310 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.75■□□□□ 0.75
PMS1-213ENST00000441310 PIP4K2AP48426 406 aaPredicted RBP19.74■□□□□ 0.75
PMS1-213ENST00000441310 CLCN6P51797 869 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 ATP8B2P98198 1209 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 NYAP1Q6ZVC0 841 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 FILIP1Q7Z7B0 1213 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 LRRN4CLQ8ND94 238 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 RASSF4Q9H2L5 321 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 PLA2G4AP47712 749 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 BABAM1Q9NWV8 329 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 LIMCH1Q9UPQ0 1083 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 TRIM66O15016 1216 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 PNMA6AP0CW24 399 aaPredicted RBP19.74■□□□□ 0.75
PMS1-213ENST00000441310 DNAAF4Q8WXU2 420 aa19.74■□□□□ 0.75
PMS1-213ENST00000441310 PPP1R42Q7Z4L9 355 aa19.73■□□□□ 0.75
PMS1-213ENST00000441310 GOLGA6L4A6NEF3 574 aa19.73■□□□□ 0.75
PMS1-213ENST00000441310 MAP4K4O95819 1239 aaPredicted RBP19.73■□□□□ 0.75
PMS1-213ENST00000441310 HSPA4P34932 840 aa19.73■□□□□ 0.75
PMS1-213ENST00000441310 TEX35Q5T0J7 233 aa19.73■□□□□ 0.75
PMS1-213ENST00000441310 NFATC2IPQ8NCF5 419 aa19.73■□□□□ 0.75
PMS1-213ENST00000441310 LRRCC1Q9C099 1032 aa19.73■□□□□ 0.75
PMS1-213ENST00000441310 SURF6O75683 361 aaKnown RBP19.72■□□□□ 0.75
PMS1-213ENST00000441310 GIGYF1O75420 1035 aaPredicted RBP19.72■□□□□ 0.75
PMS1-213ENST00000441310 TDRD7Q8NHU6 1098 aaKnown RBP19.72■□□□□ 0.75
PMS1-213ENST00000441310 GYS2P54840 703 aa19.72■□□□□ 0.75
PMS1-213ENST00000441310 CADPS2Q86UW7 1296 aa19.72■□□□□ 0.75
PMS1-213ENST00000441310 SRGAP3O43295 1099 aa19.71■□□□□ 0.75
PMS1-213ENST00000441310 H2AFXP16104 143 aaPredicted RBP19.71■□□□□ 0.75
PMS1-213ENST00000441310 ST5P78524 1137 aa19.71■□□□□ 0.75
PMS1-213ENST00000441310 CWF19L2Q2TBE0 894 aaKnown RBP19.71■□□□□ 0.75
PMS1-213ENST00000441310 NUTM1Q86Y26 1132 aa19.71■□□□□ 0.75
PMS1-213ENST00000441310 TEX2Q8IWB9 1127 aa19.71■□□□□ 0.75
PMS1-213ENST00000441310 USP16Q9Y5T5 823 aa19.71■□□□□ 0.75
PMS1-213ENST00000441310 SECISBP2LQ93073 1101 aaKnown RBP19.71■□□□□ 0.75
PMS1-213ENST00000441310 MAP3K2Q9Y2U5 619 aa19.71■□□□□ 0.75
PMS1-213ENST00000441310 SNX14Q9Y5W7 946 aa19.71■□□□□ 0.75
PMS1-213ENST00000441310 CCDC69A6NI79 296 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 MYL6BP14649 208 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 ARHGAP29Q52LW3 1261 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 GORABQ5T7V8 394 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 RASEFQ8IZ41 740 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 EFCC1Q9HA90 598 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 LCMT1Q9UIC8 334 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 LRRC37A3O60309 1634 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 MST1RQ04912 1400 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 TATP17735 454 aaPredicted RBP19.7■□□□□ 0.74
PMS1-213ENST00000441310 TTC14Q96N46 770 aa19.7■□□□□ 0.74
PMS1-213ENST00000441310 KRT85P78386 507 aa19.69■□□□□ 0.74
PMS1-213ENST00000441310 BEND3Q5T5X7 828 aa19.69■□□□□ 0.74
PMS1-213ENST00000441310 SMARCE1Q969G3 411 aa19.69■□□□□ 0.74
PMS1-213ENST00000441310 ZCCHC17Q9NP64 241 aaKnown RBP19.69■□□□□ 0.74
PMS1-213ENST00000441310 TFIP11Q9UBB9 837 aaKnown RBP19.69■□□□□ 0.74
PMS1-213ENST00000441310 DBF4Q9UBU7 674 aaPredicted RBP19.69■□□□□ 0.74
PMS1-213ENST00000441310 RNF20Q5VTR2 975 aa19.69■□□□□ 0.74
PMS1-213ENST00000441310 CCAR2Q8N163 923 aaKnown RBP19.69■□□□□ 0.74
PMS1-213ENST00000441310 TXLNBQ8N3L3 684 aa19.69■□□□□ 0.74
PMS1-213ENST00000441310 CCDC191Q8NCU4 936 aa19.69■□□□□ 0.74
PMS1-213ENST00000441310 USP54Q70EL1 1684 aa19.69■□□□□ 0.74
PMS1-213ENST00000441310 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
PMS1-213ENST00000441310 RGPD5Q99666 1765 aa19.69■□□□□ 0.74
PMS1-213ENST00000441310 GOLGA6L19H0YKK7 550 aa19.68■□□□□ 0.74
PMS1-213ENST00000441310 DDX54Q8TDD1 881 aaKnown RBP19.68■□□□□ 0.74
PMS1-213ENST00000441310 MYO1CO00159 1063 aa19.68■□□□□ 0.74
PMS1-213ENST00000441310 CASTP20810 708 aaKnown RBP19.68■□□□□ 0.74
PMS1-213ENST00000441310 KLHL34Q8N239 644 aa19.68■□□□□ 0.74
PMS1-213ENST00000441310 C9orf78Q9NZ63 289 aaPredicted RBP19.68■□□□□ 0.74
PMS1-213ENST00000441310 DHX16O60231 1041 aaKnown RBP19.67■□□□□ 0.74
PMS1-213ENST00000441310 TPM4P67936 248 aa19.67■□□□□ 0.74
PMS1-213ENST00000441310 NECAB1Q8N987 351 aa19.67■□□□□ 0.74
PMS1-213ENST00000441310 GTF2A1P52655 376 aaPredicted RBP19.66■□□□□ 0.74
PMS1-213ENST00000441310 TMCO3Q6UWJ1 677 aa19.66■□□□□ 0.74
PMS1-213ENST00000441310 SEC31AO94979 1220 aaKnown RBP19.66■□□□□ 0.74
PMS1-213ENST00000441310 NOP2P46087 812 aaKnown RBP19.66■□□□□ 0.74
PMS1-213ENST00000441310 SALL3Q9BXA9 1300 aa19.66■□□□□ 0.74
PMS1-213ENST00000441310 ADCY9O60503 1353 aa19.66■□□□□ 0.74
PMS1-213ENST00000441310 SLIT3O75094 1523 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms